RNA–Protein interactions for RNA: ENST00000553889.5

PRKCH-209, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-209ENST00000553889 TTC39AQ5SRH9 613 aa10.93□□□□□ -0.66
PRKCH-209ENST00000553889 STOX1Q6ZVD7 989 aa10.93□□□□□ -0.66
PRKCH-209ENST00000553889 SEC62Q99442 399 aaKnown RBP10.93□□□□□ -0.66
PRKCH-209ENST00000553889 RRAGDQ9NQL2 400 aaPredicted RBP10.93□□□□□ -0.66
PRKCH-209ENST00000553889 CNPY2Q9Y2B0 182 aa10.93□□□□□ -0.66
PRKCH-209ENST00000553889 ZBTB1Q9Y2K1 713 aa10.93□□□□□ -0.66
PRKCH-209ENST00000553889 SPATA31A5Q5VU36 1347 aa10.92□□□□□ -0.66
PRKCH-209ENST00000553889 SPATA31A7Q8IWB4 1347 aa10.92□□□□□ -0.66
PRKCH-209ENST00000553889 SYCE3A1L190 88 aa10.92□□□□□ -0.66
PRKCH-209ENST00000553889 E7EWF7 191 aa10.92□□□□□ -0.66
PRKCH-209ENST00000553889 IRS4O14654 1257 aaPredicted RBP10.92□□□□□ -0.66
PRKCH-209ENST00000553889 FOXP2O15409 715 aa10.92□□□□□ -0.66
PRKCH-209ENST00000553889 PDE8BO95263 885 aa10.92□□□□□ -0.66
PRKCH-209ENST00000553889 ITGA6P23229 1130 aa10.92□□□□□ -0.66
PRKCH-209ENST00000553889 INTS5Q6P9B9 1019 aaKnown RBP10.92□□□□□ -0.66
PRKCH-209ENST00000553889 LDHAL6AQ6ZMR3 332 aa10.92□□□□□ -0.66
PRKCH-209ENST00000553889 Q6ZUG5 572 aa10.92□□□□□ -0.66
PRKCH-209ENST00000553889 NECAB1Q8N987 351 aa10.92□□□□□ -0.66
PRKCH-209ENST00000553889 SMARCC1Q92922 1105 aaPredicted RBP10.92□□□□□ -0.66
PRKCH-209ENST00000553889 OSBP2Q969R2 916 aa10.92□□□□□ -0.66
PRKCH-209ENST00000553889 TRIM44Q96DX7 344 aaPredicted RBP10.92□□□□□ -0.66
PRKCH-209ENST00000553889 CHAMP1Q96JM3 812 aa10.92□□□□□ -0.66
PRKCH-209ENST00000553889 FUCA2Q9BTY2 467 aa10.92□□□□□ -0.66
PRKCH-209ENST00000553889 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.92□□□□□ -0.66
PRKCH-209ENST00000553889 CCDC87Q9NVE4 849 aa10.92□□□□□ -0.66
PRKCH-209ENST00000553889 MYH7P12883 1935 aa10.92□□□□□ -0.66
PRKCH-209ENST00000553889 LAMA4Q16363 1823 aa10.91□□□□□ -0.66
PRKCH-209ENST00000553889 DNM1Q05193 864 aaKnown RBP10.91□□□□□ -0.66
PRKCH-209ENST00000553889 RESTQ13127 1097 aa10.91□□□□□ -0.66
PRKCH-209ENST00000553889 TAF7LQ5H9L4 462 aa10.91□□□□□ -0.66
PRKCH-209ENST00000553889 GORABQ5T7V8 394 aa10.91□□□□□ -0.66
PRKCH-209ENST00000553889 FOXD4L5Q5VV16 416 aaPredicted RBP10.91□□□□□ -0.66
PRKCH-209ENST00000553889 CLEC4GQ6UXB4 293 aa10.91□□□□□ -0.66
PRKCH-209ENST00000553889 CCDC129Q6ZRS4 1044 aa10.91□□□□□ -0.66
PRKCH-209ENST00000553889 RBM43Q6ZSC3 357 aaKnown RBP10.91□□□□□ -0.66
PRKCH-209ENST00000553889 ZSCAN30Q86W11 494 aa10.91□□□□□ -0.66
PRKCH-209ENST00000553889 DZIP3Q86Y13 1208 aaKnown RBP10.91□□□□□ -0.66
PRKCH-209ENST00000553889 NSUN7Q8NE18 718 aaKnown RBP10.91□□□□□ -0.66
PRKCH-209ENST00000553889 FOXD4L4Q8WXT5 416 aaPredicted RBP10.91□□□□□ -0.66
PRKCH-209ENST00000553889 LPIN2Q92539 896 aa10.91□□□□□ -0.66
PRKCH-209ENST00000553889 GREM2Q9H772 168 aa10.91□□□□□ -0.66
PRKCH-209ENST00000553889 TRMT112Q9UI30 125 aaKnown RBP10.91□□□□□ -0.66
PRKCH-209ENST00000553889 DOT1LQ8TEK3 1739 aa10.91□□□□□ -0.66
PRKCH-209ENST00000553889 LAMB2P55268 1798 aa10.9□□□□□ -0.66
PRKCH-209ENST00000553889 DDX60Q8IY21 1712 aaKnown RBP10.9□□□□□ -0.66
PRKCH-209ENST00000553889 CAMTA2O94983 1202 aa10.9□□□□□ -0.66
PRKCH-209ENST00000553889 ADORA1P30542 326 aa10.9□□□□□ -0.66
PRKCH-209ENST00000553889 ADD2P35612 726 aa10.9□□□□□ -0.66
PRKCH-209ENST00000553889 DDB1Q16531 1140 aa10.9□□□□□ -0.66
PRKCH-209ENST00000553889 MTA3Q9BTC8 594 aa10.9□□□□□ -0.66
PRKCH-209ENST00000553889 NOL7Q9UMY1 257 aaKnown RBP10.9□□□□□ -0.66
PRKCH-209ENST00000553889 NDUFB9Q9Y6M9 179 aa10.9□□□□□ -0.66
PRKCH-209ENST00000553889 CARMIL3Q8ND23 1372 aa10.9□□□□□ -0.67
PRKCH-209ENST00000553889 UBN2Q6ZU65 1347 aa10.89□□□□□ -0.67
PRKCH-209ENST00000553889 M0R2C6 588 aa10.89□□□□□ -0.67
PRKCH-209ENST00000553889 PDIA3P30101 505 aaKnown RBP10.89□□□□□ -0.67
PRKCH-209ENST00000553889 ZAP70P43403 619 aa10.89□□□□□ -0.67
PRKCH-209ENST00000553889 PUM3Q15397 648 aaKnown RBP10.89□□□□□ -0.67
PRKCH-209ENST00000553889 IMMTQ16891 758 aaKnown RBP10.89□□□□□ -0.67
PRKCH-209ENST00000553889 METTL24Q5JXM2 366 aa10.89□□□□□ -0.67
PRKCH-209ENST00000553889 CDC37L1Q7L3B6 337 aa10.89□□□□□ -0.67
PRKCH-209ENST00000553889 TTC6Q86TZ1 520 aa10.89□□□□□ -0.67
PRKCH-209ENST00000553889 MB21D2Q8IYB1 491 aaPredicted RBP10.89□□□□□ -0.67
PRKCH-209ENST00000553889 BRF1Q92994 677 aa10.89□□□□□ -0.67
PRKCH-209ENST00000553889 LARP6Q9BRS8 491 aaKnown RBP10.89□□□□□ -0.67
PRKCH-209ENST00000553889 GDPD2Q9HCC8 539 aa10.89□□□□□ -0.67
PRKCH-209ENST00000553889 DDX19AQ9NUU7 478 aaKnown RBP10.89□□□□□ -0.67
PRKCH-209ENST00000553889 RCOR1Q9UKL0 485 aa10.89□□□□□ -0.67
PRKCH-209ENST00000553889 VPS37CA5D8V6 355 aaPredicted RBP10.88□□□□□ -0.67
PRKCH-209ENST00000553889 DHX16O60231 1041 aaKnown RBP10.88□□□□□ -0.67
PRKCH-209ENST00000553889 ZNF500O60304 480 aaPredicted RBP10.88□□□□□ -0.67
PRKCH-209ENST00000553889 IGSF3O75054 1194 aa10.88□□□□□ -0.67
PRKCH-209ENST00000553889 CTDNEP1O95476 244 aa10.88□□□□□ -0.67
PRKCH-209ENST00000553889 CAVIN2O95810 425 aa10.88□□□□□ -0.67
PRKCH-209ENST00000553889 FGAP02671 866 aa10.88□□□□□ -0.67
PRKCH-209ENST00000553889 CHGBP05060 677 aa10.88□□□□□ -0.67
PRKCH-209ENST00000553889 MCAMP43121 646 aa10.88□□□□□ -0.67
PRKCH-209ENST00000553889 SCRN1Q12765 414 aa10.88□□□□□ -0.67
PRKCH-209ENST00000553889 SCARF1Q14162 830 aa10.88□□□□□ -0.67
PRKCH-209ENST00000553889 TMED8Q6PL24 325 aaPredicted RBP10.88□□□□□ -0.67
PRKCH-209ENST00000553889 MARCH10Q8NA82 808 aaPredicted RBP10.88□□□□□ -0.67
PRKCH-209ENST00000553889 LEO1Q8WVC0 666 aaPredicted RBP10.88□□□□□ -0.67
PRKCH-209ENST00000553889 UTP14AQ9BVJ6 771 aaKnown RBP10.88□□□□□ -0.67
PRKCH-209ENST00000553889 CFAP45Q9UL16 551 aa10.88□□□□□ -0.67
PRKCH-209ENST00000553889 PHLPP1O60346 1717 aa10.87□□□□□ -0.67
PRKCH-209ENST00000553889 COL5A3P25940 1745 aaPredicted RBP10.87□□□□□ -0.67
PRKCH-209ENST00000553889 DOCK2Q92608 1830 aa10.87□□□□□ -0.67
PRKCH-209ENST00000553889 LOC102724428A0A0B4J2F2 783 aa10.87□□□□□ -0.67
PRKCH-209ENST00000553889 TCRBV5S4A2TA0A5A2 114 aa10.87□□□□□ -0.67
PRKCH-209ENST00000553889 FIBPO43427 364 aa10.87□□□□□ -0.67
PRKCH-209ENST00000553889 GPTP24298 496 aa10.87□□□□□ -0.67
PRKCH-209ENST00000553889 ADD1P35611 737 aaKnown RBP10.87□□□□□ -0.67
PRKCH-209ENST00000553889 CRKLP46109 303 aaKnown RBP10.87□□□□□ -0.67
PRKCH-209ENST00000553889 SIK1P57059 783 aa10.87□□□□□ -0.67
PRKCH-209ENST00000553889 FKBP4Q02790 459 aaKnown RBP eCLIP10.87□□□□□ -0.67
PRKCH-209ENST00000553889 CCDC102BQ68D86 513 aa10.87□□□□□ -0.67
PRKCH-209ENST00000553889 SYNE4Q8N205 404 aa10.87□□□□□ -0.67
PRKCH-209ENST00000553889 CNNM1Q9NRU3 951 aa10.87□□□□□ -0.67
PRKCH-209ENST00000553889 BCORQ6W2J9 1755 aa10.86□□□□□ -0.67
PRKCH-209ENST00000553889 GPAA1O43292 621 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms