RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 PODNQ7Z5L7 613 aa13.38□□□□□ -0.27
SHMT2-213ENST00000554600 DPF2Q92785 391 aa13.38□□□□□ -0.27
SHMT2-213ENST00000554600 USP17L3A6NCW0 530 aa13.37□□□□□ -0.27
SHMT2-213ENST00000554600 USP17L4A6NCW7 530 aa13.37□□□□□ -0.27
SHMT2-213ENST00000554600 SNAP23O00161 211 aa13.37□□□□□ -0.27
SHMT2-213ENST00000554600 KLRK1P26718 216 aa13.37□□□□□ -0.27
SHMT2-213ENST00000554600 TBC1D10BQ4KMP7 808 aaPredicted RBP13.37□□□□□ -0.27
SHMT2-213ENST00000554600 USP17L1Q7RTZ2 530 aa13.37□□□□□ -0.27
SHMT2-213ENST00000554600 SAMD7Q7Z3H4 446 aa13.37□□□□□ -0.27
SHMT2-213ENST00000554600 TXNRD3Q86VQ6 643 aa13.37□□□□□ -0.27
SHMT2-213ENST00000554600 ANKRD44Q8N8A2 993 aa13.37□□□□□ -0.27
SHMT2-213ENST00000554600 TRPM4Q8TD43 1214 aa13.37□□□□□ -0.27
SHMT2-213ENST00000554600 ITGBL1O95965 494 aaPredicted RBP13.36□□□□□ -0.27
SHMT2-213ENST00000554600 VIL1P09327 827 aaKnown RBP13.36□□□□□ -0.27
SHMT2-213ENST00000554600 RSBN1LQ6PCB5 846 aaPredicted RBP13.36□□□□□ -0.27
SHMT2-213ENST00000554600 ARHGAP45Q92619 1136 aa13.36□□□□□ -0.27
SHMT2-213ENST00000554600 CLUAP1Q96AJ1 413 aa13.36□□□□□ -0.27
SHMT2-213ENST00000554600 PUS3Q9BZE2 481 aaKnown RBP13.36□□□□□ -0.27
SHMT2-213ENST00000554600 COA1Q9GZY4 146 aa13.36□□□□□ -0.27
SHMT2-213ENST00000554600 RABL6Q3YEC7 729 aaPredicted RBP13.35□□□□□ -0.27
SHMT2-213ENST00000554600 ATF7IPQ6VMQ6 1270 aa13.35□□□□□ -0.27
SHMT2-213ENST00000554600 ZNF804AQ7Z570 1209 aa13.35□□□□□ -0.27
SHMT2-213ENST00000554600 HDAC5Q9UQL6 1122 aa13.35□□□□□ -0.27
SHMT2-213ENST00000554600 PASKQ96RG2 1323 aa13.35□□□□□ -0.27
SHMT2-213ENST00000554600 TMEM88BA6NKF7 163 aa13.34□□□□□ -0.27
SHMT2-213ENST00000554600 TRIM27P14373 513 aa13.34□□□□□ -0.27
SHMT2-213ENST00000554600 HIRAP54198 1017 aaPredicted RBP13.34□□□□□ -0.27
SHMT2-213ENST00000554600 METTL24Q5JXM2 366 aa13.34□□□□□ -0.27
SHMT2-213ENST00000554600 AGBL3Q8NEM8 1001 aa13.34□□□□□ -0.27
SHMT2-213ENST00000554600 KLHDC4Q8TBB5 520 aa13.34□□□□□ -0.27
SHMT2-213ENST00000554600 MEIS3Q99687 375 aa13.34□□□□□ -0.27
SHMT2-213ENST00000554600 MXD3Q9BW11 206 aa13.34□□□□□ -0.27
SHMT2-213ENST00000554600 CREBZFQ9NS37 354 aa13.34□□□□□ -0.27
SHMT2-213ENST00000554600 MKRN1Q9UHC7 482 aaKnown RBP13.34□□□□□ -0.27
SHMT2-213ENST00000554600 TNNQ9UQP3 1299 aa13.34□□□□□ -0.27
SHMT2-213ENST00000554600 LRRFIP2Q9Y608 721 aaKnown RBP13.34□□□□□ -0.27
SHMT2-213ENST00000554600 ECM29Q5VYK3 1845 aa13.34□□□□□ -0.27
SHMT2-213ENST00000554600 TRAF5O00463 557 aa13.33□□□□□ -0.28
SHMT2-213ENST00000554600 USP17L8P0C7I0 530 aa13.33□□□□□ -0.28
SHMT2-213ENST00000554600 GTF2IP78347 998 aa13.33□□□□□ -0.28
SHMT2-213ENST00000554600 FMR1Q06787 632 aaKnown RBP eCLIP13.33□□□□□ -0.28
SHMT2-213ENST00000554600 KIF4BQ2VIQ3 1234 aa13.33□□□□□ -0.28
SHMT2-213ENST00000554600 LRRC24Q50LG9 513 aa13.33□□□□□ -0.28
SHMT2-213ENST00000554600 ZKSCAN2Q63HK3 967 aa13.33□□□□□ -0.28
SHMT2-213ENST00000554600 TTLL5Q6EMB2 1281 aa13.33□□□□□ -0.28
SHMT2-213ENST00000554600 GLIS2Q9BZE0 524 aaPredicted RBP13.33□□□□□ -0.28
SHMT2-213ENST00000554600 MROH5Q6ZUA9 1318 aa13.33□□□□□ -0.28
SHMT2-213ENST00000554600 GNAI3P08754 354 aa13.32□□□□□ -0.28
SHMT2-213ENST00000554600 UBE4AQ14139 1066 aa13.32□□□□□ -0.28
SHMT2-213ENST00000554600 DACT2Q5SW24 774 aa13.32□□□□□ -0.28
SHMT2-213ENST00000554600 STRIP1Q5VSL9 837 aa13.32□□□□□ -0.28
SHMT2-213ENST00000554600 INTS3Q68E01 1043 aaKnown RBP13.32□□□□□ -0.28
SHMT2-213ENST00000554600 FTSJ3Q8IY81 847 aaKnown RBP13.32□□□□□ -0.28
SHMT2-213ENST00000554600 OGFOD1Q8N543 542 aa13.32□□□□□ -0.28
SHMT2-213ENST00000554600 ZC3H15Q8WU90 426 aaKnown RBP13.32□□□□□ -0.28
SHMT2-213ENST00000554600 DCPSQ96C86 337 aaKnown RBP13.32□□□□□ -0.28
SHMT2-213ENST00000554600 SIL1Q9H173 461 aa13.32□□□□□ -0.28
SHMT2-213ENST00000554600 ZNF408Q9H9D4 720 aa13.32□□□□□ -0.28
SHMT2-213ENST00000554600 CD209Q9NNX6 404 aa13.32□□□□□ -0.28
SHMT2-213ENST00000554600 ABT1Q9ULW3 272 aaKnown RBP13.32□□□□□ -0.28
SHMT2-213ENST00000554600 RIPOR2Q9Y4F9 1068 aa13.32□□□□□ -0.28
SHMT2-213ENST00000554600 ARAP2Q8WZ64 1704 aa13.32□□□□□ -0.28
SHMT2-213ENST00000554600 MYO3BQ8WXR4 1341 aa13.32□□□□□ -0.28
SHMT2-213ENST00000554600 EGFRP00533 1210 aa13.31□□□□□ -0.28
SHMT2-213ENST00000554600 GYG1P46976 350 aa13.31□□□□□ -0.28
SHMT2-213ENST00000554600 C15orf52Q6ZUT6 534 aaKnown RBP13.31□□□□□ -0.28
SHMT2-213ENST00000554600 PAXIP1Q6ZW49 1069 aaPredicted RBP13.31□□□□□ -0.28
SHMT2-213ENST00000554600 CDC37L1Q7L3B6 337 aa13.31□□□□□ -0.28
SHMT2-213ENST00000554600 USP48Q86UV5 1035 aa13.31□□□□□ -0.28
SHMT2-213ENST00000554600 VPS37DQ86XT2 251 aa13.31□□□□□ -0.28
SHMT2-213ENST00000554600 PCDH10Q9P2E7 1040 aa13.31□□□□□ -0.28
SHMT2-213ENST00000554600 JAG2Q9Y219 1238 aa13.31□□□□□ -0.28
SHMT2-213ENST00000554600 ZNF609O15014 1411 aa13.3□□□□□ -0.28
SHMT2-213ENST00000554600 EYA2O00167 538 aa13.3□□□□□ -0.28
SHMT2-213ENST00000554600 KRT26Q7Z3Y9 468 aa13.3□□□□□ -0.28
SHMT2-213ENST00000554600 KIAA0825Q8IV33 1275 aa13.3□□□□□ -0.28
SHMT2-213ENST00000554600 GMLQ99445 158 aa13.3□□□□□ -0.28
SHMT2-213ENST00000554600 MYOZ2Q9NPC6 264 aa13.3□□□□□ -0.28
SHMT2-213ENST00000554600 GGA3Q9NZ52 723 aa13.3□□□□□ -0.28
SHMT2-213ENST00000554600 HDAC9Q9UKV0 1011 aa13.3□□□□□ -0.28
SHMT2-213ENST00000554600 FRAT2O75474 233 aaPredicted RBP13.29□□□□□ -0.28
SHMT2-213ENST00000554600 CELF2O95319 508 aaKnown RBP13.29□□□□□ -0.28
SHMT2-213ENST00000554600 HIBADHP31937 336 aaKnown RBP13.29□□□□□ -0.28
SHMT2-213ENST00000554600 RFX5P48382 616 aaPredicted RBP13.29□□□□□ -0.28
SHMT2-213ENST00000554600 ZNF280AP59817 542 aaPredicted RBP13.29□□□□□ -0.28
SHMT2-213ENST00000554600 SCARF1Q14162 830 aa13.29□□□□□ -0.28
SHMT2-213ENST00000554600 SULF1Q8IWU6 871 aa13.29□□□□□ -0.28
SHMT2-213ENST00000554600 TMEM57Q8N5G2 664 aa13.29□□□□□ -0.28
SHMT2-213ENST00000554600 PGAP2Q9UHJ9 254 aa13.29□□□□□ -0.28
SHMT2-213ENST00000554600 IRS2Q9Y4H2 1338 aa13.29□□□□□ -0.28
SHMT2-213ENST00000554600 F8W031 263 aaPredicted RBP13.28□□□□□ -0.28
SHMT2-213ENST00000554600 PDE8BO95263 885 aa13.28□□□□□ -0.28
SHMT2-213ENST00000554600 GNAI2P04899 355 aa13.28□□□□□ -0.28
SHMT2-213ENST00000554600 IL1R1P14778 569 aa13.28□□□□□ -0.28
SHMT2-213ENST00000554600 PTPN12Q05209 780 aaKnown RBP13.28□□□□□ -0.28
SHMT2-213ENST00000554600 GRM1Q13255 1194 aa13.28□□□□□ -0.28
SHMT2-213ENST00000554600 CAVIN4Q5BKX8 364 aa13.28□□□□□ -0.28
SHMT2-213ENST00000554600 ANGEL2Q5VTE6 544 aaKnown RBP13.28□□□□□ -0.28
SHMT2-213ENST00000554600 ITPRIPQ8IWB1 547 aa13.28□□□□□ -0.28
SHMT2-213ENST00000554600 DZIP1LQ8IYY4 767 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms