RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 ZBTB48P10074 688 aaPredicted RBP18.08■□□□□ 0.48
PRPF39-204ENST00000553605 ZNF333Q96JL9 665 aa18.08■□□□□ 0.48
PRPF39-204ENST00000553605 MXD3Q9BW11 206 aa18.08■□□□□ 0.48
PRPF39-204ENST00000553605 FZD1Q9UP38 647 aa18.08■□□□□ 0.48
PRPF39-204ENST00000553605 XDHP47989 1333 aa18.07■□□□□ 0.48
PRPF39-204ENST00000553605 SASH1O94885 1247 aa18.07■□□□□ 0.48
PRPF39-204ENST00000553605 ATP2B4P23634 1241 aa18.07■□□□□ 0.48
PRPF39-204ENST00000553605 SP3Q02447 781 aa18.07■□□□□ 0.48
PRPF39-204ENST00000553605 CRHR2Q13324 411 aa18.07■□□□□ 0.48
PRPF39-204ENST00000553605 DACT2Q5SW24 774 aa18.07■□□□□ 0.48
PRPF39-204ENST00000553605 OTUD7BQ6GQQ9 843 aa18.07■□□□□ 0.48
PRPF39-204ENST00000553605 NBPF11Q86T75 865 aa18.07■□□□□ 0.48
PRPF39-204ENST00000553605 APOBEC3FQ8IUX4 373 aaKnown RBP18.07■□□□□ 0.48
PRPF39-204ENST00000553605 TRIM28Q13263 835 aaKnown RBP18.06■□□□□ 0.48
PRPF39-204ENST00000553605 SLC4A8Q2Y0W8 1093 aa18.06■□□□□ 0.48
PRPF39-204ENST00000553605 CHRDL2Q6WN34 429 aa18.06■□□□□ 0.48
PRPF39-204ENST00000553605 WNK4Q96J92 1243 aa18.06■□□□□ 0.48
PRPF39-204ENST00000553605 CHPF2Q9P2E5 772 aa18.06■□□□□ 0.48
PRPF39-204ENST00000553605 TRIOBPQ9H2D6 2365 aa18.06■□□□□ 0.48
PRPF39-204ENST00000553605 MYO3BQ8WXR4 1341 aa18.05■□□□□ 0.48
PRPF39-204ENST00000553605 MAPK8IP3Q9UPT6 1336 aa18.05■□□□□ 0.48
PRPF39-204ENST00000553605 MMP14P50281 582 aa18.05■□□□□ 0.48
PRPF39-204ENST00000553605 FBXW7Q969H0 707 aa18.05■□□□□ 0.48
PRPF39-204ENST00000553605 PNNQ9H307 717 aaKnown RBP18.05■□□□□ 0.48
PRPF39-204ENST00000553605 HSP90B1P14625 803 aaKnown RBP18.04■□□□□ 0.48
PRPF39-204ENST00000553605 CAP1Q01518 475 aa18.04■□□□□ 0.48
PRPF39-204ENST00000553605 MAP3K11Q16584 847 aa18.04■□□□□ 0.48
PRPF39-204ENST00000553605 SLC9C1Q4G0N8 1177 aa18.04■□□□□ 0.48
PRPF39-204ENST00000553605 CCDC152Q4G0S7 254 aa18.04■□□□□ 0.48
PRPF39-204ENST00000553605 STRIP1Q5VSL9 837 aa18.04■□□□□ 0.48
PRPF39-204ENST00000553605 ZBTB38Q8NAP3 1195 aaPredicted RBP18.04■□□□□ 0.48
PRPF39-204ENST00000553605 CLMNQ96JQ2 1002 aa18.04■□□□□ 0.48
PRPF39-204ENST00000553605 PPP1R12BO60237 982 aaPredicted RBP18.03■□□□□ 0.48
PRPF39-204ENST00000553605 RBM27Q9P2N5 1060 aaKnown RBP18.03■□□□□ 0.48
PRPF39-204ENST00000553605 WTIPA6NIX2 430 aaPredicted RBP18.02■□□□□ 0.48
PRPF39-204ENST00000553605 RIPK4P57078 832 aa18.02■□□□□ 0.48
PRPF39-204ENST00000553605 ARHGEF6Q15052 776 aa18.02■□□□□ 0.48
PRPF39-204ENST00000553605 KRT24Q2M2I5 525 aa18.02■□□□□ 0.48
PRPF39-204ENST00000553605 ANKRD18AQ8IVF6 992 aa18.02■□□□□ 0.48
PRPF39-204ENST00000553605 CCDC85AQ96PX6 553 aaPredicted RBP18.02■□□□□ 0.48
PRPF39-204ENST00000553605 DEFB129Q9H1M3 183 aa18.02■□□□□ 0.48
PRPF39-204ENST00000553605 CEP290O15078 2479 aa18.01■□□□□ 0.47
PRPF39-204ENST00000553605 UNCXA6NJT0 531 aa18.01■□□□□ 0.47
PRPF39-204ENST00000553605 MYCP01106 439 aaPredicted RBP18.01■□□□□ 0.47
PRPF39-204ENST00000553605 PTPN18Q99952 460 aa18.01■□□□□ 0.47
PRPF39-204ENST00000553605 PTCH2Q9Y6C5 1203 aa18.01■□□□□ 0.47
PRPF39-204ENST00000553605 MED23Q9ULK4 1368 aa18.01■□□□□ 0.47
PRPF39-204ENST00000553605 A0A0C4DFX4 3053 aa18■□□□□ 0.47
PRPF39-204ENST00000553605 HDGFL1Q5TGJ6 251 aa18■□□□□ 0.47
PRPF39-204ENST00000553605 KIAA0825Q8IV33 1275 aa18■□□□□ 0.47
PRPF39-204ENST00000553605 ZBED3Q96IU2 234 aaPredicted RBP18■□□□□ 0.47
PRPF39-204ENST00000553605 DBF4Q9UBU7 674 aaPredicted RBP18■□□□□ 0.47
PRPF39-204ENST00000553605 TESPA1A2RU30 521 aaPredicted RBP17.99■□□□□ 0.47
PRPF39-204ENST00000553605 PDE8AO60658 829 aa17.99■□□□□ 0.47
PRPF39-204ENST00000553605 GJA5P36382 358 aa17.99■□□□□ 0.47
PRPF39-204ENST00000553605 TTLL5Q6EMB2 1281 aa17.99■□□□□ 0.47
PRPF39-204ENST00000553605 DPF3Q92784 378 aa17.99■□□□□ 0.47
PRPF39-204ENST00000553605 COA1Q9GZY4 146 aa17.99■□□□□ 0.47
PRPF39-204ENST00000553605 COL1A1P02452 1464 aaPredicted RBP17.99■□□□□ 0.47
PRPF39-204ENST00000553605 RANBP2P49792 3224 aaKnown RBP17.98■□□□□ 0.47
PRPF39-204ENST00000553605 HYPKQ9NX55 129 aa17.98■□□□□ 0.47
PRPF39-204ENST00000553605 LAMB1P07942 1786 aa17.97■□□□□ 0.47
PRPF39-204ENST00000553605 COL6A3P12111 3177 aa17.97■□□□□ 0.47
PRPF39-204ENST00000553605 SUPT20HL1Q3ZLR7 823 aa17.97■□□□□ 0.47
PRPF39-204ENST00000553605 RIC3Q7Z5B4 369 aa17.97■□□□□ 0.47
PRPF39-204ENST00000553605 MINPP1Q9UNW1 487 aa17.97■□□□□ 0.47
PRPF39-204ENST00000553605 PPP2R3BQ9Y5P8 575 aa17.97■□□□□ 0.47
PRPF39-204ENST00000553605 SSC5DA1L4H1 1573 aa17.96■□□□□ 0.47
PRPF39-204ENST00000553605 CHL1O00533 1208 aa17.96■□□□□ 0.47
PRPF39-204ENST00000553605 PCCAP05165 728 aaPredicted RBP17.96■□□□□ 0.47
PRPF39-204ENST00000553605 IREB2P48200 963 aaKnown RBP17.96■□□□□ 0.47
PRPF39-204ENST00000553605 CCT4P50991 539 aaKnown RBP17.96■□□□□ 0.47
PRPF39-204ENST00000553605 LMOD3Q0VAK6 560 aa17.96■□□□□ 0.47
PRPF39-204ENST00000553605 DLGAP5Q15398 846 aa17.96■□□□□ 0.47
PRPF39-204ENST00000553605 SH3TC2Q8TF17 1288 aa17.96■□□□□ 0.47
PRPF39-204ENST00000553605 JARID2Q92833 1246 aaPredicted RBP17.96■□□□□ 0.47
PRPF39-204ENST00000553605 CDC5LQ99459 802 aaKnown RBP17.96■□□□□ 0.47
PRPF39-204ENST00000553605 ZNF646O15015 1829 aaPredicted RBP17.95■□□□□ 0.46
PRPF39-204ENST00000553605 USP2O75604 605 aaPredicted RBP17.95■□□□□ 0.46
PRPF39-204ENST00000553605 TXNRD3Q86VQ6 643 aa17.95■□□□□ 0.46
PRPF39-204ENST00000553605 ANKRD13AQ8IZ07 590 aa17.95■□□□□ 0.46
PRPF39-204ENST00000553605 ZFYVE28Q9HCC9 887 aa17.95■□□□□ 0.46
PRPF39-204ENST00000553605 BSDC1Q9NW68 430 aaPredicted RBP17.95■□□□□ 0.46
PRPF39-204ENST00000553605 HOXB7P09629 217 aa17.94■□□□□ 0.46
PRPF39-204ENST00000553605 GTF2IP78347 998 aa17.94■□□□□ 0.46
PRPF39-204ENST00000553605 NBPF12Q5TAG4 269 aaPredicted RBP17.94■□□□□ 0.46
PRPF39-204ENST00000553605 CCDC191Q8NCU4 936 aa17.94■□□□□ 0.46
PRPF39-204ENST00000553605 MYD88Q99836 296 aa17.94■□□□□ 0.46
PRPF39-204ENST00000553605 LAS1LQ9Y4W2 734 aaKnown RBP17.94■□□□□ 0.46
PRPF39-204ENST00000553605 TMPOP42166 694 aaKnown RBP17.93■□□□□ 0.46
PRPF39-204ENST00000553605 GOLGA2Q08379 1002 aa17.93■□□□□ 0.46
PRPF39-204ENST00000553605 TAF1CQ15572 869 aaPredicted RBP17.93■□□□□ 0.46
PRPF39-204ENST00000553605 OPTNQ96CV9 577 aa17.93■□□□□ 0.46
PRPF39-204ENST00000553605 MS4A4AQ96JQ5 239 aa17.93■□□□□ 0.46
PRPF39-204ENST00000553605 PRO3102Q9H379 93 aa17.93■□□□□ 0.46
PRPF39-204ENST00000553605 LEMD3Q9Y2U8 911 aa17.93■□□□□ 0.46
PRPF39-204ENST00000553605 MNX1P50219 401 aaPredicted RBP17.92■□□□□ 0.46
PRPF39-204ENST00000553605 MTMR14Q8NCE2 650 aa17.92■□□□□ 0.46
PRPF39-204ENST00000553605 CCER1Q8TC90 406 aaPredicted RBP17.92■□□□□ 0.46
PRPF39-204ENST00000553605 ELP3Q9H9T3 547 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms