RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-204ENST00000554574 SF3A1Q15459 793 aaKnown RBP6.57□□□□□ -1.36
PPP4R3A-204ENST00000554574 PDE12Q6L8Q7 609 aaKnown RBP6.57□□□□□ -1.36
PPP4R3A-204ENST00000554574 OSBPL7Q9BZF2 842 aa6.57□□□□□ -1.36
PPP4R3A-204ENST00000554574 POLR1AO95602 1720 aaPredicted RBP6.57□□□□□ -1.36
PPP4R3A-204ENST00000554574 GLI2P10070 1586 aa6.57□□□□□ -1.36
PPP4R3A-204ENST00000554574 KDM5CP41229 1560 aa6.57□□□□□ -1.36
PPP4R3A-204ENST00000554574 ZNF518AQ6AHZ1 1483 aa6.57□□□□□ -1.36
PPP4R3A-204ENST00000554574 TYRO3Q06418 890 aa6.56□□□□□ -1.36
PPP4R3A-204ENST00000554574 WDR44Q5JSH3 913 aa6.56□□□□□ -1.36
PPP4R3A-204ENST00000554574 ACBD3Q9H3P7 528 aa6.56□□□□□ -1.36
PPP4R3A-204ENST00000554574 CCSER2Q9H7U1 834 aa6.56□□□□□ -1.36
PPP4R3A-204ENST00000554574 ELP3Q9H9T3 547 aa6.56□□□□□ -1.36
PPP4R3A-204ENST00000554574 ZFYVE28Q9HCC9 887 aa6.56□□□□□ -1.36
PPP4R3A-204ENST00000554574 NEUROD4Q9HD90 331 aa6.56□□□□□ -1.36
PPP4R3A-204ENST00000554574 TIMMDC1Q9NPL8 285 aa6.56□□□□□ -1.36
PPP4R3A-204ENST00000554574 FNDC3AQ9Y2H6 1198 aaKnown RBP6.56□□□□□ -1.36
PPP4R3A-204ENST00000554574 CD109Q6YHK3 1445 aa6.56□□□□□ -1.36
PPP4R3A-204ENST00000554574 SCAPERQ9BY12 1400 aa6.56□□□□□ -1.36
PPP4R3A-204ENST00000554574 SPAG9O60271 1321 aaKnown RBP6.56□□□□□ -1.36
PPP4R3A-204ENST00000554574 A0A1B0GTH6 734 aa6.56□□□□□ -1.36
PPP4R3A-204ENST00000554574 C12orf49Q9H741 205 aa6.56□□□□□ -1.36
PPP4R3A-204ENST00000554574 NEO1Q92859 1461 aa6.56□□□□□ -1.36
PPP4R3A-204ENST00000554574 BCORL1Q5H9F3 1711 aa6.56□□□□□ -1.36
PPP4R3A-204ENST00000554574 HECW2Q9P2P5 1572 aa6.55□□□□□ -1.36
PPP4R3A-204ENST00000554574 A0A1W2PNR3 127 aa6.55□□□□□ -1.36
PPP4R3A-204ENST00000554574 PHACTR2O75167 634 aa6.55□□□□□ -1.36
PPP4R3A-204ENST00000554574 POLR3DP05423 398 aaPredicted RBP6.55□□□□□ -1.36
PPP4R3A-204ENST00000554574 MRPL14Q6P1L8 145 aaKnown RBP6.55□□□□□ -1.36
PPP4R3A-204ENST00000554574 UBXN4Q92575 508 aa6.55□□□□□ -1.36
PPP4R3A-204ENST00000554574 CHRDQ9H2X0 955 aa6.55□□□□□ -1.36
PPP4R3A-204ENST00000554574 CAPN10Q9HC96 672 aa6.55□□□□□ -1.36
PPP4R3A-204ENST00000554574 NPHS2Q9NP85 383 aa6.55□□□□□ -1.36
PPP4R3A-204ENST00000554574 RICTORQ6R327 1708 aa6.55□□□□□ -1.36
PPP4R3A-204ENST00000554574 E9PCH4 1651 aa6.55□□□□□ -1.36
PPP4R3A-204ENST00000554574 TET3O43151 1660 aa6.55□□□□□ -1.36
PPP4R3A-204ENST00000554574 SPHKAPQ2M3C7 1700 aa6.55□□□□□ -1.36
PPP4R3A-204ENST00000554574 TTLL8A6PVC2 850 aa6.54□□□□□ -1.36
PPP4R3A-204ENST00000554574 TNNI2P48788 182 aa6.54□□□□□ -1.36
PPP4R3A-204ENST00000554574 ZNF394Q53GI3 561 aa6.54□□□□□ -1.36
PPP4R3A-204ENST00000554574 AFAP1Q8N556 730 aa6.54□□□□□ -1.36
PPP4R3A-204ENST00000554574 GPAMQ9HCL2 828 aa6.54□□□□□ -1.36
PPP4R3A-204ENST00000554574 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.54□□□□□ -1.36
PPP4R3A-204ENST00000554574 PCDHGB7Q9Y5F8 929 aa6.54□□□□□ -1.36
PPP4R3A-204ENST00000554574 VWDEQ8N2E2 1590 aa6.54□□□□□ -1.36
PPP4R3A-204ENST00000554574 PRDM15P57071 1507 aaPredicted RBP6.54□□□□□ -1.36
PPP4R3A-204ENST00000554574 ATP10AO60312 1499 aa6.54□□□□□ -1.36
PPP4R3A-204ENST00000554574 RNF17Q9BXT8 1623 aaKnown RBP6.54□□□□□ -1.36
PPP4R3A-204ENST00000554574 XYLBO75191 536 aa6.54□□□□□ -1.36
PPP4R3A-204ENST00000554574 MEI1Q5TIA1 1274 aa6.54□□□□□ -1.36
PPP4R3A-204ENST00000554574 CEP63Q96MT8 703 aa6.54□□□□□ -1.36
PPP4R3A-204ENST00000554574 NLRP2Q9NX02 1062 aa6.54□□□□□ -1.36
PPP4R3A-204ENST00000554574 CNTN3Q9P232 1028 aa6.54□□□□□ -1.36
PPP4R3A-204ENST00000554574 POGZQ7Z3K3 1410 aa6.54□□□□□ -1.36
PPP4R3A-204ENST00000554574 DIP2BQ9P265 1576 aa6.54□□□□□ -1.36
PPP4R3A-204ENST00000554574 MROH1Q8NDA8 1641 aa6.53□□□□□ -1.36
PPP4R3A-204ENST00000554574 FIGNL2A6NMB9 653 aa6.53□□□□□ -1.36
PPP4R3A-204ENST00000554574 EREGO14944 169 aa6.53□□□□□ -1.36
PPP4R3A-204ENST00000554574 CEP152O94986 1710 aa6.53□□□□□ -1.36
PPP4R3A-204ENST00000554574 BMP1P13497 986 aa6.53□□□□□ -1.36
PPP4R3A-204ENST00000554574 C1orf127Q8N9H9 656 aa6.53□□□□□ -1.36
PPP4R3A-204ENST00000554574 RUBCNLQ9H714 662 aa6.53□□□□□ -1.36
PPP4R3A-204ENST00000554574 MLH3Q9UHC1 1453 aa6.53□□□□□ -1.36
PPP4R3A-204ENST00000554574 KIF13AQ9H1H9 1805 aa6.52□□□□□ -1.36
PPP4R3A-204ENST00000554574 EPB42P16452 691 aa6.52□□□□□ -1.37
PPP4R3A-204ENST00000554574 RACK1P63244 317 aaKnown RBP6.52□□□□□ -1.37
PPP4R3A-204ENST00000554574 CYB5RLQ6IPT4 315 aa6.52□□□□□ -1.37
PPP4R3A-204ENST00000554574 TANGO6Q9C0B7 1094 aa6.52□□□□□ -1.37
PPP4R3A-204ENST00000554574 CRISPLD1Q9H336 500 aa6.52□□□□□ -1.37
PPP4R3A-204ENST00000554574 DDX41Q9UJV9 622 aaKnown RBP6.52□□□□□ -1.37
PPP4R3A-204ENST00000554574 TSPOAP1O95153 1857 aa6.52□□□□□ -1.37
PPP4R3A-204ENST00000554574 SOS2Q07890 1332 aaPredicted RBP6.52□□□□□ -1.37
PPP4R3A-204ENST00000554574 PPRC1Q5VV67 1664 aaKnown RBP6.52□□□□□ -1.37
PPP4R3A-204ENST00000554574 GIPC1O14908 333 aa6.52□□□□□ -1.37
PPP4R3A-204ENST00000554574 USP17L7P0C7H9 530 aa6.52□□□□□ -1.37
PPP4R3A-204ENST00000554574 PTPN12Q05209 780 aaKnown RBP6.52□□□□□ -1.37
PPP4R3A-204ENST00000554574 NXPE4Q6UWF7 544 aa6.52□□□□□ -1.37
PPP4R3A-204ENST00000554574 SLC43A3Q8NBI5 491 aa6.52□□□□□ -1.37
PPP4R3A-204ENST00000554574 BCO2Q9BYV7 579 aa6.52□□□□□ -1.37
PPP4R3A-204ENST00000554574 ZCCHC2Q9C0B9 1178 aaKnown RBP6.52□□□□□ -1.37
PPP4R3A-204ENST00000554574 ABI2Q9NYB9 513 aaPredicted RBP6.52□□□□□ -1.37
PPP4R3A-204ENST00000554574 GJA3Q9Y6H8 435 aa6.52□□□□□ -1.37
PPP4R3A-204ENST00000554574 ABCA6Q8N139 1617 aa6.52□□□□□ -1.37
PPP4R3A-204ENST00000554574 USP31Q70CQ4 1352 aa6.52□□□□□ -1.37
PPP4R3A-204ENST00000554574 EGFRP00533 1210 aa6.51□□□□□ -1.37
PPP4R3A-204ENST00000554574 TRIM46Q7Z4K8 759 aa6.51□□□□□ -1.37
PPP4R3A-204ENST00000554574 USP48Q86UV5 1035 aa6.51□□□□□ -1.37
PPP4R3A-204ENST00000554574 GALNT12Q8IXK2 581 aa6.51□□□□□ -1.37
PPP4R3A-204ENST00000554574 SRA1Q9HD15 236 aaKnown RBP6.51□□□□□ -1.37
PPP4R3A-204ENST00000554574 BRD7Q9NPI1 651 aa6.51□□□□□ -1.37
PPP4R3A-204ENST00000554574 FAM8A1Q9UBU6 413 aa6.51□□□□□ -1.37
PPP4R3A-204ENST00000554574 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.51□□□□□ -1.37
PPP4R3A-204ENST00000554574 DHX29Q7Z478 1369 aaKnown RBP6.51□□□□□ -1.37
PPP4R3A-204ENST00000554574 PLA2R1Q13018 1463 aa6.51□□□□□ -1.37
PPP4R3A-204ENST00000554574 CCDC144AA2RUR9 1427 aa6.51□□□□□ -1.37
PPP4R3A-204ENST00000554574 UHRF1BP1Q6BDS2 1440 aa6.51□□□□□ -1.37
PPP4R3A-204ENST00000554574 HS2ST1Q7LGA3 356 aa6.5□□□□□ -1.37
PPP4R3A-204ENST00000554574 NLRP13Q86W25 1043 aa6.5□□□□□ -1.37
PPP4R3A-204ENST00000554574 PRKAG2Q9UGJ0 569 aa6.5□□□□□ -1.37
PPP4R3A-204ENST00000554574 GGT7Q9UJ14 662 aa6.5□□□□□ -1.37
PPP4R3A-204ENST00000554574 FRMPD1Q5SYB0 1578 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms