RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 SPC24Q8NBT2 197 aa18.98■□□□□ 0.63
TUBB3-209ENST00000555609 JARID2Q92833 1246 aaPredicted RBP18.98■□□□□ 0.63
TUBB3-209ENST00000555609 NEUROD6Q96NK8 337 aa18.98■□□□□ 0.63
TUBB3-209ENST00000555609 TRIM5Q9C035 493 aa18.98■□□□□ 0.63
TUBB3-209ENST00000555609 PTPDC1A2A3K4 754 aa18.97■□□□□ 0.63
TUBB3-209ENST00000555609 E7EWF7 191 aa18.97■□□□□ 0.63
TUBB3-209ENST00000555609 DTNBO60941 627 aa18.97■□□□□ 0.63
TUBB3-209ENST00000555609 IFIT1P09914 478 aaKnown RBP18.97■□□□□ 0.63
TUBB3-209ENST00000555609 HSPD1P10809 573 aaKnown RBP18.97■□□□□ 0.63
TUBB3-209ENST00000555609 STX1AQ16623 288 aa18.97■□□□□ 0.63
TUBB3-209ENST00000555609 CCDC73Q6ZRK6 1079 aa18.97■□□□□ 0.63
TUBB3-209ENST00000555609 PCDH11XQ9BZA7 1347 aa18.97■□□□□ 0.63
TUBB3-209ENST00000555609 PCDH11YQ9BZA8 1340 aa18.97■□□□□ 0.63
TUBB3-209ENST00000555609 NBPF26B4DH59 902 aa18.97■□□□□ 0.63
TUBB3-209ENST00000555609 NBPF14Q5TI25 921 aa18.97■□□□□ 0.63
TUBB3-209ENST00000555609 NBPF10Q6P3W6 841 aaKnown RBP18.97■□□□□ 0.63
TUBB3-209ENST00000555609 NBPF15Q8N660 670 aa18.97■□□□□ 0.63
TUBB3-209ENST00000555609 DDX11Q96FC9 970 aa18.97■□□□□ 0.63
TUBB3-209ENST00000555609 AKAP2Q9Y2D5 859 aa18.97■□□□□ 0.63
TUBB3-209ENST00000555609 GOLGA6L19H0YKK7 550 aa18.96■□□□□ 0.63
TUBB3-209ENST00000555609 CTDNEP1O95476 244 aa18.96■□□□□ 0.63
TUBB3-209ENST00000555609 NKX1-1Q15270 411 aaPredicted RBP18.96■□□□□ 0.63
TUBB3-209ENST00000555609 NUP188Q5SRE5 1749 aa18.96■□□□□ 0.63
TUBB3-209ENST00000555609 CCAR1Q8IX12 1150 aaKnown RBP18.96■□□□□ 0.63
TUBB3-209ENST00000555609 DRC7Q8IY82 874 aa18.96■□□□□ 0.63
TUBB3-209ENST00000555609 VSIG10Q8N0Z9 540 aa18.96■□□□□ 0.63
TUBB3-209ENST00000555609 DDX17Q92841 729 aaKnown RBP18.96■□□□□ 0.63
TUBB3-209ENST00000555609 MRFAP1L1Q96HT8 127 aa18.96■□□□□ 0.63
TUBB3-209ENST00000555609 PTGS1P23219 599 aa18.95■□□□□ 0.62
TUBB3-209ENST00000555609 CCDC186Q7Z3E2 898 aa18.95■□□□□ 0.62
TUBB3-209ENST00000555609 ANO10Q9NW15 660 aa18.95■□□□□ 0.62
TUBB3-209ENST00000555609 SPATA31A3Q5VYP0 1347 aa18.95■□□□□ 0.62
TUBB3-209ENST00000555609 DHX16O60231 1041 aaKnown RBP18.94■□□□□ 0.62
TUBB3-209ENST00000555609 PDIA3P30101 505 aaKnown RBP18.94■□□□□ 0.62
TUBB3-209ENST00000555609 FAM160A1Q05DH4 1040 aa18.94■□□□□ 0.62
TUBB3-209ENST00000555609 APOBRQ0VD83 1088 aa18.94■□□□□ 0.62
TUBB3-209ENST00000555609 IQCB1Q15051 598 aa18.94■□□□□ 0.62
TUBB3-209ENST00000555609 SYCP1Q15431 976 aa18.94■□□□□ 0.62
TUBB3-209ENST00000555609 C17orf53Q8N3J3 647 aaPredicted RBP18.94■□□□□ 0.62
TUBB3-209ENST00000555609 CCDC94Q9BW85 323 aaPredicted RBP18.94■□□□□ 0.62
TUBB3-209ENST00000555609 DNAJC25Q9H1X3 360 aa18.94■□□□□ 0.62
TUBB3-209ENST00000555609 CEP126Q9P2H0 1117 aa18.94■□□□□ 0.62
TUBB3-209ENST00000555609 NDUFB9Q9Y6M9 179 aa18.94■□□□□ 0.62
TUBB3-209ENST00000555609 MAST3O60307 1309 aa18.94■□□□□ 0.62
TUBB3-209ENST00000555609 WDR19Q8NEZ3 1342 aa18.94■□□□□ 0.62
TUBB3-209ENST00000555609 UBR2Q8IWV8 1755 aa18.94■□□□□ 0.62
TUBB3-209ENST00000555609 MYH15Q9Y2K3 1946 aa18.94■□□□□ 0.62
TUBB3-209ENST00000555609 A0A1W2PQ27 194 aa18.94■□□□□ 0.62
TUBB3-209ENST00000555609 A0A1W2PQ64 194 aa18.94■□□□□ 0.62
TUBB3-209ENST00000555609 A0A1W2PQD8 194 aa18.94■□□□□ 0.62
TUBB3-209ENST00000555609 KINO60870 393 aaKnown RBP18.94■□□□□ 0.62
TUBB3-209ENST00000555609 PIP4K2AP48426 406 aaPredicted RBP18.94■□□□□ 0.62
TUBB3-209ENST00000555609 TRIM28Q13263 835 aaKnown RBP18.94■□□□□ 0.62
TUBB3-209ENST00000555609 CCDC158Q5M9N0 1113 aa18.94■□□□□ 0.62
TUBB3-209ENST00000555609 LAMA4Q16363 1823 aa18.94■□□□□ 0.62
TUBB3-209ENST00000555609 A0A1B0GUL7 405 aa18.93■□□□□ 0.62
TUBB3-209ENST00000555609 TIMM10P62072 90 aa18.93■□□□□ 0.62
TUBB3-209ENST00000555609 ZSCAN25Q6NSZ9 544 aa18.93■□□□□ 0.62
TUBB3-209ENST00000555609 BRINP3Q76B58 766 aa18.93■□□□□ 0.62
TUBB3-209ENST00000555609 ENGASEQ8NFI3 743 aa18.93■□□□□ 0.62
TUBB3-209ENST00000555609 ZCRB1Q8TBF4 217 aaKnown RBP18.93■□□□□ 0.62
TUBB3-209ENST00000555609 PKNOX2Q96KN3 472 aa18.93■□□□□ 0.62
TUBB3-209ENST00000555609 RTEL1Q9NZ71 1219 aa18.93■□□□□ 0.62
TUBB3-209ENST00000555609 TJP1Q07157 1748 aa18.93■□□□□ 0.62
TUBB3-209ENST00000555609 ISCA1Q9BUE6 129 aa18.92■□□□□ 0.62
TUBB3-209ENST00000555609 LRRC2Q9BYS8 371 aa18.92■□□□□ 0.62
TUBB3-209ENST00000555609 NAT10Q9H0A0 1025 aaKnown RBP18.92■□□□□ 0.62
TUBB3-209ENST00000555609 CLIP2Q9UDT6 1046 aa18.92■□□□□ 0.62
TUBB3-209ENST00000555609 CTIFO43310 598 aaKnown RBP18.92■□□□□ 0.62
TUBB3-209ENST00000555609 HSPA1LP34931 641 aa18.92■□□□□ 0.62
TUBB3-209ENST00000555609 SNW1Q13573 536 aaKnown RBP18.92■□□□□ 0.62
TUBB3-209ENST00000555609 DHX8Q14562 1220 aaKnown RBP18.92■□□□□ 0.62
TUBB3-209ENST00000555609 TTLL7Q6ZT98 887 aa18.92■□□□□ 0.62
TUBB3-209ENST00000555609 PLA2G12BQ9BX93 195 aa18.92■□□□□ 0.62
TUBB3-209ENST00000555609 PAXBP1Q9Y5B6 917 aa18.92■□□□□ 0.62
TUBB3-209ENST00000555609 PAPPAQ13219 1627 aa18.91■□□□□ 0.62
TUBB3-209ENST00000555609 IMMTQ16891 758 aaKnown RBP18.91■□□□□ 0.62
TUBB3-209ENST00000555609 ADALQ6DHV7 355 aa18.91■□□□□ 0.62
TUBB3-209ENST00000555609 USP28Q96RU2 1077 aa18.91■□□□□ 0.62
TUBB3-209ENST00000555609 CARMIL3Q8ND23 1372 aa18.91■□□□□ 0.62
TUBB3-209ENST00000555609 KCPQ6ZWJ8 1503 aa18.91■□□□□ 0.62
TUBB3-209ENST00000555609 CHGBP05060 677 aa18.9■□□□□ 0.62
TUBB3-209ENST00000555609 WDR17Q8IZU2 1322 aa18.9■□□□□ 0.62
TUBB3-209ENST00000555609 TNS2Q63HR2 1409 aa18.9■□□□□ 0.62
TUBB3-209ENST00000555609 YEATS4O95619 227 aa18.9■□□□□ 0.62
TUBB3-209ENST00000555609 CHRNA2Q15822 529 aa18.9■□□□□ 0.62
TUBB3-209ENST00000555609 CCDC57Q2TAC2 916 aa18.9■□□□□ 0.62
TUBB3-209ENST00000555609 LRRC24Q50LG9 513 aa18.9■□□□□ 0.62
TUBB3-209ENST00000555609 BRAPQ7Z569 592 aa18.9■□□□□ 0.62
TUBB3-209ENST00000555609 KCNG4Q8TDN1 519 aa18.9■□□□□ 0.62
TUBB3-209ENST00000555609 SMTNL1A8MU46 457 aa18.89■□□□□ 0.61
TUBB3-209ENST00000555609 BECN2A8MW95 431 aa18.89■□□□□ 0.61
TUBB3-209ENST00000555609 RBM6P78332 1123 aaKnown RBP18.89■□□□□ 0.61
TUBB3-209ENST00000555609 CCT2P78371 535 aaKnown RBP18.89■□□□□ 0.61
TUBB3-209ENST00000555609 TTC39AQ5SRH9 613 aa18.89■□□□□ 0.61
TUBB3-209ENST00000555609 SMAP1Q8IYB5 467 aaPredicted RBP18.89■□□□□ 0.61
TUBB3-209ENST00000555609 CEP57L1Q8IYX8 460 aa18.89■□□□□ 0.61
TUBB3-209ENST00000555609 ZNF710Q8N1W2 664 aa18.89■□□□□ 0.61
TUBB3-209ENST00000555609 MRPS27Q92552 414 aaKnown RBP18.89■□□□□ 0.61
TUBB3-209ENST00000555609 TEX13AQ9BXU3 409 aaPredicted RBP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms