RNA–Protein interactions for RNA: ENST00000556336.5

RPGRIP1-210, Transcript of RPGR interacting protein 1, humanhuman

TSL 5 BASIC

Gene RPGRIP1, Length 2,955 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-210ENST00000556336 SGSM3Q96HU1 749 aa17.4■□□□□ 0.38
RPGRIP1-210ENST00000556336 GREM2Q9H772 168 aa17.4■□□□□ 0.38
RPGRIP1-210ENST00000556336 IL6STP40189 918 aaPredicted RBP17.4■□□□□ 0.38
RPGRIP1-210ENST00000556336 PKP1Q13835 747 aa17.4■□□□□ 0.38
RPGRIP1-210ENST00000556336 PRPF40BQ6NWY9 871 aaKnown RBP17.4■□□□□ 0.38
RPGRIP1-210ENST00000556336 TNPO1Q92973 898 aaKnown RBP17.4■□□□□ 0.38
RPGRIP1-210ENST00000556336 PRDM16Q9HAZ2 1276 aa17.4■□□□□ 0.38
RPGRIP1-210ENST00000556336 CCDC87Q9NVE4 849 aa17.4■□□□□ 0.38
RPGRIP1-210ENST00000556336 RAD50Q92878 1312 aa17.4■□□□□ 0.38
RPGRIP1-210ENST00000556336 SLIT2O94813 1529 aa17.39■□□□□ 0.37
RPGRIP1-210ENST00000556336 IRS4O14654 1257 aaPredicted RBP17.39■□□□□ 0.37
RPGRIP1-210ENST00000556336 IL15P40933 162 aaPredicted RBP17.39■□□□□ 0.37
RPGRIP1-210ENST00000556336 IFIT5Q13325 482 aaKnown RBP17.39■□□□□ 0.37
RPGRIP1-210ENST00000556336 RUFY2Q8WXA3 655 aa17.39■□□□□ 0.37
RPGRIP1-210ENST00000556336 USP21Q9UK80 565 aa17.39■□□□□ 0.37
RPGRIP1-210ENST00000556336 SNX14Q9Y5W7 946 aa17.39■□□□□ 0.37
RPGRIP1-210ENST00000556336 UBN2Q6ZU65 1347 aa17.39■□□□□ 0.37
RPGRIP1-210ENST00000556336 COL15A1P39059 1388 aa17.39■□□□□ 0.37
RPGRIP1-210ENST00000556336 HCLS1P14317 486 aaPredicted RBP17.39■□□□□ 0.37
RPGRIP1-210ENST00000556336 ATP5JP18859 108 aa17.39■□□□□ 0.37
RPGRIP1-210ENST00000556336 TDO2P48775 406 aa17.39■□□□□ 0.37
RPGRIP1-210ENST00000556336 SEC62Q99442 399 aaKnown RBP17.39■□□□□ 0.37
RPGRIP1-210ENST00000556336 A0A1B0GUL7 405 aa17.38■□□□□ 0.37
RPGRIP1-210ENST00000556336 TMX3Q96JJ7 454 aa17.38■□□□□ 0.37
RPGRIP1-210ENST00000556336 PALLDQ8WX93 1383 aa17.38■□□□□ 0.37
RPGRIP1-210ENST00000556336 SSFA2P28290 1259 aa17.38■□□□□ 0.37
RPGRIP1-210ENST00000556336 GTF2F1P35269 517 aaKnown RBP eCLIP17.38■□□□□ 0.37
RPGRIP1-210ENST00000556336 GYS2P54840 703 aa17.38■□□□□ 0.37
RPGRIP1-210ENST00000556336 EIF5P55010 431 aaKnown RBP17.38■□□□□ 0.37
RPGRIP1-210ENST00000556336 KIAA2012Q0VF49 1180 aa17.38■□□□□ 0.37
RPGRIP1-210ENST00000556336 FOXD4L5Q5VV16 416 aaPredicted RBP17.38■□□□□ 0.37
RPGRIP1-210ENST00000556336 ZNF589Q86UQ0 364 aaPredicted RBP17.38■□□□□ 0.37
RPGRIP1-210ENST00000556336 TTLL11Q8NHH1 800 aa17.38■□□□□ 0.37
RPGRIP1-210ENST00000556336 FOXD4L4Q8WXT5 416 aaPredicted RBP17.38■□□□□ 0.37
RPGRIP1-210ENST00000556336 SNRKQ9NRH2 765 aa17.38■□□□□ 0.37
RPGRIP1-210ENST00000556336 CEP126Q9P2H0 1117 aa17.38■□□□□ 0.37
RPGRIP1-210ENST00000556336 ITGA6P23229 1130 aa17.37■□□□□ 0.37
RPGRIP1-210ENST00000556336 NUP188Q5SRE5 1749 aa17.37■□□□□ 0.37
RPGRIP1-210ENST00000556336 BCL9LQ86UU0 1499 aa17.37■□□□□ 0.37
RPGRIP1-210ENST00000556336 ADORA1P30542 326 aa17.37■□□□□ 0.37
RPGRIP1-210ENST00000556336 RAD51AP2Q09MP3 1159 aa17.37■□□□□ 0.37
RPGRIP1-210ENST00000556336 SKOR2Q2VWA4 1001 aaPredicted RBP17.37■□□□□ 0.37
RPGRIP1-210ENST00000556336 ADCK5Q3MIX3 580 aa17.37■□□□□ 0.37
RPGRIP1-210ENST00000556336 CCDC129Q6ZRS4 1044 aa17.37■□□□□ 0.37
RPGRIP1-210ENST00000556336 RASSF4Q9H2L5 321 aa17.37■□□□□ 0.37
RPGRIP1-210ENST00000556336 COL9A3Q14050 684 aaPredicted RBP17.37■□□□□ 0.37
RPGRIP1-210ENST00000556336 LDHAL6AQ6ZMR3 332 aa17.37■□□□□ 0.37
RPGRIP1-210ENST00000556336 FAM212AQ96EL1 285 aa17.37■□□□□ 0.37
RPGRIP1-210ENST00000556336 ANAPC15P60006 121 aa17.36■□□□□ 0.37
RPGRIP1-210ENST00000556336 SUSD4Q5VX71 490 aa17.36■□□□□ 0.37
RPGRIP1-210ENST00000556336 AK9Q5TCS8 1911 aa17.36■□□□□ 0.37
RPGRIP1-210ENST00000556336 DOT1LQ8TEK3 1739 aa17.36■□□□□ 0.37
RPGRIP1-210ENST00000556336 HNRNPH2P55795 449 aaKnown RBP17.36■□□□□ 0.37
RPGRIP1-210ENST00000556336 VPS72Q15906 364 aa17.36■□□□□ 0.37
RPGRIP1-210ENST00000556336 FKBP4Q02790 459 aaKnown RBP eCLIP17.35■□□□□ 0.37
RPGRIP1-210ENST00000556336 GORABQ5T7V8 394 aa17.35■□□□□ 0.37
RPGRIP1-210ENST00000556336 MEX3CQ5U5Q3 659 aaKnown RBP17.35■□□□□ 0.37
RPGRIP1-210ENST00000556336 CCDC39Q9UFE4 941 aa17.35■□□□□ 0.37
RPGRIP1-210ENST00000556336 JCADQ9P266 1359 aa17.35■□□□□ 0.37
RPGRIP1-210ENST00000556336 CSF1RP07333 972 aa17.35■□□□□ 0.37
RPGRIP1-210ENST00000556336 HELBQ8NG08 1087 aaPredicted RBP17.35■□□□□ 0.37
RPGRIP1-210ENST00000556336 CALR3Q96L12 384 aaKnown RBP17.35■□□□□ 0.37
RPGRIP1-210ENST00000556336 TAF6LQ9Y6J9 622 aa17.35■□□□□ 0.37
RPGRIP1-210ENST00000556336 CASTP20810 708 aaKnown RBP17.34■□□□□ 0.37
RPGRIP1-210ENST00000556336 CTSWP56202 376 aa17.34■□□□□ 0.37
RPGRIP1-210ENST00000556336 RBM8AQ9Y5S9 174 aaKnown RBP17.34■□□□□ 0.37
RPGRIP1-210ENST00000556336 RAB3GAP1Q15042 981 aa17.34■□□□□ 0.37
RPGRIP1-210ENST00000556336 CHAMP1Q96JM3 812 aa17.34■□□□□ 0.37
RPGRIP1-210ENST00000556336 HAUS7Q99871 368 aa17.34■□□□□ 0.37
RPGRIP1-210ENST00000556336 CNNM1Q9NRU3 951 aa17.34■□□□□ 0.37
RPGRIP1-210ENST00000556336 CCDC171Q6TFL3 1326 aa17.34■□□□□ 0.37
RPGRIP1-210ENST00000556336 TJP1Q07157 1748 aa17.34■□□□□ 0.37
RPGRIP1-210ENST00000556336 NRAPQ86VF7 1730 aa17.34■□□□□ 0.37
RPGRIP1-210ENST00000556336 SNAP23O00161 211 aa17.34■□□□□ 0.37
RPGRIP1-210ENST00000556336 BICDL1Q6ZP65 573 aa17.34■□□□□ 0.37
RPGRIP1-210ENST00000556336 ZNF34Q8IZ26 560 aa17.34■□□□□ 0.37
RPGRIP1-210ENST00000556336 JAKMIP1Q96N16 626 aaKnown RBP17.34■□□□□ 0.37
RPGRIP1-210ENST00000556336 ERVV-1B6SEH8 477 aa17.33■□□□□ 0.37
RPGRIP1-210ENST00000556336 GUCY2CP25092 1073 aa17.33■□□□□ 0.37
RPGRIP1-210ENST00000556336 HSPA1LP34931 641 aa17.33■□□□□ 0.37
RPGRIP1-210ENST00000556336 METTL24Q5JXM2 366 aa17.33■□□□□ 0.37
RPGRIP1-210ENST00000556336 PI16Q6UXB8 463 aa17.33■□□□□ 0.37
RPGRIP1-210ENST00000556336 DRC1Q96MC2 740 aa17.33■□□□□ 0.37
RPGRIP1-210ENST00000556336 NIP7Q9Y221 180 aaKnown RBP eCLIP17.33■□□□□ 0.37
RPGRIP1-210ENST00000556336 IFIT1P09914 478 aaKnown RBP17.33■□□□□ 0.36
RPGRIP1-210ENST00000556336 FNBP4Q8N3X1 1017 aaPredicted RBP17.33■□□□□ 0.36
RPGRIP1-210ENST00000556336 LINC00116Q8NCU8 138 aa17.33■□□□□ 0.36
RPGRIP1-210ENST00000556336 XAGE2Q96GT9 111 aa17.33■□□□□ 0.36
RPGRIP1-210ENST00000556336 TCEANC2Q96MN5 208 aa17.33■□□□□ 0.36
RPGRIP1-210ENST00000556336 CTR9Q6PD62 1173 aa17.32■□□□□ 0.36
RPGRIP1-210ENST00000556336 CAMTA2O94983 1202 aa17.32■□□□□ 0.36
RPGRIP1-210ENST00000556336 PLA2G12BQ9BX93 195 aa17.32■□□□□ 0.36
RPGRIP1-210ENST00000556336 PAG1Q9NWQ8 432 aa17.32■□□□□ 0.36
RPGRIP1-210ENST00000556336 CIZ1Q9ULV3 898 aaPredicted RBP17.32■□□□□ 0.36
RPGRIP1-210ENST00000556336 ANKRD18BA2A2Z9 1011 aa17.31■□□□□ 0.36
RPGRIP1-210ENST00000556336 HIP1O00291 1037 aa17.31■□□□□ 0.36
RPGRIP1-210ENST00000556336 CIAO1O76071 339 aa17.31■□□□□ 0.36
RPGRIP1-210ENST00000556336 SCARF1Q14162 830 aa17.31■□□□□ 0.36
RPGRIP1-210ENST00000556336 NECTIN1Q15223 517 aa17.31■□□□□ 0.36
RPGRIP1-210ENST00000556336 PDLIM2Q96JY6 352 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms