RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 TNMDQ9H2S6 317 aa6.2□□□□□ -1.42
TMEM55B-204ENST00000553602 TTC12Q9H892 705 aaPredicted RBP6.2□□□□□ -1.42
TMEM55B-204ENST00000553602 LGR6Q9HBX8 967 aa6.2□□□□□ -1.42
TMEM55B-204ENST00000553602 CFAP45Q9UL16 551 aa6.2□□□□□ -1.42
TMEM55B-204ENST00000553602 ARFGEF2Q9Y6D5 1785 aa6.2□□□□□ -1.42
TMEM55B-204ENST00000553602 ABCC12Q96J65 1359 aa6.19□□□□□ -1.42
TMEM55B-204ENST00000553602 KDM6AO15550 1401 aaPredicted RBP6.19□□□□□ -1.42
TMEM55B-204ENST00000553602 DCCP43146 1447 aa6.19□□□□□ -1.42
TMEM55B-204ENST00000553602 A0A0D9SFI3 127 aa6.19□□□□□ -1.42
TMEM55B-204ENST00000553602 SMTNL1A8MU46 457 aa6.19□□□□□ -1.42
TMEM55B-204ENST00000553602 KIF2AO00139 706 aaPredicted RBP6.19□□□□□ -1.42
TMEM55B-204ENST00000553602 AP5Z1O43299 807 aa6.19□□□□□ -1.42
TMEM55B-204ENST00000553602 TAF5LO75529 589 aa6.19□□□□□ -1.42
TMEM55B-204ENST00000553602 MAP4K4O95819 1239 aaPredicted RBP6.19□□□□□ -1.42
TMEM55B-204ENST00000553602 EIF2S2P20042 333 aaKnown RBP6.19□□□□□ -1.42
TMEM55B-204ENST00000553602 KCNJ4P48050 445 aa6.19□□□□□ -1.42
TMEM55B-204ENST00000553602 KCNJ6P48051 423 aa6.19□□□□□ -1.42
TMEM55B-204ENST00000553602 ZNF75DP51815 510 aa6.19□□□□□ -1.42
TMEM55B-204ENST00000553602 RBM10P98175 930 aaKnown RBP6.19□□□□□ -1.42
TMEM55B-204ENST00000553602 NEXNQ0ZGT2 675 aa6.19□□□□□ -1.42
TMEM55B-204ENST00000553602 GCKRQ14397 625 aa6.19□□□□□ -1.42
TMEM55B-204ENST00000553602 NUTM2GQ5VZR2 741 aa6.19□□□□□ -1.42
TMEM55B-204ENST00000553602 ZNF710Q8N1W2 664 aa6.19□□□□□ -1.42
TMEM55B-204ENST00000553602 SUCLG2Q96I99 432 aa6.19□□□□□ -1.42
TMEM55B-204ENST00000553602 SPATA32Q96LK8 384 aa6.19□□□□□ -1.42
TMEM55B-204ENST00000553602 FAM227BQ96M60 508 aa6.19□□□□□ -1.42
TMEM55B-204ENST00000553602 FSD1Q9BTV5 496 aa6.19□□□□□ -1.42
TMEM55B-204ENST00000553602 GTPBP4Q9BZE4 634 aaKnown RBP6.19□□□□□ -1.42
TMEM55B-204ENST00000553602 BICC1Q9H694 974 aaKnown RBP6.19□□□□□ -1.42
TMEM55B-204ENST00000553602 GPR108Q9NPR9 543 aa6.19□□□□□ -1.42
TMEM55B-204ENST00000553602 PAXBP1Q9Y5B6 917 aa6.19□□□□□ -1.42
TMEM55B-204ENST00000553602 SALL1Q9NSC2 1324 aa6.19□□□□□ -1.42
TMEM55B-204ENST00000553602 NUP188Q5SRE5 1749 aa6.19□□□□□ -1.42
TMEM55B-204ENST00000553602 PAPPAQ13219 1627 aa6.18□□□□□ -1.42
TMEM55B-204ENST00000553602 ZNF609O15014 1411 aa6.18□□□□□ -1.42
TMEM55B-204ENST00000553602 GOLGA6L4A6NEF3 574 aa6.18□□□□□ -1.42
TMEM55B-204ENST00000553602 NEURL1BA8MQ27 555 aa6.18□□□□□ -1.42
TMEM55B-204ENST00000553602 PFKFB2O60825 505 aa6.18□□□□□ -1.42
TMEM55B-204ENST00000553602 TUBB4AP04350 444 aa6.18□□□□□ -1.42
TMEM55B-204ENST00000553602 LIG1P18858 919 aa6.18□□□□□ -1.42
TMEM55B-204ENST00000553602 FECHP22830 423 aa6.18□□□□□ -1.42
TMEM55B-204ENST00000553602 RFX5P48382 616 aaPredicted RBP6.18□□□□□ -1.42
TMEM55B-204ENST00000553602 EVCP57679 992 aa6.18□□□□□ -1.42
TMEM55B-204ENST00000553602 FAM193AP78312 1265 aa6.18□□□□□ -1.42
TMEM55B-204ENST00000553602 RBM6P78332 1123 aaKnown RBP6.18□□□□□ -1.42
TMEM55B-204ENST00000553602 DMTNQ08495 405 aa6.18□□□□□ -1.42
TMEM55B-204ENST00000553602 STX1AQ16623 288 aa6.18□□□□□ -1.42
TMEM55B-204ENST00000553602 LRP10Q7Z4F1 713 aa6.18□□□□□ -1.42
TMEM55B-204ENST00000553602 CREBRFQ8IUR6 639 aa6.18□□□□□ -1.42
TMEM55B-204ENST00000553602 PARP9Q8IXQ6 854 aa6.18□□□□□ -1.42
TMEM55B-204ENST00000553602 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.18□□□□□ -1.42
TMEM55B-204ENST00000553602 EPAS1Q99814 870 aa6.18□□□□□ -1.42
TMEM55B-204ENST00000553602 HAUS7Q99871 368 aa6.18□□□□□ -1.42
TMEM55B-204ENST00000553602 METTL22Q9BUU2 404 aaPredicted RBP6.18□□□□□ -1.42
TMEM55B-204ENST00000553602 DSCC1Q9BVC3 393 aa6.18□□□□□ -1.42
TMEM55B-204ENST00000553602 BCL2L12Q9HB09 334 aa6.18□□□□□ -1.42
TMEM55B-204ENST00000553602 CBX8Q9HC52 389 aa6.18□□□□□ -1.42
TMEM55B-204ENST00000553602 DACT1Q9NYF0 836 aa6.18□□□□□ -1.42
TMEM55B-204ENST00000553602 RCOR1Q9UKL0 485 aa6.18□□□□□ -1.42
TMEM55B-204ENST00000553602 PRDM4Q9UKN5 801 aa6.18□□□□□ -1.42
TMEM55B-204ENST00000553602 PYCARDQ9ULZ3 195 aa6.18□□□□□ -1.42
TMEM55B-204ENST00000553602 TJP1Q07157 1748 aa6.18□□□□□ -1.42
TMEM55B-204ENST00000553602 ERBB3P21860 1342 aa6.18□□□□□ -1.42
TMEM55B-204ENST00000553602 WDR19Q8NEZ3 1342 aa6.18□□□□□ -1.42
TMEM55B-204ENST00000553602 COL18A1P39060 1754 aa6.18□□□□□ -1.42
TMEM55B-204ENST00000553602 UBR2Q8IWV8 1755 aa6.18□□□□□ -1.42
TMEM55B-204ENST00000553602 A0A1W2PQ27 194 aa6.17□□□□□ -1.42
TMEM55B-204ENST00000553602 A0A1W2PQ64 194 aa6.17□□□□□ -1.42
TMEM55B-204ENST00000553602 A0A1W2PQD8 194 aa6.17□□□□□ -1.42
TMEM55B-204ENST00000553602 KCNQ3O43525 872 aa6.17□□□□□ -1.42
TMEM55B-204ENST00000553602 KIF20AO95235 890 aa6.17□□□□□ -1.42
TMEM55B-204ENST00000553602 GCP02774 474 aa6.17□□□□□ -1.42
TMEM55B-204ENST00000553602 IGKV5-2P06315 115 aa6.17□□□□□ -1.42
TMEM55B-204ENST00000553602 CPA1P15085 419 aa6.17□□□□□ -1.42
TMEM55B-204ENST00000553602 ZNF165P49910 485 aa6.17□□□□□ -1.42
TMEM55B-204ENST00000553602 GSDMDP57764 484 aa6.17□□□□□ -1.42
TMEM55B-204ENST00000553602 EN1Q05925 392 aaPredicted RBP6.17□□□□□ -1.42
TMEM55B-204ENST00000553602 TTLL12Q14166 644 aaPredicted RBP6.17□□□□□ -1.42
TMEM55B-204ENST00000553602 PROSER3Q2NL68 480 aa6.17□□□□□ -1.42
TMEM55B-204ENST00000553602 CWF19L2Q2TBE0 894 aaKnown RBP6.17□□□□□ -1.42
TMEM55B-204ENST00000553602 SLFNL1Q499Z3 407 aa6.17□□□□□ -1.42
TMEM55B-204ENST00000553602 ANO6Q4KMQ2 910 aa6.17□□□□□ -1.42
TMEM55B-204ENST00000553602 TNNI3KQ59H18 835 aa6.17□□□□□ -1.42
TMEM55B-204ENST00000553602 ZSCAN25Q6NSZ9 544 aa6.17□□□□□ -1.42
TMEM55B-204ENST00000553602 ZNF790Q6PG37 636 aa6.17□□□□□ -1.42
TMEM55B-204ENST00000553602 USHBP1Q8N6Y0 703 aa6.17□□□□□ -1.42
TMEM55B-204ENST00000553602 KBTBD3Q8NAB2 608 aa6.17□□□□□ -1.42
TMEM55B-204ENST00000553602 LTV1Q96GA3 475 aaPredicted RBP6.17□□□□□ -1.42
TMEM55B-204ENST00000553602 NEK1Q96PY6 1258 aa6.17□□□□□ -1.42
TMEM55B-204ENST00000553602 BPIFA3Q9BQP9 254 aa6.17□□□□□ -1.42
TMEM55B-204ENST00000553602 FAM117AQ9C073 453 aa6.17□□□□□ -1.42
TMEM55B-204ENST00000553602 SLC52A2Q9HAB3 445 aa6.17□□□□□ -1.42
TMEM55B-204ENST00000553602 HELLSQ9NRZ9 838 aa6.17□□□□□ -1.42
TMEM55B-204ENST00000553602 ATG3Q9NT62 314 aa6.17□□□□□ -1.42
TMEM55B-204ENST00000553602 IMPACTQ9P2X3 320 aa6.17□□□□□ -1.42
TMEM55B-204ENST00000553602 PA2G4Q9UQ80 394 aaKnown RBP6.17□□□□□ -1.42
TMEM55B-204ENST00000553602 FPGT-TNNI3KV9GXZ4 949 aa6.17□□□□□ -1.42
TMEM55B-204ENST00000553602 AFDNP55196 1824 aaKnown RBP6.17□□□□□ -1.42
TMEM55B-204ENST00000553602 COL22A1Q8NFW1 1626 aaPredicted RBP6.17□□□□□ -1.42
TMEM55B-204ENST00000553602 MAP3K7O43318 606 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms