RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 PDIA6Q15084 440 aa13.86□□□□□ -0.19
XRCC3-208ENST00000554811 CCDC144BQ3MJ40 725 aa13.86□□□□□ -0.19
XRCC3-208ENST00000554811 MTX1Q13505 466 aa13.85□□□□□ -0.19
XRCC3-208ENST00000554811 ZSCAN25Q6NSZ9 544 aa13.85□□□□□ -0.19
XRCC3-208ENST00000554811 KBTBD3Q8NAB2 608 aa13.85□□□□□ -0.19
XRCC3-208ENST00000554811 CEMIPQ8WUJ3 1361 aa13.85□□□□□ -0.19
XRCC3-208ENST00000554811 E7EWF7 191 aa13.85□□□□□ -0.19
XRCC3-208ENST00000554811 AIFM3Q96NN9 605 aa13.85□□□□□ -0.19
XRCC3-208ENST00000554811 MTMR7Q9Y216 660 aa13.85□□□□□ -0.19
XRCC3-208ENST00000554811 PTPN14Q15678 1187 aa13.85□□□□□ -0.19
XRCC3-208ENST00000554811 IMMTQ16891 758 aaKnown RBP13.85□□□□□ -0.19
XRCC3-208ENST00000554811 CCDC69A6NI79 296 aa13.84□□□□□ -0.19
XRCC3-208ENST00000554811 STX1AQ16623 288 aa13.84□□□□□ -0.19
XRCC3-208ENST00000554811 ERBB3P21860 1342 aa13.84□□□□□ -0.19
XRCC3-208ENST00000554811 CYP27B1O15528 508 aa13.84□□□□□ -0.19
XRCC3-208ENST00000554811 PRC1O43663 620 aa13.84□□□□□ -0.19
XRCC3-208ENST00000554811 TPM3P06753 285 aa13.84□□□□□ -0.19
XRCC3-208ENST00000554811 PHKBQ93100 1093 aa13.84□□□□□ -0.19
XRCC3-208ENST00000554811 SERPINC1P01008 464 aa13.84□□□□□ -0.19
XRCC3-208ENST00000554811 HSPD1P10809 573 aaKnown RBP13.84□□□□□ -0.19
XRCC3-208ENST00000554811 CEP135Q66GS9 1140 aa13.84□□□□□ -0.19
XRCC3-208ENST00000554811 MTERF4Q7Z6M4 381 aaKnown RBP13.84□□□□□ -0.19
XRCC3-208ENST00000554811 DHX37Q8IY37 1157 aaKnown RBP13.84□□□□□ -0.19
XRCC3-208ENST00000554811 GOLPH3LQ9H4A5 285 aa13.84□□□□□ -0.19
XRCC3-208ENST00000554811 USP27XA6NNY8 438 aa13.83□□□□□ -0.2
XRCC3-208ENST00000554811 GOLGA8FQ08AF8 430 aa13.83□□□□□ -0.2
XRCC3-208ENST00000554811 GOLGA8DPQ0D2H9 430 aa13.83□□□□□ -0.2
XRCC3-208ENST00000554811 NUP133Q8WUM0 1156 aa13.83□□□□□ -0.2
XRCC3-208ENST00000554811 ZKSCAN3Q9BRR0 538 aa13.83□□□□□ -0.2
XRCC3-208ENST00000554811 SNAP23O00161 211 aa13.83□□□□□ -0.2
XRCC3-208ENST00000554811 NRDCO43847 1150 aa13.83□□□□□ -0.2
XRCC3-208ENST00000554811 SLC4A8Q2Y0W8 1093 aa13.83□□□□□ -0.2
XRCC3-208ENST00000554811 NSUN7Q8NE18 718 aaKnown RBP13.83□□□□□ -0.2
XRCC3-208ENST00000554811 CCDC94Q9BW85 323 aaPredicted RBP13.83□□□□□ -0.2
XRCC3-208ENST00000554811 ZNF213O14771 459 aa13.83□□□□□ -0.2
XRCC3-208ENST00000554811 RESTQ13127 1097 aa13.83□□□□□ -0.2
XRCC3-208ENST00000554811 LDHAL6AQ6ZMR3 332 aa13.83□□□□□ -0.2
XRCC3-208ENST00000554811 INCENPQ9NQS7 918 aa13.83□□□□□ -0.2
XRCC3-208ENST00000554811 IFNKQ9P0W0 207 aa13.83□□□□□ -0.2
XRCC3-208ENST00000554811 AGLP35573 1532 aa13.82□□□□□ -0.2
XRCC3-208ENST00000554811 M0R2C6 588 aa13.82□□□□□ -0.2
XRCC3-208ENST00000554811 ZAP70P43403 619 aa13.82□□□□□ -0.2
XRCC3-208ENST00000554811 ATP2B3Q16720 1220 aa13.82□□□□□ -0.2
XRCC3-208ENST00000554811 ANO10Q9NW15 660 aa13.82□□□□□ -0.2
XRCC3-208ENST00000554811 CLIC4Q9Y696 253 aa13.82□□□□□ -0.2
XRCC3-208ENST00000554811 CDK11BP21127 795 aaKnown RBP13.82□□□□□ -0.2
XRCC3-208ENST00000554811 TPM4P67936 248 aa13.82□□□□□ -0.2
XRCC3-208ENST00000554811 TRIM29Q14134 588 aa13.82□□□□□ -0.2
XRCC3-208ENST00000554811 CFAP100Q494V2 611 aa13.82□□□□□ -0.2
XRCC3-208ENST00000554811 CMTR1Q8N1G2 835 aaKnown RBP13.82□□□□□ -0.2
XRCC3-208ENST00000554811 ZNF710Q8N1W2 664 aa13.82□□□□□ -0.2
XRCC3-208ENST00000554811 FUCA2Q9BTY2 467 aa13.82□□□□□ -0.2
XRCC3-208ENST00000554811 NAT10Q9H0A0 1025 aaKnown RBP13.82□□□□□ -0.2
XRCC3-208ENST00000554811 ZSCAN16Q9H4T2 348 aaPredicted RBP13.82□□□□□ -0.2
XRCC3-208ENST00000554811 ZNF609O15014 1411 aa13.82□□□□□ -0.2
XRCC3-208ENST00000554811 HAUS7Q99871 368 aa13.82□□□□□ -0.2
XRCC3-208ENST00000554811 COPRSQ9NQ92 184 aa13.82□□□□□ -0.2
XRCC3-208ENST00000554811 DENND2AQ9ULE3 1009 aa13.82□□□□□ -0.2
XRCC3-208ENST00000554811 RNF113AO15541 343 aaKnown RBP13.81□□□□□ -0.2
XRCC3-208ENST00000554811 SLC3A2P08195 630 aaKnown RBP13.81□□□□□ -0.2
XRCC3-208ENST00000554811 IFIT5Q13325 482 aaKnown RBP13.81□□□□□ -0.2
XRCC3-208ENST00000554811 MRPS27Q92552 414 aaKnown RBP13.81□□□□□ -0.2
XRCC3-208ENST00000554811 OSBP2Q969R2 916 aa13.81□□□□□ -0.2
XRCC3-208ENST00000554811 SLC9C2Q5TAH2 1124 aa13.81□□□□□ -0.2
XRCC3-208ENST00000554811 MAST3O60307 1309 aa13.81□□□□□ -0.2
XRCC3-208ENST00000554811 ERICH4A6NGS2 130 aa13.8□□□□□ -0.2
XRCC3-208ENST00000554811 ADD1P35611 737 aaKnown RBP13.8□□□□□ -0.2
XRCC3-208ENST00000554811 NDUFA8P51970 172 aa13.8□□□□□ -0.2
XRCC3-208ENST00000554811 TERF1P54274 439 aa13.8□□□□□ -0.2
XRCC3-208ENST00000554811 DCAF5Q96JK2 942 aa13.8□□□□□ -0.2
XRCC3-208ENST00000554811 EPB41L2O43491 1005 aaKnown RBP13.8□□□□□ -0.2
XRCC3-208ENST00000554811 AKAP12Q02952 1782 aa13.8□□□□□ -0.2
XRCC3-208ENST00000554811 XAGE2Q96GT9 111 aa13.8□□□□□ -0.2
XRCC3-208ENST00000554811 PCDHA7Q9UN72 937 aa13.8□□□□□ -0.2
XRCC3-208ENST00000554811 EYA2O00167 538 aa13.8□□□□□ -0.2
XRCC3-208ENST00000554811 PDIA3P30101 505 aaKnown RBP13.8□□□□□ -0.2
XRCC3-208ENST00000554811 DPCR1Q3MIW9 517 aa13.8□□□□□ -0.2
XRCC3-208ENST00000554811 PLBD2Q8NHP8 589 aa13.8□□□□□ -0.2
XRCC3-208ENST00000554811 TBC1D2BQ9UPU7 963 aa13.8□□□□□ -0.2
XRCC3-208ENST00000554811 B4E1Z4 1266 aa13.79□□□□□ -0.2
XRCC3-208ENST00000554811 IL15P40933 162 aaPredicted RBP13.79□□□□□ -0.2
XRCC3-208ENST00000554811 SCARF1Q14162 830 aa13.79□□□□□ -0.2
XRCC3-208ENST00000554811 COL15A1P39059 1388 aa13.79□□□□□ -0.2
XRCC3-208ENST00000554811 PES1O00541 588 aaKnown RBP13.79□□□□□ -0.2
XRCC3-208ENST00000554811 HMGB1P09429 215 aaKnown RBP13.79□□□□□ -0.2
XRCC3-208ENST00000554811 KLHL10Q6JEL2 608 aa13.79□□□□□ -0.2
XRCC3-208ENST00000554811 CPLX2Q6PUV4 134 aaKnown RBP13.79□□□□□ -0.2
XRCC3-208ENST00000554811 KIF6Q6ZMV9 814 aa13.79□□□□□ -0.2
XRCC3-208ENST00000554811 SPTLC2O15270 562 aa13.79□□□□□ -0.2
XRCC3-208ENST00000554811 SFPQP23246 707 aaKnown RBP eCLIP13.79□□□□□ -0.2
XRCC3-208ENST00000554811 USP42Q9H9J4 1324 aaKnown RBP13.78□□□□□ -0.2
XRCC3-208ENST00000554811 hCG_1642624A0A1W2PR95 340 aa13.78□□□□□ -0.2
XRCC3-208ENST00000554811 NBPF26B4DH59 902 aa13.78□□□□□ -0.2
XRCC3-208ENST00000554811 FGAP02671 866 aa13.78□□□□□ -0.2
XRCC3-208ENST00000554811 FAM160A1Q05DH4 1040 aa13.78□□□□□ -0.2
XRCC3-208ENST00000554811 NBPF14Q5TI25 921 aa13.78□□□□□ -0.2
XRCC3-208ENST00000554811 NBPF10Q6P3W6 841 aaKnown RBP13.78□□□□□ -0.2
XRCC3-208ENST00000554811 NBPF15Q8N660 670 aa13.78□□□□□ -0.2
XRCC3-208ENST00000554811 ZCRB1Q8TBF4 217 aaKnown RBP13.78□□□□□ -0.2
XRCC3-208ENST00000554811 ALG1Q9BT22 464 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms