RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 YBX3P16989 372 aaKnown RBP eCLIP6.95□□□□□ -1.3
ATXN3-229ENST00000554672 EIF4G2P78344 907 aaKnown RBP eCLIP6.95□□□□□ -1.3
ATXN3-229ENST00000554672 NLGN2Q8NFZ4 835 aa6.95□□□□□ -1.3
ATXN3-229ENST00000554672 GTPBP3Q969Y2 492 aaKnown RBP6.95□□□□□ -1.3
ATXN3-229ENST00000554672 NLRP2Q9NX02 1062 aa6.95□□□□□ -1.3
ATXN3-229ENST00000554672 LMO7Q8WWI1 1683 aa6.95□□□□□ -1.3
ATXN3-229ENST00000554672 PARP4Q9UKK3 1724 aaKnown RBP6.95□□□□□ -1.3
ATXN3-229ENST00000554672 TTC21BQ7Z4L5 1316 aa6.95□□□□□ -1.3
ATXN3-229ENST00000554672 CENPJQ9HC77 1338 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-229ENST00000554672 MYOM1P52179 1685 aa6.94□□□□□ -1.3
ATXN3-229ENST00000554672 PEAK1Q9H792 1746 aa6.94□□□□□ -1.3
ATXN3-229ENST00000554672 CELA2BP08218 269 aaPredicted RBP6.94□□□□□ -1.3
ATXN3-229ENST00000554672 NBPF1Q3BBV0 1214 aa6.94□□□□□ -1.3
ATXN3-229ENST00000554672 TAS1R3Q7RTX0 852 aa6.94□□□□□ -1.3
ATXN3-229ENST00000554672 TIMMDC1Q9NPL8 285 aa6.94□□□□□ -1.3
ATXN3-229ENST00000554672 PNPLA7Q6ZV29 1317 aa6.94□□□□□ -1.3
ATXN3-229ENST00000554672 PHRF1Q9P1Y6 1649 aaKnown RBP6.94□□□□□ -1.3
ATXN3-229ENST00000554672 MYCP01106 439 aaPredicted RBP6.93□□□□□ -1.3
ATXN3-229ENST00000554672 F11P03951 625 aa6.93□□□□□ -1.3
ATXN3-229ENST00000554672 HMGB2P26583 209 aaKnown RBP6.93□□□□□ -1.3
ATXN3-229ENST00000554672 PHKA2P46019 1235 aa6.93□□□□□ -1.3
ATXN3-229ENST00000554672 RASSF7Q02833 373 aa6.93□□□□□ -1.3
ATXN3-229ENST00000554672 CD2APQ9Y5K6 639 aa6.93□□□□□ -1.3
ATXN3-229ENST00000554672 TTC21AQ8NDW8 1320 aa6.93□□□□□ -1.3
ATXN3-229ENST00000554672 ATP10DQ9P241 1426 aa6.93□□□□□ -1.3
ATXN3-229ENST00000554672 RGPD3A6NKT7 1758 aaPredicted RBP6.92□□□□□ -1.3
ATXN3-229ENST00000554672 RGPD4Q7Z3J3 1758 aa6.92□□□□□ -1.3
ATXN3-229ENST00000554672 ABL2P42684 1182 aa6.92□□□□□ -1.3
ATXN3-229ENST00000554672 MCM6Q14566 821 aa6.92□□□□□ -1.3
ATXN3-229ENST00000554672 SLFNL1Q499Z3 407 aa6.92□□□□□ -1.3
ATXN3-229ENST00000554672 RNF135Q8IUD6 432 aa6.92□□□□□ -1.3
ATXN3-229ENST00000554672 KCTD17Q8N5Z5 321 aa6.92□□□□□ -1.3
ATXN3-229ENST00000554672 DDX54Q8TDD1 881 aaKnown RBP6.92□□□□□ -1.3
ATXN3-229ENST00000554672 ZSCAN10Q96SZ4 725 aaPredicted RBP6.92□□□□□ -1.3
ATXN3-229ENST00000554672 ETNK1Q9HBU6 452 aa6.92□□□□□ -1.3
ATXN3-229ENST00000554672 PRM3Q9NNZ6 103 aa6.92□□□□□ -1.3
ATXN3-229ENST00000554672 MBIPQ9NS73 344 aa6.92□□□□□ -1.3
ATXN3-229ENST00000554672 DOLKQ9UPQ8 538 aa6.92□□□□□ -1.3
ATXN3-229ENST00000554672 EVC2Q86UK5 1308 aa6.92□□□□□ -1.3
ATXN3-229ENST00000554672 CPSF1Q10570 1443 aaKnown RBP6.92□□□□□ -1.3
ATXN3-229ENST00000554672 H7C1W4 665 aa6.91□□□□□ -1.3
ATXN3-229ENST00000554672 USP4Q13107 963 aa6.91□□□□□ -1.3
ATXN3-229ENST00000554672 UBAP2LQ14157 1087 aaKnown RBP6.91□□□□□ -1.3
ATXN3-229ENST00000554672 C4orf17Q53FE4 359 aa6.91□□□□□ -1.3
ATXN3-229ENST00000554672 COL23A1Q86Y22 540 aaPredicted RBP6.91□□□□□ -1.3
ATXN3-229ENST00000554672 TMEM151AQ8N4L1 468 aa6.91□□□□□ -1.3
ATXN3-229ENST00000554672 GPAMQ9HCL2 828 aa6.91□□□□□ -1.3
ATXN3-229ENST00000554672 TNS2Q63HR2 1409 aa6.91□□□□□ -1.3
ATXN3-229ENST00000554672 SLIT3O75094 1523 aa6.91□□□□□ -1.3
ATXN3-229ENST00000554672 GDF11O95390 407 aa6.9□□□□□ -1.3
ATXN3-229ENST00000554672 SCNN1DP51172 638 aa6.9□□□□□ -1.3
ATXN3-229ENST00000554672 KCNQ4P56696 695 aa6.9□□□□□ -1.3
ATXN3-229ENST00000554672 OXLD1Q5BKU9 147 aa6.9□□□□□ -1.3
ATXN3-229ENST00000554672 DNAJC5GQ8N7S2 189 aa6.9□□□□□ -1.3
ATXN3-229ENST00000554672 FLAD1Q8NFF5 587 aa6.9□□□□□ -1.3
ATXN3-229ENST00000554672 ANKRD24Q8TF21 1146 aa6.9□□□□□ -1.3
ATXN3-229ENST00000554672 ZNF526Q8TF50 670 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-229ENST00000554672 ACDQ96AP0 544 aa6.9□□□□□ -1.3
ATXN3-229ENST00000554672 SYTL4Q96C24 671 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-229ENST00000554672 NUCKS1Q9H1E3 243 aaKnown RBP6.9□□□□□ -1.3
ATXN3-229ENST00000554672 RAB3GAP2Q9H2M9 1393 aa6.9□□□□□ -1.31
ATXN3-229ENST00000554672 LRRC37A3O60309 1634 aa6.9□□□□□ -1.31
ATXN3-229ENST00000554672 LOC100996750A0A140TA64 210 aa6.89□□□□□ -1.31
ATXN3-229ENST00000554672 FOXR1Q6PIV2 292 aa6.89□□□□□ -1.31
ATXN3-229ENST00000554672 KRTAP4-6Q9BYQ5 205 aa6.89□□□□□ -1.31
ATXN3-229ENST00000554672 CCNL1Q9UK58 526 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-229ENST00000554672 COG6Q9Y2V7 657 aa6.89□□□□□ -1.31
ATXN3-229ENST00000554672 ITSN1Q15811 1721 aa6.89□□□□□ -1.31
ATXN3-229ENST00000554672 TOMM70O94826 608 aa6.88□□□□□ -1.31
ATXN3-229ENST00000554672 IRS1P35568 1242 aa6.88□□□□□ -1.31
ATXN3-229ENST00000554672 WASHC4Q2M389 1173 aa6.88□□□□□ -1.31
ATXN3-229ENST00000554672 MSL1Q68DK7 614 aa6.88□□□□□ -1.31
ATXN3-229ENST00000554672 TMEM214Q6NUQ4 689 aaKnown RBP6.88□□□□□ -1.31
ATXN3-229ENST00000554672 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.88□□□□□ -1.31
ATXN3-229ENST00000554672 PLPP7Q8NBV4 271 aa6.88□□□□□ -1.31
ATXN3-229ENST00000554672 ZCRB1Q8TBF4 217 aaKnown RBP6.88□□□□□ -1.31
ATXN3-229ENST00000554672 CHD4Q14839 1912 aa6.88□□□□□ -1.31
ATXN3-229ENST00000554672 SBF2Q86WG5 1849 aa6.87□□□□□ -1.31
ATXN3-229ENST00000554672 ADCY9O60503 1353 aa6.87□□□□□ -1.31
ATXN3-229ENST00000554672 USP31Q70CQ4 1352 aa6.87□□□□□ -1.31
ATXN3-229ENST00000554672 KTN1Q86UP2 1357 aaKnown RBP6.87□□□□□ -1.31
ATXN3-229ENST00000554672 A0A1B0GTH6 734 aa6.87□□□□□ -1.31
ATXN3-229ENST00000554672 PIK3CDO00329 1044 aa6.87□□□□□ -1.31
ATXN3-229ENST00000554672 BCRP11274 1271 aa6.87□□□□□ -1.31
ATXN3-229ENST00000554672 MX2P20592 715 aa6.87□□□□□ -1.31
ATXN3-229ENST00000554672 MARSP56192 900 aaKnown RBP6.87□□□□□ -1.31
ATXN3-229ENST00000554672 IP6K1Q92551 441 aa6.87□□□□□ -1.31
ATXN3-229ENST00000554672 TRERF1Q96PN7 1200 aa6.87□□□□□ -1.31
ATXN3-229ENST00000554672 RUBCNLQ9H714 662 aa6.87□□□□□ -1.31
ATXN3-229ENST00000554672 SHANK3Q9BYB0 1731 aa6.87□□□□□ -1.31
ATXN3-229ENST00000554672 ANKRD36BQ8N2N9 1353 aa6.86□□□□□ -1.31
ATXN3-229ENST00000554672 RNF225M0QZC1 329 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-229ENST00000554672 INHAP05111 366 aa6.86□□□□□ -1.31
ATXN3-229ENST00000554672 MSX1P28360 303 aa6.86□□□□□ -1.31
ATXN3-229ENST00000554672 MAP3K10Q02779 954 aa6.86□□□□□ -1.31
ATXN3-229ENST00000554672 MAP7D1Q3KQU3 841 aa6.86□□□□□ -1.31
ATXN3-229ENST00000554672 GNASQ5JWF2 1037 aa6.86□□□□□ -1.31
ATXN3-229ENST00000554672 NME9Q86XW9 330 aa6.86□□□□□ -1.31
ATXN3-229ENST00000554672 ZNF295-AS1Q8N0V1 137 aa6.86□□□□□ -1.31
ATXN3-229ENST00000554672 RHBDD1Q8TEB9 315 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms