RNA–Protein interactions for RNA: ENST00000555358.5

STRN3-207, Transcript of striatin 3, humanhuman

TSL 1 (best)

Gene STRN3, Length 2,208 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-207ENST00000555358 DNM1Q05193 864 aaKnown RBP28.14■■■□□ 2.1
STRN3-207ENST00000555358 TAF1LQ8IZX4 1826 aa28.14■■■□□ 2.1
STRN3-207ENST00000555358 CIAO1O76071 339 aa28.14■■■□□ 2.09
STRN3-207ENST00000555358 ME3Q16798 604 aa28.14■■■□□ 2.09
STRN3-207ENST00000555358 PDE8AO60658 829 aa28.13■■■□□ 2.09
STRN3-207ENST00000555358 DTNBO60941 627 aa28.13■■■□□ 2.09
STRN3-207ENST00000555358 ITGA6P23229 1130 aa28.13■■■□□ 2.09
STRN3-207ENST00000555358 TPRNQ4KMQ1 711 aa28.13■■■□□ 2.09
STRN3-207ENST00000555358 TIMM10P62072 90 aa28.12■■■□□ 2.09
STRN3-207ENST00000555358 DYNC1I1O14576 645 aa28.12■■■□□ 2.09
STRN3-207ENST00000555358 TAF7LQ5H9L4 462 aa28.12■■■□□ 2.09
STRN3-207ENST00000555358 UTP14AQ9BVJ6 771 aaKnown RBP28.12■■■□□ 2.09
STRN3-207ENST00000555358 AMIGO3Q86WK7 504 aa28.11■■■□□ 2.09
STRN3-207ENST00000555358 NEUROD6Q96NK8 337 aa28.11■■■□□ 2.09
STRN3-207ENST00000555358 RBM8AQ9Y5S9 174 aaKnown RBP28.11■■■□□ 2.09
STRN3-207ENST00000555358 SH3TC1Q8TE82 1336 aa28.11■■■□□ 2.09
STRN3-207ENST00000555358 RC3H1Q5TC82 1133 aaKnown RBP28.11■■■□□ 2.09
STRN3-207ENST00000555358 CREB3L3Q68CJ9 461 aa28.11■■■□□ 2.09
STRN3-207ENST00000555358 SNRKQ9NRH2 765 aa28.11■■■□□ 2.09
STRN3-207ENST00000555358 GNPATO15228 680 aa28.1■■■□□ 2.09
STRN3-207ENST00000555358 PARP10Q53GL7 1025 aa28.1■■■□□ 2.09
STRN3-207ENST00000555358 GIMAP6Q6P9H5 292 aa28.1■■■□□ 2.09
STRN3-207ENST00000555358 MPNDQ8N594 471 aa28.1■■■□□ 2.09
STRN3-207ENST00000555358 PIBF1Q8WXW3 757 aa28.1■■■□□ 2.09
STRN3-207ENST00000555358 MAP4K1Q92918 833 aa28.1■■■□□ 2.09
STRN3-207ENST00000555358 FAM227BQ96M60 508 aa28.1■■■□□ 2.09
STRN3-207ENST00000555358 FAM13BQ9NYF5 915 aa28.1■■■□□ 2.09
STRN3-207ENST00000555358 KDM4AO75164 1064 aa28.1■■■□□ 2.09
STRN3-207ENST00000555358 EDC3Q96F86 508 aaKnown RBP28.1■■■□□ 2.09
STRN3-207ENST00000555358 ZNF830Q96NB3 372 aaPredicted RBP28.1■■■□□ 2.09
STRN3-207ENST00000555358 BCL11BQ9C0K0 894 aaPredicted RBP28.1■■■□□ 2.09
STRN3-207ENST00000555358 NDUFB9Q9Y6M9 179 aa28.1■■■□□ 2.09
STRN3-207ENST00000555358 DDX60Q8IY21 1712 aaKnown RBP28.09■■■□□ 2.09
STRN3-207ENST00000555358 RPS6KA4O75676 772 aa28.09■■■□□ 2.09
STRN3-207ENST00000555358 NTSR2O95665 410 aa28.09■■■□□ 2.09
STRN3-207ENST00000555358 ZKSCAN1P17029 563 aaPredicted RBP28.09■■■□□ 2.09
STRN3-207ENST00000555358 ATP5JP18859 108 aa28.09■■■□□ 2.09
STRN3-207ENST00000555358 TPCN1Q9ULQ1 816 aa28.09■■■□□ 2.09
STRN3-207ENST00000555358 ZNF652Q9Y2D9 606 aa28.09■■■□□ 2.09
STRN3-207ENST00000555358 ZNF609O15014 1411 aa28.09■■■□□ 2.09
STRN3-207ENST00000555358 NMIQ13287 307 aaPredicted RBP28.08■■■□□ 2.09
STRN3-207ENST00000555358 GPR108Q9NPR9 543 aa28.08■■■□□ 2.09
STRN3-207ENST00000555358 NECAB1Q8N987 351 aa28.08■■■□□ 2.09
STRN3-207ENST00000555358 MAP7D2Q96T17 732 aa28.08■■■□□ 2.09
STRN3-207ENST00000555358 CEP126Q9P2H0 1117 aa28.08■■■□□ 2.09
STRN3-207ENST00000555358 ANKRD18BA2A2Z9 1011 aa28.07■■■□□ 2.08
STRN3-207ENST00000555358 COL9A3Q14050 684 aaPredicted RBP28.07■■■□□ 2.08
STRN3-207ENST00000555358 CLEC4GQ6UXB4 293 aa28.07■■■□□ 2.08
STRN3-207ENST00000555358 KRT27Q7Z3Y8 459 aa28.07■■■□□ 2.08
STRN3-207ENST00000555358 BCL2L12Q9HB09 334 aa28.07■■■□□ 2.08
STRN3-207ENST00000555358 A0A1B0GUL7 405 aa28.07■■■□□ 2.08
STRN3-207ENST00000555358 VPS37CA5D8V6 355 aaPredicted RBP28.07■■■□□ 2.08
STRN3-207ENST00000555358 HIP1O00291 1037 aa28.07■■■□□ 2.08
STRN3-207ENST00000555358 SRP68Q9UHB9 627 aaKnown RBP28.07■■■□□ 2.08
STRN3-207ENST00000555358 FBXO3Q9UK99 471 aa28.07■■■□□ 2.08
STRN3-207ENST00000555358 SCN7AQ01118 1682 aa28.06■■■□□ 2.08
STRN3-207ENST00000555358 TTC12Q9H892 705 aaPredicted RBP28.06■■■□□ 2.08
STRN3-207ENST00000555358 SLC27A2O14975 620 aa28.06■■■□□ 2.08
STRN3-207ENST00000555358 LDHAL6AQ6ZMR3 332 aa28.06■■■□□ 2.08
STRN3-207ENST00000555358 LRRC4BQ9NT99 713 aa28.06■■■□□ 2.08
STRN3-207ENST00000555358 BICDL1Q6ZP65 573 aa28.05■■■□□ 2.08
STRN3-207ENST00000555358 RIPOR2Q9Y4F9 1068 aa28.05■■■□□ 2.08
STRN3-207ENST00000555358 RIC1Q4ADV7 1423 aa28.05■■■□□ 2.08
STRN3-207ENST00000555358 NOLC1Q14978 699 aaKnown RBP eCLIP28.04■■■□□ 2.08
STRN3-207ENST00000555358 USPL1Q5W0Q7 1092 aa28.04■■■□□ 2.08
STRN3-207ENST00000555358 C4BP0C0L5 1744 aa28.04■■■□□ 2.08
STRN3-207ENST00000555358 AP5Z1O43299 807 aa28.04■■■□□ 2.08
STRN3-207ENST00000555358 TBC1D9BQ66K14 1250 aa28.03■■■□□ 2.08
STRN3-207ENST00000555358 AK7Q96M32 723 aa28.03■■■□□ 2.08
STRN3-207ENST00000555358 DNAJC2Q99543 621 aaKnown RBP28.03■■■□□ 2.08
STRN3-207ENST00000555358 FSD1Q9BTV5 496 aa28.03■■■□□ 2.08
STRN3-207ENST00000555358 NARFQ9UHQ1 456 aa28.03■■■□□ 2.08
STRN3-207ENST00000555358 RTCBQ9Y3I0 505 aaKnown RBP28.03■■■□□ 2.08
STRN3-207ENST00000555358 MED23Q9ULK4 1368 aa28.03■■■□□ 2.08
STRN3-207ENST00000555358 A0A0D9SFI3 127 aa28.03■■■□□ 2.08
STRN3-207ENST00000555358 FAM196AQ6ZSG2 479 aa28.03■■■□□ 2.08
STRN3-207ENST00000555358 TRIM37O94972 964 aa28.02■■■□□ 2.08
STRN3-207ENST00000555358 PSMA5P28066 241 aa28.02■■■□□ 2.08
STRN3-207ENST00000555358 KCNJ4P48050 445 aa28.02■■■□□ 2.08
STRN3-207ENST00000555358 TTC6Q86TZ1 520 aa28.02■■■□□ 2.08
STRN3-207ENST00000555358 CNNM1Q9NRU3 951 aa28.02■■■□□ 2.08
STRN3-207ENST00000555358 LAMB2P55268 1798 aa28.02■■■□□ 2.08
STRN3-207ENST00000555358 LARP1BQ659C4 914 aaKnown RBP28.02■■■□□ 2.08
STRN3-207ENST00000555358 CDC37L1Q7L3B6 337 aa28.02■■■□□ 2.08
STRN3-207ENST00000555358 SEC31BQ9NQW1 1179 aa28.02■■■□□ 2.08
STRN3-207ENST00000555358 SPTLC3Q9NUV7 552 aa28.02■■■□□ 2.08
STRN3-207ENST00000555358 PDIA4P13667 645 aaKnown RBP28.01■■■□□ 2.07
STRN3-207ENST00000555358 ADORA1P30542 326 aa28.01■■■□□ 2.07
STRN3-207ENST00000555358 METTL24Q5JXM2 366 aa28.01■■■□□ 2.07
STRN3-207ENST00000555358 MYRIPQ8NFW9 859 aa28.01■■■□□ 2.07
STRN3-207ENST00000555358 ARHGEF1Q92888 912 aaKnown RBP28.01■■■□□ 2.07
STRN3-207ENST00000555358 HAUS7Q99871 368 aa28.01■■■□□ 2.07
STRN3-207ENST00000555358 ALDH8A1Q9H2A2 487 aaPredicted RBP28■■■□□ 2.07
STRN3-207ENST00000555358 ELP1O95163 1332 aa28■■■□□ 2.07
STRN3-207ENST00000555358 TAF6LQ9Y6J9 622 aa28■■■□□ 2.07
STRN3-207ENST00000555358 KRT85P78386 507 aa27.99■■■□□ 2.07
STRN3-207ENST00000555358 ERFEQ4G0M1 354 aa27.99■■■□□ 2.07
STRN3-207ENST00000555358 C17orf53Q8N3J3 647 aaPredicted RBP27.99■■■□□ 2.07
STRN3-207ENST00000555358 C4AP0C0L4 1744 aa27.99■■■□□ 2.07
STRN3-207ENST00000555358 ZMYND15Q9H091 742 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms