RNA–Protein interactions for RNA: ENST00000554624.5

PSMC1-204, Transcript of proteasome 26S subunit, ATPase 1, humanhuman

TSL 2

Gene PSMC1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC1-204ENST00000554624 LRP10Q7Z4F1 713 aa13.02□□□□□ -0.33
PSMC1-204ENST00000554624 SUPT20HQ8NEM7 779 aa13.02□□□□□ -0.33
PSMC1-204ENST00000554624 ATP6V0A2Q9Y487 856 aa13.02□□□□□ -0.33
PSMC1-204ENST00000554624 GJA3Q9Y6H8 435 aa13.02□□□□□ -0.33
PSMC1-204ENST00000554624 CNTNAP1P78357 1384 aa13.02□□□□□ -0.33
PSMC1-204ENST00000554624 DNAJB2P25686 324 aa13.01□□□□□ -0.33
PSMC1-204ENST00000554624 TCIRG1Q13488 830 aa13.01□□□□□ -0.33
PSMC1-204ENST00000554624 DEFB115Q30KQ5 88 aa13.01□□□□□ -0.33
PSMC1-204ENST00000554624 USP50Q70EL3 339 aaPredicted RBP13.01□□□□□ -0.33
PSMC1-204ENST00000554624 COPS6Q7L5N1 327 aa13.01□□□□□ -0.33
PSMC1-204ENST00000554624 SP8Q8IXZ3 490 aa13.01□□□□□ -0.33
PSMC1-204ENST00000554624 NIM1KQ8IY84 436 aa13.01□□□□□ -0.33
PSMC1-204ENST00000554624 ABCC12Q96J65 1359 aa13.01□□□□□ -0.33
PSMC1-204ENST00000554624 COL11A2P13942 1736 aaPredicted RBP13.01□□□□□ -0.33
PSMC1-204ENST00000554624 BCORQ6W2J9 1755 aa13.01□□□□□ -0.33
PSMC1-204ENST00000554624 CCDC88AQ3V6T2 1871 aa13.01□□□□□ -0.33
PSMC1-204ENST00000554624 DICER1Q9UPY3 1922 aaKnown RBP13□□□□□ -0.33
PSMC1-204ENST00000554624 TIAM2Q8IVF5 1701 aa13□□□□□ -0.33
PSMC1-204ENST00000554624 C3orf80F5H4A9 247 aa13□□□□□ -0.33
PSMC1-204ENST00000554624 CHL1O00533 1208 aa13□□□□□ -0.33
PSMC1-204ENST00000554624 TCERG1O14776 1098 aaKnown RBP13□□□□□ -0.33
PSMC1-204ENST00000554624 VEGFBP49765 207 aa13□□□□□ -0.33
PSMC1-204ENST00000554624 MAP1SQ66K74 1059 aaPredicted RBP13□□□□□ -0.33
PSMC1-204ENST00000554624 AIDAQ96BJ3 306 aa13□□□□□ -0.33
PSMC1-204ENST00000554624 PRDM10Q9NQV6 1147 aa13□□□□□ -0.33
PSMC1-204ENST00000554624 DDX21Q9NR30 783 aaKnown RBP eCLIP13□□□□□ -0.33
PSMC1-204ENST00000554624 RASSF10A6NK89 507 aa12.99□□□□□ -0.33
PSMC1-204ENST00000554624 PPIP5K2O43314 1243 aa12.99□□□□□ -0.33
PSMC1-204ENST00000554624 CLCN1P35523 988 aa12.99□□□□□ -0.33
PSMC1-204ENST00000554624 TMC4Q7Z404 712 aa12.99□□□□□ -0.33
PSMC1-204ENST00000554624 NLRP10Q86W26 655 aa12.99□□□□□ -0.33
PSMC1-204ENST00000554624 PHOX2BQ99453 314 aa12.99□□□□□ -0.33
PSMC1-204ENST00000554624 RTFDC1Q9BY42 306 aaPredicted RBP12.99□□□□□ -0.33
PSMC1-204ENST00000554624 TRMT112Q9UI30 125 aaKnown RBP12.99□□□□□ -0.33
PSMC1-204ENST00000554624 ZNRF3Q9ULT6 936 aa12.99□□□□□ -0.33
PSMC1-204ENST00000554624 SNED1Q8TER0 1413 aa12.98□□□□□ -0.33
PSMC1-204ENST00000554624 RCCD1A6NED2 376 aa12.98□□□□□ -0.33
PSMC1-204ENST00000554624 CTCFP49711 727 aaPredicted RBP12.98□□□□□ -0.33
PSMC1-204ENST00000554624 SCNN1DP51172 638 aa12.98□□□□□ -0.33
PSMC1-204ENST00000554624 AIMP1Q12904 312 aaKnown RBP12.98□□□□□ -0.33
PSMC1-204ENST00000554624 NEUROD2Q15784 382 aa12.98□□□□□ -0.33
PSMC1-204ENST00000554624 PROSER3Q2NL68 480 aa12.98□□□□□ -0.33
PSMC1-204ENST00000554624 DDX46Q7L014 1031 aaKnown RBP12.98□□□□□ -0.33
PSMC1-204ENST00000554624 MRPL50Q8N5N7 158 aaKnown RBP12.98□□□□□ -0.33
PSMC1-204ENST00000554624 XAGE3Q8WTP9 111 aa12.98□□□□□ -0.33
PSMC1-204ENST00000554624 RUNDC1Q96C34 613 aa12.98□□□□□ -0.33
PSMC1-204ENST00000554624 SCN4AP35499 1836 aa12.97□□□□□ -0.33
PSMC1-204ENST00000554624 SH3TC1Q8TE82 1336 aa12.97□□□□□ -0.33
PSMC1-204ENST00000554624 SMAPO00193 183 aa12.97□□□□□ -0.33
PSMC1-204ENST00000554624 HOXB7P09629 217 aa12.97□□□□□ -0.33
PSMC1-204ENST00000554624 EPS15P42566 896 aa12.97□□□□□ -0.33
PSMC1-204ENST00000554624 MAP2K1Q02750 393 aaPredicted RBP12.97□□□□□ -0.33
PSMC1-204ENST00000554624 TNIP1Q15025 636 aa12.97□□□□□ -0.33
PSMC1-204ENST00000554624 WDR43Q15061 677 aaKnown RBP eCLIP12.97□□□□□ -0.33
PSMC1-204ENST00000554624 DPP8Q6V1X1 898 aaPredicted RBP12.97□□□□□ -0.33
PSMC1-204ENST00000554624 MPNDQ8N594 471 aa12.97□□□□□ -0.33
PSMC1-204ENST00000554624 ADARB2Q9NS39 739 aaKnown RBP12.97□□□□□ -0.33
PSMC1-204ENST00000554624 WBP1LQ9NX94 342 aa12.97□□□□□ -0.33
PSMC1-204ENST00000554624 MYBBP1AQ9BQG0 1328 aaKnown RBP12.96□□□□□ -0.33
PSMC1-204ENST00000554624 FOXN1O15353 648 aa12.96□□□□□ -0.33
PSMC1-204ENST00000554624 ANXA1P04083 346 aa12.96□□□□□ -0.33
PSMC1-204ENST00000554624 HCLS1P14317 486 aaPredicted RBP12.96□□□□□ -0.33
PSMC1-204ENST00000554624 CXCL9Q07325 125 aa12.96□□□□□ -0.33
PSMC1-204ENST00000554624 DDX10Q13206 875 aaKnown RBP12.96□□□□□ -0.33
PSMC1-204ENST00000554624 PLBD2Q8NHP8 589 aa12.96□□□□□ -0.33
PSMC1-204ENST00000554624 NECTIN2Q92692 538 aa12.96□□□□□ -0.33
PSMC1-204ENST00000554624 GPCPD1Q9NPB8 672 aa12.96□□□□□ -0.33
PSMC1-204ENST00000554624 GPRC5DQ9NZD1 345 aa12.96□□□□□ -0.33
PSMC1-204ENST00000554624 DBF4Q9UBU7 674 aaPredicted RBP12.96□□□□□ -0.33
PSMC1-204ENST00000554624 SEPT9Q9UHD8 586 aaPredicted RBP12.96□□□□□ -0.33
PSMC1-204ENST00000554624 ABT1Q9ULW3 272 aaKnown RBP12.96□□□□□ -0.33
PSMC1-204ENST00000554624 LAS1LQ9Y4W2 734 aaKnown RBP12.96□□□□□ -0.33
PSMC1-204ENST00000554624 ARFGEF2Q9Y6D5 1785 aa12.96□□□□□ -0.34
PSMC1-204ENST00000554624 ABCC4O15439 1325 aa12.95□□□□□ -0.34
PSMC1-204ENST00000554624 WDR33Q9C0J8 1336 aaKnown RBP12.95□□□□□ -0.34
PSMC1-204ENST00000554624 ECE1P42892 770 aa12.95□□□□□ -0.34
PSMC1-204ENST00000554624 KIAA2012Q0VF49 1180 aa12.95□□□□□ -0.34
PSMC1-204ENST00000554624 GRAPQ13588 217 aa12.95□□□□□ -0.34
PSMC1-204ENST00000554624 AOC3Q16853 763 aa12.95□□□□□ -0.34
PSMC1-204ENST00000554624 GRAPLQ8TC17 118 aaPredicted RBP12.95□□□□□ -0.34
PSMC1-204ENST00000554624 TMUB1Q9BVT8 246 aa12.95□□□□□ -0.34
PSMC1-204ENST00000554624 CHMP4AQ9BY43 222 aa12.95□□□□□ -0.34
PSMC1-204ENST00000554624 TMEM134Q9H6X4 195 aa12.95□□□□□ -0.34
PSMC1-204ENST00000554624 HYPKQ9NX55 129 aa12.95□□□□□ -0.34
PSMC1-204ENST00000554624 HSP90B1P14625 803 aaKnown RBP12.94□□□□□ -0.34
PSMC1-204ENST00000554624 BRPF1P55201 1214 aaPredicted RBP12.94□□□□□ -0.34
PSMC1-204ENST00000554624 TRIM28Q13263 835 aaKnown RBP12.94□□□□□ -0.34
PSMC1-204ENST00000554624 TTLL12Q14166 644 aaPredicted RBP12.94□□□□□ -0.34
PSMC1-204ENST00000554624 HDGFL1Q5TGJ6 251 aa12.94□□□□□ -0.34
PSMC1-204ENST00000554624 CIAPIN1Q6FI81 312 aa12.94□□□□□ -0.34
PSMC1-204ENST00000554624 CCDC146Q8IYE0 955 aa12.94□□□□□ -0.34
PSMC1-204ENST00000554624 DAXXQ9UER7 740 aaPredicted RBP12.94□□□□□ -0.34
PSMC1-204ENST00000554624 PGAP2Q9UHJ9 254 aa12.94□□□□□ -0.34
PSMC1-204ENST00000554624 ADAMTS8Q9UP79 889 aa12.94□□□□□ -0.34
PSMC1-204ENST00000554624 CDHR2Q9BYE9 1310 aa12.93□□□□□ -0.34
PSMC1-204ENST00000554624 SF3B3Q15393 1217 aaKnown RBP12.93□□□□□ -0.34
PSMC1-204ENST00000554624 CST9Q5W186 159 aa12.93□□□□□ -0.34
PSMC1-204ENST00000554624 PARP9Q8IXQ6 854 aa12.93□□□□□ -0.34
PSMC1-204ENST00000554624 BEGAINQ9BUH8 593 aa12.93□□□□□ -0.34
PSMC1-204ENST00000554624 BCL2L13Q9BXK5 485 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms