RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 PRC1O43663 620 aa14.33□□□□□ -0.12
ARHGEF40-206ENST00000555232 CTDSPL2Q05D32 466 aa14.33□□□□□ -0.12
ARHGEF40-206ENST00000555232 ZSCAN25Q6NSZ9 544 aa14.33□□□□□ -0.12
ARHGEF40-206ENST00000555232 RUFY3Q7L099 469 aa14.33□□□□□ -0.12
ARHGEF40-206ENST00000555232 FILIP1Q7Z7B0 1213 aa14.33□□□□□ -0.12
ARHGEF40-206ENST00000555232 DIP2AQ14689 1571 aa14.32□□□□□ -0.12
ARHGEF40-206ENST00000555232 SPATA31D1Q6ZQQ2 1576 aa14.32□□□□□ -0.12
ARHGEF40-206ENST00000555232 KDM4FA0A1W2PPD8 638 aa14.32□□□□□ -0.12
ARHGEF40-206ENST00000555232 ZSCAN22P10073 491 aaPredicted RBP14.32□□□□□ -0.12
ARHGEF40-206ENST00000555232 MKNK2Q9HBH9 465 aa14.32□□□□□ -0.12
ARHGEF40-206ENST00000555232 MAPK8IP2Q13387 824 aaPredicted RBP14.32□□□□□ -0.12
ARHGEF40-206ENST00000555232 PICALMQ13492 652 aa14.32□□□□□ -0.12
ARHGEF40-206ENST00000555232 KBTBD3Q8NAB2 608 aa14.32□□□□□ -0.12
ARHGEF40-206ENST00000555232 UIMC1Q96RL1 719 aa14.32□□□□□ -0.12
ARHGEF40-206ENST00000555232 MPHOSPH10O00566 681 aaKnown RBP14.31□□□□□ -0.12
ARHGEF40-206ENST00000555232 HSPA4P34932 840 aa14.31□□□□□ -0.12
ARHGEF40-206ENST00000555232 SLC12A7Q9Y666 1083 aa14.31□□□□□ -0.12
ARHGEF40-206ENST00000555232 TAF6LQ9Y6J9 622 aa14.31□□□□□ -0.12
ARHGEF40-206ENST00000555232 GOLGA8AA7E2F4 631 aa14.31□□□□□ -0.12
ARHGEF40-206ENST00000555232 GAS2L3Q86XJ1 694 aa14.31□□□□□ -0.12
ARHGEF40-206ENST00000555232 HOMER1Q86YM7 354 aa14.31□□□□□ -0.12
ARHGEF40-206ENST00000555232 SDR42E1Q8WUS8 393 aa14.31□□□□□ -0.12
ARHGEF40-206ENST00000555232 UQCRHLA0A096LP55 91 aa14.31□□□□□ -0.12
ARHGEF40-206ENST00000555232 TRIM37O94972 964 aa14.31□□□□□ -0.12
ARHGEF40-206ENST00000555232 UQCRHP07919 91 aa14.31□□□□□ -0.12
ARHGEF40-206ENST00000555232 TPD52L1Q16890 204 aaPredicted RBP14.31□□□□□ -0.12
ARHGEF40-206ENST00000555232 PHKBQ93100 1093 aa14.31□□□□□ -0.12
ARHGEF40-206ENST00000555232 NUP62CLQ9H1M0 184 aa14.31□□□□□ -0.12
ARHGEF40-206ENST00000555232 TPCN1Q9ULQ1 816 aa14.31□□□□□ -0.12
ARHGEF40-206ENST00000555232 CDK11BP21127 795 aaKnown RBP14.3□□□□□ -0.12
ARHGEF40-206ENST00000555232 ANKARQ7Z5J8 1434 aa14.3□□□□□ -0.12
ARHGEF40-206ENST00000555232 A0A087WWV3 80 aa14.3□□□□□ -0.12
ARHGEF40-206ENST00000555232 HEG1Q9ULI3 1381 aa14.3□□□□□ -0.12
ARHGEF40-206ENST00000555232 MYOM1P52179 1685 aa14.3□□□□□ -0.12
ARHGEF40-206ENST00000555232 RIMS1Q86UR5 1692 aaKnown RBP14.3□□□□□ -0.12
ARHGEF40-206ENST00000555232 MFSD6Q6ZSS7 791 aa14.3□□□□□ -0.12
ARHGEF40-206ENST00000555232 CDC37L1Q7L3B6 337 aa14.3□□□□□ -0.12
ARHGEF40-206ENST00000555232 TRIM22Q8IYM9 498 aa14.3□□□□□ -0.12
ARHGEF40-206ENST00000555232 SH2B1Q9NRF2 756 aaPredicted RBP14.3□□□□□ -0.12
ARHGEF40-206ENST00000555232 ZNF532Q9HCE3 1301 aa14.29□□□□□ -0.12
ARHGEF40-206ENST00000555232 PDE8AO60658 829 aa14.29□□□□□ -0.12
ARHGEF40-206ENST00000555232 KIF2CQ99661 725 aa14.29□□□□□ -0.12
ARHGEF40-206ENST00000555232 GJB4Q9NTQ9 266 aa14.29□□□□□ -0.12
ARHGEF40-206ENST00000555232 CTSWP56202 376 aa14.29□□□□□ -0.12
ARHGEF40-206ENST00000555232 PDIA6Q15084 440 aa14.29□□□□□ -0.12
ARHGEF40-206ENST00000555232 TPTE2Q6XPS3 522 aa14.29□□□□□ -0.12
ARHGEF40-206ENST00000555232 GIGYF2Q6Y7W6 1299 aaKnown RBP14.29□□□□□ -0.12
ARHGEF40-206ENST00000555232 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.29□□□□□ -0.12
ARHGEF40-206ENST00000555232 NCOA7Q8NI08 942 aa14.29□□□□□ -0.12
ARHGEF40-206ENST00000555232 COL3A1P02461 1466 aaPredicted RBP14.29□□□□□ -0.12
ARHGEF40-206ENST00000555232 METAP2P50579 478 aaKnown RBP eCLIP14.29□□□□□ -0.12
ARHGEF40-206ENST00000555232 SUSD4Q5VX71 490 aa14.29□□□□□ -0.12
ARHGEF40-206ENST00000555232 LSG1Q9H089 658 aaKnown RBP14.29□□□□□ -0.12
ARHGEF40-206ENST00000555232 DACT1Q9NYF0 836 aa14.29□□□□□ -0.12
ARHGEF40-206ENST00000555232 SAP30BPQ9UHR5 308 aaKnown RBP14.29□□□□□ -0.12
ARHGEF40-206ENST00000555232 SMC2O95347 1197 aa14.28□□□□□ -0.12
ARHGEF40-206ENST00000555232 SCARF1Q14162 830 aa14.28□□□□□ -0.12
ARHGEF40-206ENST00000555232 NAA16Q6N069 864 aaPredicted RBP14.28□□□□□ -0.12
ARHGEF40-206ENST00000555232 NLRP10Q86W26 655 aa14.28□□□□□ -0.12
ARHGEF40-206ENST00000555232 PTPDC1A2A3K4 754 aa14.28□□□□□ -0.12
ARHGEF40-206ENST00000555232 TSPY2A6NKD2 308 aa14.28□□□□□ -0.12
ARHGEF40-206ENST00000555232 F13A1P00488 732 aa14.28□□□□□ -0.12
ARHGEF40-206ENST00000555232 AATFQ9NY61 560 aaKnown RBP eCLIP14.28□□□□□ -0.12
ARHGEF40-206ENST00000555232 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.28□□□□□ -0.121e-6■■■□□ 15.8
ARHGEF40-206ENST00000555232 A0A0G2JLW4 131 aa14.28□□□□□ -0.12
ARHGEF40-206ENST00000555232 GOLGA6L6A8MZA4 724 aa14.28□□□□□ -0.12
ARHGEF40-206ENST00000555232 CYP21A2P08686 494 aa14.28□□□□□ -0.12
ARHGEF40-206ENST00000555232 MCM5P33992 734 aa14.28□□□□□ -0.12
ARHGEF40-206ENST00000555232 EIF6P56537 245 aaKnown RBP14.28□□□□□ -0.12
ARHGEF40-206ENST00000555232 ANAPC15P60006 121 aa14.28□□□□□ -0.12
ARHGEF40-206ENST00000555232 POLA2Q14181 598 aa14.28□□□□□ -0.12
ARHGEF40-206ENST00000555232 CCDC102BQ68D86 513 aa14.28□□□□□ -0.12
ARHGEF40-206ENST00000555232 ZBTB38Q8NAP3 1195 aaPredicted RBP14.28□□□□□ -0.12
ARHGEF40-206ENST00000555232 MED14O60244 1454 aa14.28□□□□□ -0.12
ARHGEF40-206ENST00000555232 SPECC1Q5M775 1068 aa14.27□□□□□ -0.12
ARHGEF40-206ENST00000555232 KLHL10Q6JEL2 608 aa14.27□□□□□ -0.12
ARHGEF40-206ENST00000555232 ZSCAN30Q86W11 494 aa14.27□□□□□ -0.12
ARHGEF40-206ENST00000555232 COPRSQ9NQ92 184 aa14.27□□□□□ -0.12
ARHGEF40-206ENST00000555232 MAP3K15Q6ZN16 1313 aa14.27□□□□□ -0.12
ARHGEF40-206ENST00000555232 ATP5JP18859 108 aa14.27□□□□□ -0.13
ARHGEF40-206ENST00000555232 KLHL40Q2TBA0 621 aa14.27□□□□□ -0.13
ARHGEF40-206ENST00000555232 TRAPPC3LQ5T215 181 aa14.27□□□□□ -0.13
ARHGEF40-206ENST00000555232 KAZALD1Q96I82 304 aa14.27□□□□□ -0.13
ARHGEF40-206ENST00000555232 FTOQ9C0B1 505 aaKnown RBP eCLIP14.27□□□□□ -0.13
ARHGEF40-206ENST00000555232 DLC1Q96QB1 1528 aa14.27□□□□□ -0.13
ARHGEF40-206ENST00000555232 PRKAB2O43741 272 aa14.27□□□□□ -0.13
ARHGEF40-206ENST00000555232 TECPR2O15040 1411 aa14.27□□□□□ -0.13
ARHGEF40-206ENST00000555232 FAM196AQ6ZSG2 479 aa14.26□□□□□ -0.13
ARHGEF40-206ENST00000555232 FSIP1Q8NA03 581 aa14.26□□□□□ -0.13
ARHGEF40-206ENST00000555232 PXDNQ92626 1479 aa14.26□□□□□ -0.13
ARHGEF40-206ENST00000555232 RPS6KB1P23443 525 aa14.26□□□□□ -0.13
ARHGEF40-206ENST00000555232 IARSP41252 1262 aaKnown RBP14.26□□□□□ -0.13
ARHGEF40-206ENST00000555232 DHX32Q7L7V1 743 aaKnown RBP14.26□□□□□ -0.13
ARHGEF40-206ENST00000555232 CCAR2Q8N163 923 aaKnown RBP14.26□□□□□ -0.13
ARHGEF40-206ENST00000555232 OSBP2Q969R2 916 aa14.26□□□□□ -0.13
ARHGEF40-206ENST00000555232 PUS7LQ9H0K6 701 aaKnown RBP14.26□□□□□ -0.13
ARHGEF40-206ENST00000555232 MCM9Q9NXL9 1143 aa14.26□□□□□ -0.13
ARHGEF40-206ENST00000555232 STAP2Q9UGK3 403 aa14.26□□□□□ -0.13
ARHGEF40-206ENST00000555232 KIAA1210Q9ULL0 1709 aa14.26□□□□□ -0.13
ARHGEF40-206ENST00000555232 FGAP02671 866 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms