RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 PALLDQ8WX93 1383 aa7.93□□□□□ -1.14
SMARCE1P3-201ENST00000553649 BRCA1P38398 1863 aaKnown RBP7.92□□□□□ -1.14
SMARCE1P3-201ENST00000553649 XP32Q5T750 250 aa7.92□□□□□ -1.14
SMARCE1P3-201ENST00000553649 LMNB1P20700 586 aa7.91□□□□□ -1.14
SMARCE1P3-201ENST00000553649 ITGA6P23229 1130 aa7.91□□□□□ -1.14
SMARCE1P3-201ENST00000553649 CSPP1Q1MSJ5 1256 aa7.91□□□□□ -1.14
SMARCE1P3-201ENST00000553649 DEFB115Q30KQ5 88 aa7.91□□□□□ -1.14
SMARCE1P3-201ENST00000553649 PPP1R26Q5T8A7 1209 aaPredicted RBP7.91□□□□□ -1.14
SMARCE1P3-201ENST00000553649 RIC3Q7Z5B4 369 aa7.91□□□□□ -1.14
SMARCE1P3-201ENST00000553649 ANKRD24Q8TF21 1146 aa7.91□□□□□ -1.14
SMARCE1P3-201ENST00000553649 GCC1Q96CN9 775 aa7.91□□□□□ -1.14
SMARCE1P3-201ENST00000553649 CCDC87Q9NVE4 849 aa7.91□□□□□ -1.14
SMARCE1P3-201ENST00000553649 ARFGEF1Q9Y6D6 1849 aa7.91□□□□□ -1.14
SMARCE1P3-201ENST00000553649 THSD7BQ9C0I4 1608 aa7.9□□□□□ -1.14
SMARCE1P3-201ENST00000553649 KTN1Q86UP2 1357 aaKnown RBP7.9□□□□□ -1.14
SMARCE1P3-201ENST00000553649 IGHA1P01876 353 aa7.9□□□□□ -1.14
SMARCE1P3-201ENST00000553649 DGKZQ13574 1117 aa7.9□□□□□ -1.14
SMARCE1P3-201ENST00000553649 QPCTQ16769 361 aa7.9□□□□□ -1.14
SMARCE1P3-201ENST00000553649 LYPD4Q6UWN0 246 aa7.9□□□□□ -1.14
SMARCE1P3-201ENST00000553649 TMC1Q8TDI8 760 aa7.9□□□□□ -1.14
SMARCE1P3-201ENST00000553649 L3MBTL2Q969R5 705 aa7.9□□□□□ -1.14
SMARCE1P3-201ENST00000553649 UBR3Q6ZT12 1888 aa7.89□□□□□ -1.15
SMARCE1P3-201ENST00000553649 TAF1LQ8IZX4 1826 aa7.89□□□□□ -1.15
SMARCE1P3-201ENST00000553649 LTBP1Q14766 1721 aa7.89□□□□□ -1.15
SMARCE1P3-201ENST00000553649 FAM208AQ9UK61 1670 aaKnown RBP7.89□□□□□ -1.15
SMARCE1P3-201ENST00000553649 MEGF6O75095 1541 aa7.89□□□□□ -1.15
SMARCE1P3-201ENST00000553649 MAGEB6P1A0A0J9YX57 407 aa7.89□□□□□ -1.15
SMARCE1P3-201ENST00000553649 CHRNA5P30532 468 aa7.89□□□□□ -1.15
SMARCE1P3-201ENST00000553649 CTSOP43234 321 aaPredicted RBP7.89□□□□□ -1.15
SMARCE1P3-201ENST00000553649 FXR1P51114 621 aaKnown RBP eCLIP7.89□□□□□ -1.15
SMARCE1P3-201ENST00000553649 NEUROD1Q13562 356 aa7.89□□□□□ -1.15
SMARCE1P3-201ENST00000553649 NME9Q86XW9 330 aa7.89□□□□□ -1.15
SMARCE1P3-201ENST00000553649 LINC00116Q8NCU8 138 aa7.89□□□□□ -1.15
SMARCE1P3-201ENST00000553649 LTV1Q96GA3 475 aaPredicted RBP7.89□□□□□ -1.15
SMARCE1P3-201ENST00000553649 ROCK2O75116 1388 aaKnown RBP7.88□□□□□ -1.15
SMARCE1P3-201ENST00000553649 CDC14CA4D256 554 aa7.88□□□□□ -1.15
SMARCE1P3-201ENST00000553649 ITGB2P05107 769 aa7.88□□□□□ -1.15
SMARCE1P3-201ENST00000553649 MARSP56192 900 aaKnown RBP7.88□□□□□ -1.15
SMARCE1P3-201ENST00000553649 ERFEQ4G0M1 354 aa7.88□□□□□ -1.15
SMARCE1P3-201ENST00000553649 KANK3Q6NY19 840 aa7.88□□□□□ -1.15
SMARCE1P3-201ENST00000553649 ERICH6Q7L0X2 663 aa7.88□□□□□ -1.15
SMARCE1P3-201ENST00000553649 PARP9Q8IXQ6 854 aa7.88□□□□□ -1.15
SMARCE1P3-201ENST00000553649 NLGN1Q8N2Q7 840 aa7.88□□□□□ -1.15
SMARCE1P3-201ENST00000553649 ZCRB1Q8TBF4 217 aaKnown RBP7.88□□□□□ -1.15
SMARCE1P3-201ENST00000553649 AGBL1Q96MI9 1066 aa7.88□□□□□ -1.15
SMARCE1P3-201ENST00000553649 LIMD1Q9UGP4 676 aa7.88□□□□□ -1.15
SMARCE1P3-201ENST00000553649 C4AP0C0L4 1744 aa7.87□□□□□ -1.15
SMARCE1P3-201ENST00000553649 NFKBIEO00221 500 aa7.87□□□□□ -1.15
SMARCE1P3-201ENST00000553649 SV2AQ7L0J3 742 aa7.87□□□□□ -1.15
SMARCE1P3-201ENST00000553649 LDHDQ86WU2 507 aa7.87□□□□□ -1.15
SMARCE1P3-201ENST00000553649 TSC1Q92574 1164 aa7.87□□□□□ -1.15
SMARCE1P3-201ENST00000553649 SIN3AQ96ST3 1273 aa7.87□□□□□ -1.15
SMARCE1P3-201ENST00000553649 CARD14Q9BXL6 1004 aa7.87□□□□□ -1.15
SMARCE1P3-201ENST00000553649 SBF1O95248 1867 aa7.87□□□□□ -1.15
SMARCE1P3-201ENST00000553649 SBNO2Q9Y2G9 1366 aa7.86□□□□□ -1.15
SMARCE1P3-201ENST00000553649 CGNL1Q0VF96 1302 aa7.86□□□□□ -1.15
SMARCE1P3-201ENST00000553649 GYS1P13807 737 aa7.86□□□□□ -1.15
SMARCE1P3-201ENST00000553649 TMF1P82094 1093 aa7.86□□□□□ -1.15
SMARCE1P3-201ENST00000553649 DIXDC1Q155Q3 683 aa7.86□□□□□ -1.15
SMARCE1P3-201ENST00000553649 ARMC2Q8NEN0 867 aa7.86□□□□□ -1.15
SMARCE1P3-201ENST00000553649 IP6K1Q92551 441 aa7.86□□□□□ -1.15
SMARCE1P3-201ENST00000553649 CAPNS2Q96L46 248 aa7.86□□□□□ -1.15
SMARCE1P3-201ENST00000553649 INSM2Q96T92 566 aaPredicted RBP7.86□□□□□ -1.15
SMARCE1P3-201ENST00000553649 TIAM2Q8IVF5 1701 aa7.86□□□□□ -1.15
SMARCE1P3-201ENST00000553649 MAP2P11137 1827 aaKnown RBP7.85□□□□□ -1.15
SMARCE1P3-201ENST00000553649 LILRB3O75022 631 aa7.85□□□□□ -1.15
SMARCE1P3-201ENST00000553649 DDNO94850 711 aaPredicted RBP7.85□□□□□ -1.15
SMARCE1P3-201ENST00000553649 FOXK2Q01167 660 aa7.85□□□□□ -1.15
SMARCE1P3-201ENST00000553649 ITPK1Q13572 414 aa7.85□□□□□ -1.15
SMARCE1P3-201ENST00000553649 GAS6Q14393 721 aa7.85□□□□□ -1.15
SMARCE1P3-201ENST00000553649 HDGFL2Q7Z4V5 671 aaPredicted RBP7.85□□□□□ -1.15
SMARCE1P3-201ENST00000553649 GPR101Q96P66 508 aaPredicted RBP7.85□□□□□ -1.15
SMARCE1P3-201ENST00000553649 CUEDC1Q9NWM3 386 aaPredicted RBP7.85□□□□□ -1.15
SMARCE1P3-201ENST00000553649 PARP3Q9Y6F1 533 aa7.85□□□□□ -1.15
SMARCE1P3-201ENST00000553649 MON2Q7Z3U7 1717 aa7.85□□□□□ -1.15
SMARCE1P3-201ENST00000553649 CD163L1Q9NR16 1453 aa7.85□□□□□ -1.15
SMARCE1P3-201ENST00000553649 LTN1O94822 1766 aa7.84□□□□□ -1.15
SMARCE1P3-201ENST00000553649 PITPNM2Q9BZ72 1349 aa7.84□□□□□ -1.15
SMARCE1P3-201ENST00000553649 CELA2BP08218 269 aaPredicted RBP7.84□□□□□ -1.15
SMARCE1P3-201ENST00000553649 DDR1Q08345 913 aa7.84□□□□□ -1.15
SMARCE1P3-201ENST00000553649 RTL5Q5HYW3 569 aaPredicted RBP7.84□□□□□ -1.15
SMARCE1P3-201ENST00000553649 CYP4F22Q6NT55 531 aa7.84□□□□□ -1.15
SMARCE1P3-201ENST00000553649 MPRIPQ6WCQ1 1025 aa7.84□□□□□ -1.15
SMARCE1P3-201ENST00000553649 NBPF15Q8N660 670 aa7.84□□□□□ -1.15
SMARCE1P3-201ENST00000553649 SMARCC1Q92922 1105 aaPredicted RBP7.84□□□□□ -1.15
SMARCE1P3-201ENST00000553649 SCARF2Q96GP6 870 aaPredicted RBP7.84□□□□□ -1.15
SMARCE1P3-201ENST00000553649 SLC12A5Q9H2X9 1139 aa7.84□□□□□ -1.15
SMARCE1P3-201ENST00000553649 TAF1DQ9H5J8 278 aaPredicted RBP7.84□□□□□ -1.15
SMARCE1P3-201ENST00000553649 ABT1Q9ULW3 272 aaKnown RBP7.84□□□□□ -1.15
SMARCE1P3-201ENST00000553649 LOC102724428A0A0B4J2F2 783 aa7.83□□□□□ -1.16
SMARCE1P3-201ENST00000553649 ADAM23O75077 832 aa7.83□□□□□ -1.16
SMARCE1P3-201ENST00000553649 AOC2O75106 756 aa7.83□□□□□ -1.16
SMARCE1P3-201ENST00000553649 FBLN1P23142 703 aa7.83□□□□□ -1.16
SMARCE1P3-201ENST00000553649 SIK1P57059 783 aa7.83□□□□□ -1.16
SMARCE1P3-201ENST00000553649 RELBQ01201 579 aa7.83□□□□□ -1.16
SMARCE1P3-201ENST00000553649 PLA2G4EQ3MJ16 856 aa7.83□□□□□ -1.16
SMARCE1P3-201ENST00000553649 MYSM1Q5VVJ2 828 aa7.83□□□□□ -1.16
SMARCE1P3-201ENST00000553649 RNF217Q8TC41 542 aa7.83□□□□□ -1.16
SMARCE1P3-201ENST00000553649 PGPEP1Q9NXJ5 209 aa7.83□□□□□ -1.16
SMARCE1P3-201ENST00000553649 ADAMTS7Q9UKP4 1686 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms