RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 KLHDC7BQ96G42 594 aa7.99□□□□□ -1.13
SCFD1-218ENST00000556256 EPHA1P21709 976 aa7.98□□□□□ -1.13
SCFD1-218ENST00000556256 TTC39BQ5VTQ0 682 aaPredicted RBP7.98□□□□□ -1.13
SCFD1-218ENST00000556256 FAM117BQ6P1L5 589 aa7.98□□□□□ -1.13
SCFD1-218ENST00000556256 SHKBP1Q8TBC3 707 aa7.98□□□□□ -1.13
SCFD1-218ENST00000556256 UBASH3BQ8TF42 649 aa7.98□□□□□ -1.13
SCFD1-218ENST00000556256 PBX4Q9BYU1 374 aa7.98□□□□□ -1.13
SCFD1-218ENST00000556256 ADGRE2Q9UHX3 823 aa7.98□□□□□ -1.13
SCFD1-218ENST00000556256 TNFRSF10BO14763 440 aa7.97□□□□□ -1.13
SCFD1-218ENST00000556256 PRMT3O60678 531 aa7.97□□□□□ -1.13
SCFD1-218ENST00000556256 BMP3P12645 472 aa7.97□□□□□ -1.13
SCFD1-218ENST00000556256 RFX1P22670 979 aa7.97□□□□□ -1.13
SCFD1-218ENST00000556256 FZD5Q13467 585 aa7.97□□□□□ -1.13
SCFD1-218ENST00000556256 CFAP70Q5T0N1 1121 aa7.97□□□□□ -1.13
SCFD1-218ENST00000556256 BEND4Q6ZU67 534 aa7.97□□□□□ -1.13
SCFD1-218ENST00000556256 CEP120Q8N960 986 aa7.97□□□□□ -1.13
SCFD1-218ENST00000556256 POP1Q99575 1024 aaKnown RBP7.97□□□□□ -1.13
SCFD1-218ENST00000556256 KCNF1Q9H3M0 494 aa7.97□□□□□ -1.13
SCFD1-218ENST00000556256 SEC31BQ9NQW1 1179 aa7.97□□□□□ -1.13
SCFD1-218ENST00000556256 SART1O43290 800 aaKnown RBP7.96□□□□□ -1.14
SCFD1-218ENST00000556256 KIF4AO95239 1232 aa7.96□□□□□ -1.14
SCFD1-218ENST00000556256 CYP2E1P05181 493 aaPredicted RBP7.96□□□□□ -1.14
SCFD1-218ENST00000556256 OCLNQ16625 522 aa7.96□□□□□ -1.14
SCFD1-218ENST00000556256 CAPN12Q6ZSI9 719 aa7.96□□□□□ -1.14
SCFD1-218ENST00000556256 FAM13BQ9NYF5 915 aa7.96□□□□□ -1.14
SCFD1-218ENST00000556256 NOVA2Q9UNW9 492 aaKnown RBP7.96□□□□□ -1.14
SCFD1-218ENST00000556256 FNDC3AQ9Y2H6 1198 aaKnown RBP7.96□□□□□ -1.14
SCFD1-218ENST00000556256 PRKCSHP14314 528 aaPredicted RBP7.95□□□□□ -1.14
SCFD1-218ENST00000556256 PREPP48147 710 aa7.95□□□□□ -1.14
SCFD1-218ENST00000556256 SWI5Q1ZZU3 235 aa7.95□□□□□ -1.14
SCFD1-218ENST00000556256 LCE1DQ5T752 114 aa7.95□□□□□ -1.14
SCFD1-218ENST00000556256 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.95□□□□□ -1.14
SCFD1-218ENST00000556256 ADAM19Q9H013 955 aa7.95□□□□□ -1.14
SCFD1-218ENST00000556256 WDR64B1ANS9 1081 aa7.94□□□□□ -1.14
SCFD1-218ENST00000556256 PTPRAP18433 802 aa7.94□□□□□ -1.14
SCFD1-218ENST00000556256 HOXA10P31260 410 aaPredicted RBP7.94□□□□□ -1.14
SCFD1-218ENST00000556256 ZAP70P43403 619 aa7.94□□□□□ -1.14
SCFD1-218ENST00000556256 ANKRD34AQ69YU3 496 aa7.94□□□□□ -1.14
SCFD1-218ENST00000556256 NCAPG2Q86XI2 1143 aa7.94□□□□□ -1.14
SCFD1-218ENST00000556256 GPR152Q8TDT2 470 aa7.94□□□□□ -1.14
SCFD1-218ENST00000556256 COL26A1Q96A83 441 aa7.94□□□□□ -1.14
SCFD1-218ENST00000556256 ABI2Q9NYB9 513 aaPredicted RBP7.94□□□□□ -1.14
SCFD1-218ENST00000556256 ACIN1Q9UKV3 1341 aaKnown RBP7.94□□□□□ -1.14
SCFD1-218ENST00000556256 FAM69CQ0P6D2 419 aa7.93□□□□□ -1.14
SCFD1-218ENST00000556256 NAA30Q147X3 362 aaPredicted RBP7.93□□□□□ -1.14
SCFD1-218ENST00000556256 KRTAP4-7Q9BYR0 210 aa7.93□□□□□ -1.14
SCFD1-218ENST00000556256 ZBTB39O15060 712 aa7.92□□□□□ -1.14
SCFD1-218ENST00000556256 ABI1Q8IZP0 508 aa7.92□□□□□ -1.14
SCFD1-218ENST00000556256 WNT8BQ93098 351 aa7.92□□□□□ -1.14
SCFD1-218ENST00000556256 MFSD14AQ96MC6 490 aa7.92□□□□□ -1.14
SCFD1-218ENST00000556256 RNF208Q9H0X6 261 aa7.92□□□□□ -1.14
SCFD1-218ENST00000556256 FAM177BA6PVY3 158 aa7.91□□□□□ -1.14
SCFD1-218ENST00000556256 H3BRJ5 948 aa7.91□□□□□ -1.14
SCFD1-218ENST00000556256 PIP4K2BP78356 416 aa7.91□□□□□ -1.14
SCFD1-218ENST00000556256 MKNK1Q9BUB5 465 aa7.91□□□□□ -1.14
SCFD1-218ENST00000556256 ZMYND15Q9H091 742 aa7.91□□□□□ -1.14
SCFD1-218ENST00000556256 PIM2Q9P1W9 311 aa7.91□□□□□ -1.14
SCFD1-218ENST00000556256 HIF3AQ9Y2N7 669 aa7.91□□□□□ -1.14
SCFD1-218ENST00000556256 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.91□□□□□ -1.14
SCFD1-218ENST00000556256 NLRP12P59046 1061 aa7.9□□□□□ -1.14
SCFD1-218ENST00000556256 RUSC1Q9BVN2 902 aa7.9□□□□□ -1.14
SCFD1-218ENST00000556256 ELP3Q9H9T3 547 aa7.9□□□□□ -1.14
SCFD1-218ENST00000556256 OSGEPQ9NPF4 335 aa7.9□□□□□ -1.14
SCFD1-218ENST00000556256 CABP4P57796 275 aa7.89□□□□□ -1.15
SCFD1-218ENST00000556256 FDX2Q6P4F2 183 aa7.89□□□□□ -1.15
SCFD1-218ENST00000556256 TMEM63CQ9P1W3 806 aa7.89□□□□□ -1.15
SCFD1-218ENST00000556256 CNTN3Q9P232 1028 aa7.89□□□□□ -1.15
SCFD1-218ENST00000556256 STIM2Q9P246 746 aa7.89□□□□□ -1.15
SCFD1-218ENST00000556256 ZMIZ1Q9ULJ6 1067 aa7.89□□□□□ -1.15
SCFD1-218ENST00000556256 MEGF11A6BM72 1044 aa7.88□□□□□ -1.15
SCFD1-218ENST00000556256 NFKBIEO00221 500 aa7.88□□□□□ -1.15
SCFD1-218ENST00000556256 MAP4P27816 1152 aaKnown RBP7.88□□□□□ -1.15
SCFD1-218ENST00000556256 PDE12Q6L8Q7 609 aaKnown RBP7.88□□□□□ -1.15
SCFD1-218ENST00000556256 SLC7A3Q8WY07 619 aa7.88□□□□□ -1.15
SCFD1-218ENST00000556256 ATG3Q9NT62 314 aa7.88□□□□□ -1.15
SCFD1-218ENST00000556256 CXXC1Q9P0U4 656 aaPredicted RBP7.88□□□□□ -1.15
SCFD1-218ENST00000556256 KANSL3Q9P2N6 904 aa7.88□□□□□ -1.15
SCFD1-218ENST00000556256 LEMD3Q9Y2U8 911 aa7.88□□□□□ -1.15
SCFD1-218ENST00000556256 ACPPP15309 386 aa7.87□□□□□ -1.15
SCFD1-218ENST00000556256 SGO2Q562F6 1265 aa7.87□□□□□ -1.15
SCFD1-218ENST00000556256 HGSNATQ68CP4 663 aa7.87□□□□□ -1.15
SCFD1-218ENST00000556256 FBXL6Q8N531 539 aa7.87□□□□□ -1.15
SCFD1-218ENST00000556256 SALL4Q9UJQ4 1053 aa7.87□□□□□ -1.15
SCFD1-218ENST00000556256 GAS2O43903 313 aaKnown RBP7.86□□□□□ -1.15
SCFD1-218ENST00000556256 F13BP05160 661 aa7.86□□□□□ -1.15
SCFD1-218ENST00000556256 ELOAQ14241 798 aaKnown RBP7.86□□□□□ -1.15
SCFD1-218ENST00000556256 MSMPQ1L6U9 139 aa7.86□□□□□ -1.15
SCFD1-218ENST00000556256 GIMAP7Q8NHV1 300 aa7.86□□□□□ -1.15
SCFD1-218ENST00000556256 STK32AQ8WU08 396 aa7.86□□□□□ -1.15
SCFD1-218ENST00000556256 DZANK1Q9NVP4 752 aa7.86□□□□□ -1.15
SCFD1-218ENST00000556256 ANGEL1Q9UNK9 670 aaKnown RBP7.86□□□□□ -1.15
SCFD1-218ENST00000556256 TRPA1O75762 1119 aa7.85□□□□□ -1.15
SCFD1-218ENST00000556256 FOSL1P15407 271 aa7.85□□□□□ -1.15
SCFD1-218ENST00000556256 SHISA5Q8N114 240 aa7.85□□□□□ -1.15
SCFD1-218ENST00000556256 C12orf50Q8NA57 414 aaPredicted RBP7.85□□□□□ -1.15
SCFD1-218ENST00000556256 NUDT16Q96DE0 195 aaKnown RBP7.85□□□□□ -1.15
SCFD1-218ENST00000556256 HHIPQ96QV1 700 aa7.85□□□□□ -1.15
SCFD1-218ENST00000556256 CCDC39Q9UFE4 941 aa7.85□□□□□ -1.15
SCFD1-218ENST00000556256 ZNF777Q9ULD5 760 aaPredicted RBP7.85□□□□□ -1.15
SCFD1-218ENST00000556256 PDE2AO00408 941 aaPredicted RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms