RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 CLP1Q92989 425 aaKnown RBP9.38□□□□□ -0.91
ATXN3-223ENST00000553686 BCS1LQ9Y276 419 aa9.38□□□□□ -0.91
ATXN3-223ENST00000553686 NKTRP30414 1462 aaKnown RBP9.38□□□□□ -0.91
ATXN3-223ENST00000553686 ERVK-7P63135 1459 aa9.38□□□□□ -0.91
ATXN3-223ENST00000553686 PHLPP1O60346 1717 aa9.37□□□□□ -0.91
ATXN3-223ENST00000553686 ARHGAP35Q9NRY4 1499 aa9.37□□□□□ -0.91
ATXN3-223ENST00000553686 NEURL1BA8MQ27 555 aa9.37□□□□□ -0.91
ATXN3-223ENST00000553686 DGKZQ13574 1117 aa9.37□□□□□ -0.91
ATXN3-223ENST00000553686 C11orf91Q3C1V1 193 aa9.37□□□□□ -0.91
ATXN3-223ENST00000553686 EDARADDQ8WWZ3 215 aa9.37□□□□□ -0.91
ATXN3-223ENST00000553686 ARID3AQ99856 593 aa9.37□□□□□ -0.91
ATXN3-223ENST00000553686 KCNH4Q9UQ05 1017 aa9.37□□□□□ -0.91
ATXN3-223ENST00000553686 CASKIN1Q8WXD9 1431 aa9.37□□□□□ -0.91
ATXN3-223ENST00000553686 MBD5Q9P267 1494 aa9.36□□□□□ -0.91
ATXN3-223ENST00000553686 PCBP4P57723 403 aaKnown RBP9.36□□□□□ -0.91
ATXN3-223ENST00000553686 TYRO3Q06418 890 aa9.36□□□□□ -0.91
ATXN3-223ENST00000553686 CXXC1Q9P0U4 656 aaPredicted RBP9.36□□□□□ -0.91
ATXN3-223ENST00000553686 KLF15Q9UIH9 416 aa9.36□□□□□ -0.91
ATXN3-223ENST00000553686 COL16A1Q07092 1604 aaPredicted RBP9.35□□□□□ -0.91
ATXN3-223ENST00000553686 TGFBR3LH3BV60 316 aa9.35□□□□□ -0.91
ATXN3-223ENST00000553686 ADH6P28332 368 aa9.35□□□□□ -0.91
ATXN3-223ENST00000553686 IER5Q5VY09 327 aa9.35□□□□□ -0.91
ATXN3-223ENST00000553686 MYO19Q96H55 970 aa9.35□□□□□ -0.91
ATXN3-223ENST00000553686 SLC30A3Q99726 388 aa9.35□□□□□ -0.91
ATXN3-223ENST00000553686 AVENQ9NQS1 362 aaPredicted RBP9.35□□□□□ -0.91
ATXN3-223ENST00000553686 DMGDHQ9UI17 866 aaKnown RBP9.35□□□□□ -0.91
ATXN3-223ENST00000553686 LRFN2Q9ULH4 789 aa9.35□□□□□ -0.91
ATXN3-223ENST00000553686 ZC3H13Q5T200 1668 aaKnown RBP9.35□□□□□ -0.91
ATXN3-223ENST00000553686 SETD5Q9C0A6 1442 aa9.34□□□□□ -0.91
ATXN3-223ENST00000553686 SHISA8B8ZZ34 492 aa9.34□□□□□ -0.91
ATXN3-223ENST00000553686 KCNQ4P56696 695 aa9.34□□□□□ -0.91
ATXN3-223ENST00000553686 IDI1Q13907 227 aa9.34□□□□□ -0.91
ATXN3-223ENST00000553686 COX20Q5RI15 118 aa9.34□□□□□ -0.91
ATXN3-223ENST00000553686 ZNF468Q5VIY5 522 aaPredicted RBP9.34□□□□□ -0.91
ATXN3-223ENST00000553686 CAPN12Q6ZSI9 719 aa9.34□□□□□ -0.91
ATXN3-223ENST00000553686 MKNK1Q9BUB5 465 aa9.34□□□□□ -0.91
ATXN3-223ENST00000553686 TBX22Q9Y458 520 aa9.34□□□□□ -0.91
ATXN3-223ENST00000553686 ADGBQ8N7X0 1667 aa9.34□□□□□ -0.91
ATXN3-223ENST00000553686 BLMP54132 1417 aaPredicted RBP9.33□□□□□ -0.92
ATXN3-223ENST00000553686 ATP2B4P23634 1241 aa9.33□□□□□ -0.92
ATXN3-223ENST00000553686 SPEM2Q0P670 501 aa9.33□□□□□ -0.92
ATXN3-223ENST00000553686 NAA30Q147X3 362 aaPredicted RBP9.33□□□□□ -0.92
ATXN3-223ENST00000553686 SLCO4C1Q6ZQN7 724 aa9.33□□□□□ -0.92
ATXN3-223ENST00000553686 DEFB132Q7Z7B7 95 aa9.33□□□□□ -0.92
ATXN3-223ENST00000553686 SYT9Q86SS6 491 aa9.33□□□□□ -0.92
ATXN3-223ENST00000553686 IFT43Q96FT9 208 aa9.33□□□□□ -0.92
ATXN3-223ENST00000553686 MTUS2Q5JR59 1369 aa9.33□□□□□ -0.92
ATXN3-223ENST00000553686 MICAL2O94851 1124 aa9.32□□□□□ -0.92
ATXN3-223ENST00000553686 EPXP11678 715 aa9.32□□□□□ -0.92
ATXN3-223ENST00000553686 COL26A1Q96A83 441 aa9.32□□□□□ -0.92
ATXN3-223ENST00000553686 SCARF2Q96GP6 870 aaPredicted RBP9.32□□□□□ -0.92
ATXN3-223ENST00000553686 BTBD6Q96KE9 485 aa9.32□□□□□ -0.92
ATXN3-223ENST00000553686 SAP130Q9H0E3 1048 aa9.32□□□□□ -0.92
ATXN3-223ENST00000553686 TIAM1Q13009 1591 aa9.32□□□□□ -0.92
ATXN3-223ENST00000553686 AHDC1Q5TGY3 1603 aaPredicted RBP9.31□□□□□ -0.92
ATXN3-223ENST00000553686 PTCD1O75127 700 aaKnown RBP9.31□□□□□ -0.92
ATXN3-223ENST00000553686 AMPD1P23109 780 aa9.31□□□□□ -0.92
ATXN3-223ENST00000553686 IDH3AP50213 366 aa9.31□□□□□ -0.92
ATXN3-223ENST00000553686 NEUROD1Q13562 356 aa9.31□□□□□ -0.92
ATXN3-223ENST00000553686 C16orf46Q6P387 395 aa9.31□□□□□ -0.92
ATXN3-223ENST00000553686 FCHSD1Q86WN1 690 aa9.31□□□□□ -0.92
ATXN3-223ENST00000553686 BEND7Q8N7W2 519 aaPredicted RBP9.31□□□□□ -0.92
ATXN3-223ENST00000553686 NWD1Q149M9 1564 aa9.31□□□□□ -0.92
ATXN3-223ENST00000553686 ARHGAP31Q2M1Z3 1444 aa9.31□□□□□ -0.92
ATXN3-223ENST00000553686 CNTNAP5Q8WYK1 1306 aa9.31□□□□□ -0.92
ATXN3-223ENST00000553686 INPP5BP32019 993 aa9.3□□□□□ -0.92
ATXN3-223ENST00000553686 RAB44Q7Z6P3 723 aaPredicted RBP9.3□□□□□ -0.92
ATXN3-223ENST00000553686 RRAGCQ9HB90 399 aa9.3□□□□□ -0.92
ATXN3-223ENST00000553686 SLC52A1Q9NWF4 448 aa9.3□□□□□ -0.92
ATXN3-223ENST00000553686 XIRP1Q702N8 1843 aaKnown RBP9.3□□□□□ -0.92
ATXN3-223ENST00000553686 CCDC141Q6ZP82 1450 aa9.29□□□□□ -0.92
ATXN3-223ENST00000553686 PNPLA6Q8IY17 1366 aa9.29□□□□□ -0.92
ATXN3-223ENST00000553686 TMEM88BA6NKF7 163 aa9.29□□□□□ -0.92
ATXN3-223ENST00000553686 OPLAHO14841 1288 aa9.29□□□□□ -0.92
ATXN3-223ENST00000553686 SIN3BO75182 1162 aa9.29□□□□□ -0.92
ATXN3-223ENST00000553686 BAG6P46379 1132 aa9.29□□□□□ -0.92
ATXN3-223ENST00000553686 KCNMA1Q12791 1236 aa9.29□□□□□ -0.92
ATXN3-223ENST00000553686 CDC42BPAQ5VT25 1732 aa9.28□□□□□ -0.92
ATXN3-223ENST00000553686 EPB42P16452 691 aa9.28□□□□□ -0.92
ATXN3-223ENST00000553686 BRD2P25440 801 aaKnown RBP9.28□□□□□ -0.92
ATXN3-223ENST00000553686 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.28□□□□□ -0.92
ATXN3-223ENST00000553686 BHMTQ93088 406 aa9.28□□□□□ -0.92
ATXN3-223ENST00000553686 GSX2Q9BZM3 304 aa9.28□□□□□ -0.92
ATXN3-223ENST00000553686 TET3O43151 1660 aa9.28□□□□□ -0.92
ATXN3-223ENST00000553686 SHPRHQ149N8 1683 aa9.28□□□□□ -0.92
ATXN3-223ENST00000553686 CARNS1A5YM72 827 aa9.27□□□□□ -0.93
ATXN3-223ENST00000553686 RNF225M0QZC1 329 aaPredicted RBP9.27□□□□□ -0.93
ATXN3-223ENST00000553686 ALAS2P22557 587 aa9.27□□□□□ -0.93
ATXN3-223ENST00000553686 IRS1P35568 1242 aa9.27□□□□□ -0.93
ATXN3-223ENST00000553686 ARSDP51689 593 aa9.27□□□□□ -0.93
ATXN3-223ENST00000553686 SNRPNP63162 240 aaKnown RBP9.27□□□□□ -0.93
ATXN3-223ENST00000553686 PODNQ7Z5L7 613 aa9.27□□□□□ -0.93
ATXN3-223ENST00000553686 TREML1Q86YW5 311 aa9.27□□□□□ -0.93
ATXN3-223ENST00000553686 ATRNO75882 1429 aa9.27□□□□□ -0.93
ATXN3-223ENST00000553686 PLEKHG1Q9ULL1 1385 aa9.26□□□□□ -0.93
ATXN3-223ENST00000553686 CCINQ13939 588 aa9.26□□□□□ -0.93
ATXN3-223ENST00000553686 SEPT3Q9UH03 358 aa9.26□□□□□ -0.93
ATXN3-223ENST00000553686 AMOTL2Q9Y2J4 779 aa9.26□□□□□ -0.93
ATXN3-223ENST00000553686 CAMSAP2Q08AD1 1489 aa9.26□□□□□ -0.93
ATXN3-223ENST00000553686 EFCAB6Q5THR3 1501 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms