RNA–Protein interactions for RNA: ENST00000553396.1

LINC00517-201, long intergenic non-protein coding RNA 517, humanhuman

TSL 3

Gene LINC00517, Length 774 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-201ENST00000553396 LDHAL6AQ6ZMR3 332 aa12.83□□□□□ -0.36
LINC00517-201ENST00000553396 USP50Q70EL3 339 aaPredicted RBP12.83□□□□□ -0.36
LINC00517-201ENST00000553396 ADARB2Q9NS39 739 aaKnown RBP12.83□□□□□ -0.36
LINC00517-201ENST00000553396 CNOT7Q9UIV1 285 aaKnown RBP12.83□□□□□ -0.36
LINC00517-201ENST00000553396 LEMD3Q9Y2U8 911 aa12.83□□□□□ -0.36
LINC00517-201ENST00000553396 H7C1D1 291 aa12.82□□□□□ -0.36
LINC00517-201ENST00000553396 PLIN1O60240 522 aa12.82□□□□□ -0.36
LINC00517-201ENST00000553396 RABL6Q3YEC7 729 aaPredicted RBP12.82□□□□□ -0.36
LINC00517-201ENST00000553396 CNTROBQ8N137 903 aa12.82□□□□□ -0.36
LINC00517-201ENST00000553396 TRPM4Q8TD43 1214 aa12.82□□□□□ -0.36
LINC00517-201ENST00000553396 FBXW7Q969H0 707 aa12.82□□□□□ -0.36
LINC00517-201ENST00000553396 PUS3Q9BZE2 481 aaKnown RBP12.82□□□□□ -0.36
LINC00517-201ENST00000553396 TNNQ9UQP3 1299 aa12.82□□□□□ -0.36
LINC00517-201ENST00000553396 PASKQ96RG2 1323 aa12.82□□□□□ -0.36
LINC00517-201ENST00000553396 POLR2AP24928 1970 aaKnown RBP12.81□□□□□ -0.36
LINC00517-201ENST00000553396 ITGBL1O95965 494 aaPredicted RBP12.81□□□□□ -0.36
LINC00517-201ENST00000553396 UBTFL1P0CB47 393 aaPredicted RBP12.81□□□□□ -0.36
LINC00517-201ENST00000553396 TRIM27P14373 513 aa12.81□□□□□ -0.36
LINC00517-201ENST00000553396 RPS12P25398 132 aaKnown RBP12.81□□□□□ -0.36
LINC00517-201ENST00000553396 SAMD7Q7Z3H4 446 aa12.81□□□□□ -0.36
LINC00517-201ENST00000553396 PODNQ7Z5L7 613 aa12.81□□□□□ -0.36
LINC00517-201ENST00000553396 KLHDC4Q8TBB5 520 aa12.81□□□□□ -0.36
LINC00517-201ENST00000553396 ARHGAP45Q92619 1136 aa12.81□□□□□ -0.36
LINC00517-201ENST00000553396 DPF2Q92785 391 aa12.81□□□□□ -0.36
LINC00517-201ENST00000553396 CLUAP1Q96AJ1 413 aa12.81□□□□□ -0.36
LINC00517-201ENST00000553396 TRPM7Q96QT4 1865 aa12.8□□□□□ -0.36
LINC00517-201ENST00000553396 IPO8O15397 1037 aaKnown RBP12.8□□□□□ -0.36
LINC00517-201ENST00000553396 EGFRP00533 1210 aa12.8□□□□□ -0.36
LINC00517-201ENST00000553396 VIL1P09327 827 aaKnown RBP12.8□□□□□ -0.36
LINC00517-201ENST00000553396 HIRAP54198 1017 aaPredicted RBP12.8□□□□□ -0.36
LINC00517-201ENST00000553396 TBC1D10BQ4KMP7 808 aaPredicted RBP12.8□□□□□ -0.36
LINC00517-201ENST00000553396 RBM26Q5T8P6 1007 aaKnown RBP12.8□□□□□ -0.36
LINC00517-201ENST00000553396 RSBN1LQ6PCB5 846 aaPredicted RBP12.8□□□□□ -0.36
LINC00517-201ENST00000553396 ATF7IPQ6VMQ6 1270 aa12.8□□□□□ -0.36
LINC00517-201ENST00000553396 MEIS3Q99687 375 aa12.8□□□□□ -0.36
LINC00517-201ENST00000553396 MXD3Q9BW11 206 aa12.8□□□□□ -0.36
LINC00517-201ENST00000553396 COA1Q9GZY4 146 aa12.8□□□□□ -0.36
LINC00517-201ENST00000553396 USP17L3A6NCW0 530 aa12.79□□□□□ -0.36
LINC00517-201ENST00000553396 USP17L4A6NCW7 530 aa12.79□□□□□ -0.36
LINC00517-201ENST00000553396 FMR1Q06787 632 aaKnown RBP eCLIP12.79□□□□□ -0.36
LINC00517-201ENST00000553396 LRRC24Q50LG9 513 aa12.79□□□□□ -0.36
LINC00517-201ENST00000553396 USP17L1Q7RTZ2 530 aa12.79□□□□□ -0.36
LINC00517-201ENST00000553396 DNAJC5GQ8N7S2 189 aa12.79□□□□□ -0.36
LINC00517-201ENST00000553396 LRRFIP2Q9Y608 721 aaKnown RBP12.79□□□□□ -0.36
LINC00517-201ENST00000553396 TRAF5O00463 557 aa12.78□□□□□ -0.36
LINC00517-201ENST00000553396 KIF4BQ2VIQ3 1234 aa12.78□□□□□ -0.36
LINC00517-201ENST00000553396 ZKSCAN2Q63HK3 967 aa12.78□□□□□ -0.36
LINC00517-201ENST00000553396 INTS3Q68E01 1043 aaKnown RBP12.78□□□□□ -0.36
LINC00517-201ENST00000553396 AGBL3Q8NEM8 1001 aa12.78□□□□□ -0.36
LINC00517-201ENST00000553396 KLRG1Q96E93 195 aa12.78□□□□□ -0.36
LINC00517-201ENST00000553396 CREBZFQ9NS37 354 aa12.78□□□□□ -0.36
LINC00517-201ENST00000553396 RIPOR2Q9Y4F9 1068 aa12.78□□□□□ -0.36
LINC00517-201ENST00000553396 IRS2Q9Y4H2 1338 aa12.78□□□□□ -0.36
LINC00517-201ENST00000553396 ZNF609O15014 1411 aa12.78□□□□□ -0.36
LINC00517-201ENST00000553396 GTF2IP78347 998 aa12.77□□□□□ -0.37
LINC00517-201ENST00000553396 METTL24Q5JXM2 366 aa12.77□□□□□ -0.37
LINC00517-201ENST00000553396 DACT2Q5SW24 774 aa12.77□□□□□ -0.37
LINC00517-201ENST00000553396 ZNF804AQ7Z570 1209 aa12.77□□□□□ -0.37
LINC00517-201ENST00000553396 GLIS2Q9BZE0 524 aaPredicted RBP12.77□□□□□ -0.37
LINC00517-201ENST00000553396 CD209Q9NNX6 404 aa12.77□□□□□ -0.37
LINC00517-201ENST00000553396 MROH5Q6ZUA9 1318 aa12.77□□□□□ -0.37
LINC00517-201ENST00000553396 TMEM88BA6NKF7 163 aa12.76□□□□□ -0.37
LINC00517-201ENST00000553396 USP17L8P0C7I0 530 aa12.76□□□□□ -0.37
LINC00517-201ENST00000553396 RFX5P48382 616 aaPredicted RBP12.76□□□□□ -0.37
LINC00517-201ENST00000553396 STRIP1Q5VSL9 837 aa12.76□□□□□ -0.37
LINC00517-201ENST00000553396 TTLL5Q6EMB2 1281 aa12.76□□□□□ -0.37
LINC00517-201ENST00000553396 C15orf52Q6ZUT6 534 aaKnown RBP12.76□□□□□ -0.37
LINC00517-201ENST00000553396 TMEM57Q8N5G2 664 aa12.76□□□□□ -0.37
LINC00517-201ENST00000553396 GMLQ99445 158 aa12.76□□□□□ -0.37
LINC00517-201ENST00000553396 SIL1Q9H173 461 aa12.76□□□□□ -0.37
LINC00517-201ENST00000553396 MKRN1Q9UHC7 482 aaKnown RBP12.76□□□□□ -0.37
LINC00517-201ENST00000553396 JAG2Q9Y219 1238 aa12.76□□□□□ -0.37
LINC00517-201ENST00000553396 ASTN2O75129 1339 aaPredicted RBP12.76□□□□□ -0.37
LINC00517-201ENST00000553396 EYA2O00167 538 aa12.75□□□□□ -0.37
LINC00517-201ENST00000553396 GYG1P46976 350 aa12.75□□□□□ -0.37
LINC00517-201ENST00000553396 ZNF280AP59817 542 aaPredicted RBP12.75□□□□□ -0.37
LINC00517-201ENST00000553396 PTPN12Q05209 780 aaKnown RBP12.75□□□□□ -0.37
LINC00517-201ENST00000553396 UBE4AQ14139 1066 aa12.75□□□□□ -0.37
LINC00517-201ENST00000553396 FTSJ3Q8IY81 847 aaKnown RBP12.75□□□□□ -0.37
LINC00517-201ENST00000553396 VGLL2Q8N8G2 317 aa12.75□□□□□ -0.37
LINC00517-201ENST00000553396 ZC3H15Q8WU90 426 aaKnown RBP12.75□□□□□ -0.37
LINC00517-201ENST00000553396 MYO3BQ8WXR4 1341 aa12.75□□□□□ -0.37
LINC00517-201ENST00000553396 ZNF408Q9H9D4 720 aa12.75□□□□□ -0.37
LINC00517-201ENST00000553396 GGA3Q9NZ52 723 aa12.75□□□□□ -0.37
LINC00517-201ENST00000553396 PGAP2Q9UHJ9 254 aa12.75□□□□□ -0.37
LINC00517-201ENST00000553396 MYH13Q9UKX3 1938 aa12.74□□□□□ -0.37
LINC00517-201ENST00000553396 GNAI3P08754 354 aa12.74□□□□□ -0.37
LINC00517-201ENST00000553396 DLK2Q6UY11 383 aa12.74□□□□□ -0.37
LINC00517-201ENST00000553396 USP48Q86UV5 1035 aa12.74□□□□□ -0.37
LINC00517-201ENST00000553396 KIAA0825Q8IV33 1275 aa12.74□□□□□ -0.37
LINC00517-201ENST00000553396 MYOZ2Q9NPC6 264 aa12.74□□□□□ -0.37
LINC00517-201ENST00000553396 ABT1Q9ULW3 272 aaKnown RBP12.74□□□□□ -0.37
LINC00517-201ENST00000553396 PA2G4Q9UQ80 394 aaKnown RBP12.74□□□□□ -0.37
LINC00517-201ENST00000553396 HDAC5Q9UQL6 1122 aa12.74□□□□□ -0.37
LINC00517-201ENST00000553396 ARAP2Q8WZ64 1704 aa12.74□□□□□ -0.37
LINC00517-201ENST00000553396 ADM5C9JUS6 153 aa12.73□□□□□ -0.37
LINC00517-201ENST00000553396 F8W031 263 aaPredicted RBP12.73□□□□□ -0.37
LINC00517-201ENST00000553396 PDE8BO95263 885 aa12.73□□□□□ -0.37
LINC00517-201ENST00000553396 CELF2O95319 508 aaKnown RBP12.73□□□□□ -0.37
LINC00517-201ENST00000553396 RLBP1P12271 317 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms