RNA–Protein interactions for RNA: ENST00000555943.1

SUPT16H-204, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2 BASIC

Gene SUPT16H, Length 915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-204ENST00000555943 RETREG2Q8NC44 543 aa9.98□□□□□ -0.81
SUPT16H-204ENST00000555943 SPG7Q9UQ90 795 aa9.98□□□□□ -0.81
SUPT16H-204ENST00000555943 CASZ1Q86V15 1759 aa9.97□□□□□ -0.81
SUPT16H-204ENST00000555943 GAS2L2Q8NHY3 880 aa9.97□□□□□ -0.81
SUPT16H-204ENST00000555943 PLEKHF1Q96S99 279 aa9.97□□□□□ -0.81
SUPT16H-204ENST00000555943 KDRP35968 1356 aa9.97□□□□□ -0.81
SUPT16H-204ENST00000555943 KAT6BQ8WYB5 2073 aa9.96□□□□□ -0.81
SUPT16H-204ENST00000555943 APAF1O14727 1248 aa9.96□□□□□ -0.82
SUPT16H-204ENST00000555943 GDF9O60383 454 aa9.96□□□□□ -0.82
SUPT16H-204ENST00000555943 ATG7O95352 703 aa9.96□□□□□ -0.82
SUPT16H-204ENST00000555943 TXNRD1Q16881 649 aa9.96□□□□□ -0.82
SUPT16H-204ENST00000555943 C1orf141Q5JVX7 400 aa9.96□□□□□ -0.82
SUPT16H-204ENST00000555943 ZCRB1Q8TBF4 217 aaKnown RBP9.96□□□□□ -0.82
SUPT16H-204ENST00000555943 PHACTR3Q96KR7 559 aa9.96□□□□□ -0.82
SUPT16H-204ENST00000555943 YTHDC1Q96MU7 727 aaKnown RBP9.96□□□□□ -0.82
SUPT16H-204ENST00000555943 STK32BQ9NY57 414 aa9.96□□□□□ -0.82
SUPT16H-204ENST00000555943 BTAF1O14981 1849 aa9.96□□□□□ -0.82
SUPT16H-204ENST00000555943 ATP5J2-PTCD1G3V325 749 aa9.95□□□□□ -0.82
SUPT16H-204ENST00000555943 ALDH1A1P00352 501 aa9.95□□□□□ -0.82
SUPT16H-204ENST00000555943 NR3C2P08235 984 aa9.95□□□□□ -0.82
SUPT16H-204ENST00000555943 RIPK4P57078 832 aa9.95□□□□□ -0.82
SUPT16H-204ENST00000555943 HNRNPUQ00839 825 aaKnown RBP eCLIP9.95□□□□□ -0.82
SUPT16H-204ENST00000555943 LMOD3Q0VAK6 560 aa9.95□□□□□ -0.82
SUPT16H-204ENST00000555943 NR5A1Q13285 461 aa9.95□□□□□ -0.82
SUPT16H-204ENST00000555943 NFE2L2Q16236 605 aa9.95□□□□□ -0.82
SUPT16H-204ENST00000555943 MTHFSDQ2M296 383 aaKnown RBP9.95□□□□□ -0.82
SUPT16H-204ENST00000555943 ZNF530Q6P9A1 599 aaPredicted RBP9.95□□□□□ -0.82
SUPT16H-204ENST00000555943 RTF1Q92541 710 aaKnown RBP9.95□□□□□ -0.82
SUPT16H-204ENST00000555943 NOD1Q9Y239 953 aa9.95□□□□□ -0.82
SUPT16H-204ENST00000555943 RRP7AQ9Y3A4 280 aaKnown RBP9.95□□□□□ -0.82
SUPT16H-204ENST00000555943 NCAPD2Q15021 1401 aa9.94□□□□□ -0.82
SUPT16H-204ENST00000555943 PLEKHG2Q9H7P9 1386 aa9.94□□□□□ -0.82
SUPT16H-204ENST00000555943 SENP3-EIF4A1A0A087X0R7 540 aa9.94□□□□□ -0.82
SUPT16H-204ENST00000555943 TNFRSF10AO00220 468 aa9.94□□□□□ -0.82
SUPT16H-204ENST00000555943 HMGB2P26583 209 aaKnown RBP9.94□□□□□ -0.82
SUPT16H-204ENST00000555943 TMPOP42166 694 aaKnown RBP9.94□□□□□ -0.82
SUPT16H-204ENST00000555943 SLC15A2Q16348 729 aa9.94□□□□□ -0.82
SUPT16H-204ENST00000555943 CRTC2Q53ET0 693 aaPredicted RBP9.94□□□□□ -0.82
SUPT16H-204ENST00000555943 PTF1AQ7RTS3 328 aa9.94□□□□□ -0.82
SUPT16H-204ENST00000555943 CCDC116Q8IYX3 515 aa9.94□□□□□ -0.82
SUPT16H-204ENST00000555943 NGEFQ8N5V2 710 aa9.94□□□□□ -0.82
SUPT16H-204ENST00000555943 SNIP1Q8TAD8 396 aaKnown RBP9.94□□□□□ -0.82
SUPT16H-204ENST00000555943 DDX54Q8TDD1 881 aaKnown RBP9.94□□□□□ -0.82
SUPT16H-204ENST00000555943 TMPRSS4Q9NRS4 437 aa9.94□□□□□ -0.82
SUPT16H-204ENST00000555943 MEGF6O75095 1541 aa9.93□□□□□ -0.82
SUPT16H-204ENST00000555943 PCDH11XQ9BZA7 1347 aa9.93□□□□□ -0.82
SUPT16H-204ENST00000555943 PCDH11YQ9BZA8 1340 aa9.93□□□□□ -0.82
SUPT16H-204ENST00000555943 GNAT3A8MTJ3 354 aa9.93□□□□□ -0.82
SUPT16H-204ENST00000555943 RASA1P20936 1047 aa9.93□□□□□ -0.82
SUPT16H-204ENST00000555943 SCTRP47872 440 aa9.93□□□□□ -0.82
SUPT16H-204ENST00000555943 DHX9Q08211 1270 aaKnown RBP9.93□□□□□ -0.82
SUPT16H-204ENST00000555943 USP4Q13107 963 aa9.93□□□□□ -0.82
SUPT16H-204ENST00000555943 SLC27A3Q5K4L6 730 aa9.93□□□□□ -0.82
SUPT16H-204ENST00000555943 TRIM67Q6ZTA4 783 aa9.93□□□□□ -0.82
SUPT16H-204ENST00000555943 IFNL2Q8IZJ0 200 aa9.93□□□□□ -0.82
SUPT16H-204ENST00000555943 FAM196BA6NMK8 535 aa9.92□□□□□ -0.82
SUPT16H-204ENST00000555943 USP17L15C9J2P7 530 aa9.92□□□□□ -0.82
SUPT16H-204ENST00000555943 USP17L10C9JJH3 530 aa9.92□□□□□ -0.82
SUPT16H-204ENST00000555943 USP17L13C9JLJ4 530 aa9.92□□□□□ -0.82
SUPT16H-204ENST00000555943 USP17L12C9JPN9 530 aa9.92□□□□□ -0.82
SUPT16H-204ENST00000555943 USP17L11C9JVI0 530 aa9.92□□□□□ -0.82
SUPT16H-204ENST00000555943 USP17L21D6R901 530 aa9.92□□□□□ -0.82
SUPT16H-204ENST00000555943 USP17L18D6R9N7 530 aa9.92□□□□□ -0.82
SUPT16H-204ENST00000555943 USP17L22D6RA61 530 aa9.92□□□□□ -0.82
SUPT16H-204ENST00000555943 USP17L17D6RBQ6 530 aa9.92□□□□□ -0.82
SUPT16H-204ENST00000555943 USP17L19D6RCP7 530 aa9.92□□□□□ -0.82
SUPT16H-204ENST00000555943 USP17L20D6RJB6 530 aa9.92□□□□□ -0.82
SUPT16H-204ENST00000555943 HSP90AB1P08238 724 aaKnown RBP9.92□□□□□ -0.82
SUPT16H-204ENST00000555943 CLDN10P78369 228 aa9.92□□□□□ -0.82
SUPT16H-204ENST00000555943 USP17L24Q0WX57 530 aa9.92□□□□□ -0.82
SUPT16H-204ENST00000555943 AKAP4Q5JQC9 854 aa9.92□□□□□ -0.82
SUPT16H-204ENST00000555943 PPP1R26Q5T8A7 1209 aaPredicted RBP9.92□□□□□ -0.82
SUPT16H-204ENST00000555943 TRIM50Q86XT4 487 aa9.92□□□□□ -0.82
SUPT16H-204ENST00000555943 OGFOD1Q8N543 542 aa9.92□□□□□ -0.82
SUPT16H-204ENST00000555943 MTFR1LQ9H019 292 aa9.92□□□□□ -0.82
SUPT16H-204ENST00000555943 RGPD2P0DJD1 1756 aa9.92□□□□□ -0.82
SUPT16H-204ENST00000555943 QSER1Q2KHR3 1735 aa9.92□□□□□ -0.82
SUPT16H-204ENST00000555943 PAPPAQ13219 1627 aa9.92□□□□□ -0.82
SUPT16H-204ENST00000555943 J3QL48 77 aa9.91□□□□□ -0.82
SUPT16H-204ENST00000555943 HTATSF1O43719 755 aaKnown RBP9.91□□□□□ -0.82
SUPT16H-204ENST00000555943 PHKG2P15735 406 aa9.91□□□□□ -0.82
SUPT16H-204ENST00000555943 ERVK-9P63128 1117 aa9.91□□□□□ -0.82
SUPT16H-204ENST00000555943 GTF2IP78347 998 aa9.91□□□□□ -0.82
SUPT16H-204ENST00000555943 PTK7Q13308 1070 aa9.91□□□□□ -0.82
SUPT16H-204ENST00000555943 NNTQ13423 1086 aa9.91□□□□□ -0.82
SUPT16H-204ENST00000555943 ELOAQ14241 798 aaKnown RBP9.91□□□□□ -0.82
SUPT16H-204ENST00000555943 CYP4X1Q8N118 509 aa9.91□□□□□ -0.82
SUPT16H-204ENST00000555943 ZNF784Q8NCA9 323 aaPredicted RBP9.91□□□□□ -0.82
SUPT16H-204ENST00000555943 ACSBG1Q96GR2 724 aa9.91□□□□□ -0.82
SUPT16H-204ENST00000555943 CYLDQ9NQC7 956 aa9.91□□□□□ -0.82
SUPT16H-204ENST00000555943 TOR4AQ9NXH8 423 aa9.91□□□□□ -0.82
SUPT16H-204ENST00000555943 ZMIZ1Q9ULJ6 1067 aa9.91□□□□□ -0.82
SUPT16H-204ENST00000555943 WASF2Q9Y6W5 498 aa9.91□□□□□ -0.82
SUPT16H-204ENST00000555943 SHANK3Q9BYB0 1731 aa9.9□□□□□ -0.82
SUPT16H-204ENST00000555943 MAP3K5Q99683 1374 aa9.9□□□□□ -0.82
SUPT16H-204ENST00000555943 TTC24A2A3L6 582 aaPredicted RBP9.9□□□□□ -0.82
SUPT16H-204ENST00000555943 MYCP01106 439 aaPredicted RBP9.9□□□□□ -0.82
SUPT16H-204ENST00000555943 CALD1Q05682 793 aaKnown RBP9.9□□□□□ -0.82
SUPT16H-204ENST00000555943 DNAAF2Q9NVR5 837 aaKnown RBP9.9□□□□□ -0.82
SUPT16H-204ENST00000555943 NOVA2Q9UNW9 492 aaKnown RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms