RNA–Protein interactions for RNA: ENST00000554546.5

NUMB-212, Transcript of NUMB, endocytic adaptor protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NUMB, Length 3,607 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-212ENST00000554546 SNCBQ16143 134 aa12.94□□□□□ -0.34
NUMB-212ENST00000554546 CAPRIN2Q6IMN6 1127 aaKnown RBP12.94□□□□□ -0.34
NUMB-212ENST00000554546 TSHZ1Q6ZSZ6 1077 aa12.94□□□□□ -0.34
NUMB-212ENST00000554546 ARHGEF11O15085 1522 aa12.94□□□□□ -0.34
NUMB-212ENST00000554546 MAGI3Q5TCQ9 1506 aa12.94□□□□□ -0.34
NUMB-212ENST00000554546 GJB2P29033 226 aa12.93□□□□□ -0.34
NUMB-212ENST00000554546 TPP2P29144 1249 aaPredicted RBP12.93□□□□□ -0.34
NUMB-212ENST00000554546 RNF187Q5TA31 235 aaPredicted RBP12.93□□□□□ -0.34
NUMB-212ENST00000554546 AOPEPQ8N6M6 819 aa12.93□□□□□ -0.34
NUMB-212ENST00000554546 TBC1D5Q92609 795 aa12.93□□□□□ -0.34
NUMB-212ENST00000554546 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.93□□□□□ -0.34
NUMB-212ENST00000554546 KIF4AO95239 1232 aa12.93□□□□□ -0.34
NUMB-212ENST00000554546 SLC8A3P57103 927 aa12.93□□□□□ -0.34
NUMB-212ENST00000554546 RBM43Q6ZSC3 357 aaKnown RBP12.93□□□□□ -0.34
NUMB-212ENST00000554546 SPATA21Q7Z572 469 aa12.93□□□□□ -0.34
NUMB-212ENST00000554546 MSL3Q8N5Y2 521 aaKnown RBP12.93□□□□□ -0.34
NUMB-212ENST00000554546 ZEB2O60315 1214 aa12.92□□□□□ -0.34
NUMB-212ENST00000554546 VSNL1P62760 191 aa12.92□□□□□ -0.34
NUMB-212ENST00000554546 ATP6V0A4Q9HBG4 840 aa12.92□□□□□ -0.34
NUMB-212ENST00000554546 SYF2O95926 243 aaKnown RBP12.92□□□□□ -0.34
NUMB-212ENST00000554546 USP5P45974 858 aa12.92□□□□□ -0.34
NUMB-212ENST00000554546 CCDC83Q8IWF9 413 aa12.92□□□□□ -0.34
NUMB-212ENST00000554546 PROCA1Q8NCQ7 364 aaPredicted RBP12.92□□□□□ -0.34
NUMB-212ENST00000554546 OR8K1Q8NGG5 319 aa12.92□□□□□ -0.34
NUMB-212ENST00000554546 ARHGEF1Q92888 912 aaKnown RBP12.92□□□□□ -0.34
NUMB-212ENST00000554546 SPATA32Q96LK8 384 aa12.92□□□□□ -0.34
NUMB-212ENST00000554546 XPO4Q9C0E2 1151 aaKnown RBP12.92□□□□□ -0.34
NUMB-212ENST00000554546 IFNKQ9P0W0 207 aa12.92□□□□□ -0.34
NUMB-212ENST00000554546 TBC1D2BQ9UPU7 963 aa12.92□□□□□ -0.34
NUMB-212ENST00000554546 CDHR2Q9BYE9 1310 aa12.92□□□□□ -0.34
NUMB-212ENST00000554546 NOS1P29475 1434 aa12.92□□□□□ -0.34
NUMB-212ENST00000554546 FCHSD2O94868 740 aa12.92□□□□□ -0.34
NUMB-212ENST00000554546 ZNF202O95125 648 aa12.92□□□□□ -0.34
NUMB-212ENST00000554546 PAX3P23760 479 aa12.92□□□□□ -0.34
NUMB-212ENST00000554546 KCNJ6P48051 423 aa12.92□□□□□ -0.34
NUMB-212ENST00000554546 SMTNP53814 917 aa12.92□□□□□ -0.34
NUMB-212ENST00000554546 GBP3Q9H0R5 595 aa12.92□□□□□ -0.34
NUMB-212ENST00000554546 VWA3AA6NCI4 1184 aa12.91□□□□□ -0.34
NUMB-212ENST00000554546 MEFVO15553 781 aaPredicted RBP12.91□□□□□ -0.34
NUMB-212ENST00000554546 PRPF6O94906 941 aaKnown RBP12.91□□□□□ -0.34
NUMB-212ENST00000554546 IMPDH2P12268 514 aa12.91□□□□□ -0.34
NUMB-212ENST00000554546 STX1AQ16623 288 aa12.91□□□□□ -0.34
NUMB-212ENST00000554546 DHX40Q8IX18 779 aaKnown RBP12.91□□□□□ -0.34
NUMB-212ENST00000554546 FAM76AQ8TAV0 307 aa12.91□□□□□ -0.34
NUMB-212ENST00000554546 PLEKHG4BQ96PX9 1271 aa12.91□□□□□ -0.34
NUMB-212ENST00000554546 YIPF2Q9BWQ6 316 aa12.91□□□□□ -0.34
NUMB-212ENST00000554546 ZCWPW1Q9H0M4 648 aa12.91□□□□□ -0.34
NUMB-212ENST00000554546 HOMER3Q9NSC5 361 aa12.91□□□□□ -0.34
NUMB-212ENST00000554546 CDC25CP30307 473 aa12.91□□□□□ -0.34
NUMB-212ENST00000554546 PSME1Q06323 249 aa12.91□□□□□ -0.34
NUMB-212ENST00000554546 ESYT1Q9BSJ8 1104 aa12.91□□□□□ -0.34
NUMB-212ENST00000554546 SLC40A1Q9NP59 571 aa12.91□□□□□ -0.34
NUMB-212ENST00000554546 GNGT1P63211 74 aa12.9□□□□□ -0.34
NUMB-212ENST00000554546 AMOTQ4VCS5 1084 aa12.9□□□□□ -0.34
NUMB-212ENST00000554546 CCDC12Q8WUD4 166 aaPredicted RBP12.9□□□□□ -0.34
NUMB-212ENST00000554546 EPAS1Q99814 870 aa12.9□□□□□ -0.34
NUMB-212ENST00000554546 TSPYL2Q9H2G4 693 aaPredicted RBP12.9□□□□□ -0.34
NUMB-212ENST00000554546 DCTPP1Q9H773 170 aa12.9□□□□□ -0.34
NUMB-212ENST00000554546 RAB21Q9UL25 225 aa12.9□□□□□ -0.34
NUMB-212ENST00000554546 POTEB2H3BUK9 544 aa12.9□□□□□ -0.34
NUMB-212ENST00000554546 PES1O00541 588 aaKnown RBP12.9□□□□□ -0.34
NUMB-212ENST00000554546 NDUFAB1O14561 156 aa12.9□□□□□ -0.34
NUMB-212ENST00000554546 FMNL1O95466 1100 aaPredicted RBP12.9□□□□□ -0.34
NUMB-212ENST00000554546 U2AF1L5P0DN76 240 aaPredicted RBP12.9□□□□□ -0.34
NUMB-212ENST00000554546 U2AF1Q01081 240 aaKnown RBP eCLIP12.9□□□□□ -0.34
NUMB-212ENST00000554546 TMEM132AQ24JP5 1023 aa12.9□□□□□ -0.34
NUMB-212ENST00000554546 SLC30A9Q6PML9 568 aa12.9□□□□□ -0.34
NUMB-212ENST00000554546 ARL10Q8N8L6 244 aa12.9□□□□□ -0.34
NUMB-212ENST00000554546 ZSCAN9O15535 394 aaPredicted RBP12.9□□□□□ -0.34
NUMB-212ENST00000554546 ZSCAN12O43309 604 aa12.9□□□□□ -0.34
NUMB-212ENST00000554546 EPB41L2O43491 1005 aaKnown RBP12.9□□□□□ -0.34
NUMB-212ENST00000554546 ARHGAP25P42331 645 aa12.9□□□□□ -0.34
NUMB-212ENST00000554546 B4GALNT4Q76KP1 1039 aa12.9□□□□□ -0.34
NUMB-212ENST00000554546 SRGAP1Q7Z6B7 1085 aa12.9□□□□□ -0.34
NUMB-212ENST00000554546 PARP9Q8IXQ6 854 aa12.9□□□□□ -0.34
NUMB-212ENST00000554546 MAB21L3Q8N8X9 362 aa12.9□□□□□ -0.34
NUMB-212ENST00000554546 TSPAN18Q96SJ8 248 aa12.9□□□□□ -0.34
NUMB-212ENST00000554546 CAPS2Q9BXY5 557 aa12.9□□□□□ -0.34
NUMB-212ENST00000554546 SLC39A2Q9NP94 309 aa12.9□□□□□ -0.34
NUMB-212ENST00000554546 POLR3AO14802 1390 aaPredicted RBP12.9□□□□□ -0.35
NUMB-212ENST00000554546 IL16Q14005 1332 aa12.9□□□□□ -0.35
NUMB-212ENST00000554546 RBM47A0AV96 593 aaKnown RBP12.89□□□□□ -0.35
NUMB-212ENST00000554546 SHOX2O60902 331 aaPredicted RBP12.89□□□□□ -0.35
NUMB-212ENST00000554546 RASSF9O75901 435 aa12.89□□□□□ -0.35
NUMB-212ENST00000554546 GOLGA8FQ08AF8 430 aa12.89□□□□□ -0.35
NUMB-212ENST00000554546 GOLGA8DPQ0D2H9 430 aa12.89□□□□□ -0.35
NUMB-212ENST00000554546 ZRSR2Q15696 482 aaKnown RBP12.89□□□□□ -0.35
NUMB-212ENST00000554546 FILIP1LQ4L180 1135 aa12.89□□□□□ -0.35
NUMB-212ENST00000554546 TSHZ3Q63HK5 1081 aa12.89□□□□□ -0.35
NUMB-212ENST00000554546 FAM228AQ86W67 206 aa12.89□□□□□ -0.35
NUMB-212ENST00000554546 FMNL2Q96PY5 1086 aa12.89□□□□□ -0.35
NUMB-212ENST00000554546 SETD1BQ9UPS6 1966 aaKnown RBP12.89□□□□□ -0.35
NUMB-212ENST00000554546 NPHP3Q7Z494 1330 aa12.89□□□□□ -0.35
NUMB-212ENST00000554546 HMMRO75330 724 aa12.89□□□□□ -0.35
NUMB-212ENST00000554546 TTLL7Q6ZT98 887 aa12.89□□□□□ -0.35
NUMB-212ENST00000554546 REREQ9P2R6 1566 aa12.89□□□□□ -0.35
NUMB-212ENST00000554546 AK2P54819 239 aa12.89□□□□□ -0.35
NUMB-212ENST00000554546 ACCSLQ4AC99 568 aa12.89□□□□□ -0.35
NUMB-212ENST00000554546 KIAA0825Q8IV33 1275 aa12.89□□□□□ -0.35
NUMB-212ENST00000554546 LRRCC1Q9C099 1032 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms