RNA–Protein interactions for RNA: ENST00000553726.5

PRKCH-205, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-205ENST00000553726 TCP11L2Q8N4U5 519 aa9.96□□□□□ -0.82
PRKCH-205ENST00000553726 CFHR5Q9BXR6 569 aa9.96□□□□□ -0.82
PRKCH-205ENST00000553726 USP19O94966 1318 aa9.96□□□□□ -0.82
PRKCH-205ENST00000553726 PARD3Q8TEW0 1356 aa9.96□□□□□ -0.82
PRKCH-205ENST00000553726 LRP5O75197 1615 aa9.96□□□□□ -0.82
PRKCH-205ENST00000553726 TMEM229AB2RXF0 380 aa9.95□□□□□ -0.82
PRKCH-205ENST00000553726 FAM182BQ5T319 152 aa9.95□□□□□ -0.82
PRKCH-205ENST00000553726 SLC4A9Q96Q91 983 aa9.95□□□□□ -0.82
PRKCH-205ENST00000553726 USP35Q9P2H5 1018 aa9.95□□□□□ -0.82
PRKCH-205ENST00000553726 SERTAD1Q9UHV2 236 aa9.95□□□□□ -0.82
PRKCH-205ENST00000553726 NSFL1CQ9UNZ2 370 aaKnown RBP9.95□□□□□ -0.82
PRKCH-205ENST00000553726 NOD1Q9Y239 953 aa9.95□□□□□ -0.82
PRKCH-205ENST00000553726 EVC2Q86UK5 1308 aa9.95□□□□□ -0.82
PRKCH-205ENST00000553726 SSH2Q76I76 1423 aa9.95□□□□□ -0.82
PRKCH-205ENST00000553726 NRKQ7Z2Y5 1582 aa9.95□□□□□ -0.82
PRKCH-205ENST00000553726 QRICH2Q9H0J4 1663 aa9.95□□□□□ -0.82
PRKCH-205ENST00000553726 TNS1Q9HBL0 1735 aaKnown RBP9.94□□□□□ -0.82
PRKCH-205ENST00000553726 CAMTA1Q9Y6Y1 1673 aa9.94□□□□□ -0.82
PRKCH-205ENST00000553726 RNF225M0QZC1 329 aaPredicted RBP9.94□□□□□ -0.82
PRKCH-205ENST00000553726 TRIM37O94972 964 aa9.94□□□□□ -0.82
PRKCH-205ENST00000553726 APBA3O96018 575 aa9.94□□□□□ -0.82
PRKCH-205ENST00000553726 GSK3AP49840 483 aa9.94□□□□□ -0.82
PRKCH-205ENST00000553726 L3MBTL2Q969R5 705 aa9.94□□□□□ -0.82
PRKCH-205ENST00000553726 NIFKQ9BYG3 293 aaKnown RBP9.94□□□□□ -0.82
PRKCH-205ENST00000553726 RUBCNLQ9H714 662 aa9.94□□□□□ -0.82
PRKCH-205ENST00000553726 CABP1Q9NZU7 370 aa9.94□□□□□ -0.82
PRKCH-205ENST00000553726 PHF24Q9UPV7 400 aa9.94□□□□□ -0.82
PRKCH-205ENST00000553726 LMO7Q8WWI1 1683 aa9.93□□□□□ -0.82
PRKCH-205ENST00000553726 USP6P35125 1406 aa9.93□□□□□ -0.82
PRKCH-205ENST00000553726 POM121CA8CG34 1229 aa9.93□□□□□ -0.82
PRKCH-205ENST00000553726 PLA2G4AP47712 749 aa9.93□□□□□ -0.82
PRKCH-205ENST00000553726 MARSP56192 900 aaKnown RBP9.93□□□□□ -0.82
PRKCH-205ENST00000553726 NCOA4Q13772 614 aa9.93□□□□□ -0.82
PRKCH-205ENST00000553726 UBAP2LQ14157 1087 aaKnown RBP9.93□□□□□ -0.82
PRKCH-205ENST00000553726 EFHC2Q5JST6 749 aa9.93□□□□□ -0.82
PRKCH-205ENST00000553726 LARP1Q6PKG0 1096 aaKnown RBP9.93□□□□□ -0.82
PRKCH-205ENST00000553726 TBC1D9Q6ZT07 1266 aa9.93□□□□□ -0.82
PRKCH-205ENST00000553726 CAMKK2Q96RR4 588 aa9.93□□□□□ -0.82
PRKCH-205ENST00000553726 ENAMQ9NRM1 1142 aa9.93□□□□□ -0.82
PRKCH-205ENST00000553726 AATKQ6ZMQ8 1374 aa9.92□□□□□ -0.82
PRKCH-205ENST00000553726 A6NJY4 79 aa9.92□□□□□ -0.82
PRKCH-205ENST00000553726 CDK2AP1O14519 115 aa9.92□□□□□ -0.82
PRKCH-205ENST00000553726 GTF2IP78347 998 aa9.92□□□□□ -0.82
PRKCH-205ENST00000553726 MTFR1Q15390 333 aa9.92□□□□□ -0.82
PRKCH-205ENST00000553726 EZH2Q15910 746 aaKnown RBP9.92□□□□□ -0.82
PRKCH-205ENST00000553726 KCNH5Q8NCM2 988 aa9.92□□□□□ -0.82
PRKCH-205ENST00000553726 CRISPLD1Q9H336 500 aa9.92□□□□□ -0.82
PRKCH-205ENST00000553726 CRB1P82279 1406 aa9.91□□□□□ -0.82
PRKCH-205ENST00000553726 PARP4Q9UKK3 1724 aaKnown RBP9.91□□□□□ -0.82
PRKCH-205ENST00000553726 USP17L5A8MUK1 530 aa9.91□□□□□ -0.82
PRKCH-205ENST00000553726 BCRP11274 1271 aa9.91□□□□□ -0.82
PRKCH-205ENST00000553726 RASSF7Q02833 373 aa9.91□□□□□ -0.82
PRKCH-205ENST00000553726 R3HDM1Q15032 1099 aaKnown RBP9.91□□□□□ -0.82
PRKCH-205ENST00000553726 HDGFL1Q5TGJ6 251 aa9.91□□□□□ -0.82
PRKCH-205ENST00000553726 C1orf216Q8TAB5 229 aa9.91□□□□□ -0.82
PRKCH-205ENST00000553726 ADAMTS19Q8TE59 1207 aa9.91□□□□□ -0.82
PRKCH-205ENST00000553726 ACDQ96AP0 544 aa9.91□□□□□ -0.82
PRKCH-205ENST00000553726 IQSEC3Q9UPP2 1182 aaPredicted RBP9.91□□□□□ -0.82
PRKCH-205ENST00000553726 TRPM1Q7Z4N2 1603 aa9.91□□□□□ -0.82
PRKCH-205ENST00000553726 COL5A2P05997 1499 aaPredicted RBP9.91□□□□□ -0.82
PRKCH-205ENST00000553726 TTC21AQ8NDW8 1320 aa9.9□□□□□ -0.82
PRKCH-205ENST00000553726 BACH1O14867 736 aa9.9□□□□□ -0.82
PRKCH-205ENST00000553726 MAP2K3P46734 347 aa9.9□□□□□ -0.82
PRKCH-205ENST00000553726 DEPDC4Q8N2C3 294 aa9.9□□□□□ -0.82
PRKCH-205ENST00000553726 SLIT3O75094 1523 aa9.9□□□□□ -0.82
PRKCH-205ENST00000553726 ROCK2O75116 1388 aaKnown RBP9.89□□□□□ -0.83
PRKCH-205ENST00000553726 NEUROD1Q13562 356 aa9.89□□□□□ -0.83
PRKCH-205ENST00000553726 DDB1Q16531 1140 aa9.89□□□□□ -0.83
PRKCH-205ENST00000553726 TOM1L2Q6ZVM7 507 aa9.89□□□□□ -0.83
PRKCH-205ENST00000553726 ZNF295-AS1Q8N0V1 137 aa9.89□□□□□ -0.83
PRKCH-205ENST00000553726 TMEM151AQ8N4L1 468 aa9.89□□□□□ -0.83
PRKCH-205ENST00000553726 AIDAQ96BJ3 306 aa9.89□□□□□ -0.83
PRKCH-205ENST00000553726 SCARF2Q96GP6 870 aaPredicted RBP9.89□□□□□ -0.83
PRKCH-205ENST00000553726 SIN3AQ96ST3 1273 aa9.89□□□□□ -0.83
PRKCH-205ENST00000553726 LRRC4BQ9NT99 713 aa9.89□□□□□ -0.83
PRKCH-205ENST00000553726 ATXN7L1Q9ULK2 861 aaPredicted RBP9.89□□□□□ -0.83
PRKCH-205ENST00000553726 TTC21BQ7Z4L5 1316 aa9.88□□□□□ -0.83
PRKCH-205ENST00000553726 WDR17Q8IZU2 1322 aa9.88□□□□□ -0.83
PRKCH-205ENST00000553726 ZBTB7CA1YPR0 619 aa9.88□□□□□ -0.83
PRKCH-205ENST00000553726 PLSCR1O15162 318 aa9.88□□□□□ -0.83
PRKCH-205ENST00000553726 ATP4AP20648 1035 aa9.88□□□□□ -0.83
PRKCH-205ENST00000553726 OVOS2A0A0G2JMS6 1433 aa9.88□□□□□ -0.83
PRKCH-205ENST00000553726 OVOS2A0A0J9YW53 1432 aa9.88□□□□□ -0.83
PRKCH-205ENST00000553726 OVOS2Q6IE36 1432 aa9.88□□□□□ -0.83
PRKCH-205ENST00000553726 AKAP12Q02952 1782 aa9.88□□□□□ -0.83
PRKCH-205ENST00000553726 RREB1Q92766 1687 aa9.87□□□□□ -0.83
PRKCH-205ENST00000553726 GDF11O95390 407 aa9.87□□□□□ -0.83
PRKCH-205ENST00000553726 ARHGEF25Q86VW2 580 aa9.87□□□□□ -0.83
PRKCH-205ENST00000553726 TRIM50Q86XT4 487 aa9.87□□□□□ -0.83
PRKCH-205ENST00000553726 PLEKHM2Q8IWE5 1019 aa9.87□□□□□ -0.83
PRKCH-205ENST00000553726 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.87□□□□□ -0.83
PRKCH-205ENST00000553726 NDFIP2Q9NV92 336 aa9.87□□□□□ -0.83
PRKCH-205ENST00000553726 ZNF358Q9NW07 568 aa9.87□□□□□ -0.83
PRKCH-205ENST00000553726 USP3Q9Y6I4 520 aa9.87□□□□□ -0.83
PRKCH-205ENST00000553726 COL18A1P39060 1754 aa9.87□□□□□ -0.83
PRKCH-205ENST00000553726 SBNO2Q9Y2G9 1366 aa9.87□□□□□ -0.83
PRKCH-205ENST00000553726 PIK3C2AO00443 1686 aa9.87□□□□□ -0.83
PRKCH-205ENST00000553726 BNIP3LO60238 219 aa9.86□□□□□ -0.83
PRKCH-205ENST00000553726 IRS1P35568 1242 aa9.86□□□□□ -0.83
PRKCH-205ENST00000553726 CPSF1Q10570 1443 aaKnown RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms