RNA–Protein interactions for RNA: ENST00000553171.1

PFDN5-219, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-219ENST00000553171 IQCA1LA6NCM1 817 aa5.9□□□□□ -1.46
PFDN5-219ENST00000553171 H0YGN5 161 aa5.9□□□□□ -1.46
PFDN5-219ENST00000553171 GCP02774 474 aa5.9□□□□□ -1.46
PFDN5-219ENST00000553171 MMP10P09238 476 aa5.9□□□□□ -1.46
PFDN5-219ENST00000553171 ABCD1P33897 745 aa5.9□□□□□ -1.46
PFDN5-219ENST00000553171 EMP3P54852 163 aa5.9□□□□□ -1.46
PFDN5-219ENST00000553171 IRX5P78411 483 aaPredicted RBP5.9□□□□□ -1.46
PFDN5-219ENST00000553171 MAP3K12Q12852 859 aa5.9□□□□□ -1.46
PFDN5-219ENST00000553171 CT47A1Q5JQC4 288 aaPredicted RBP5.9□□□□□ -1.46
PFDN5-219ENST00000553171 NUTM2GQ5VZR2 741 aa5.9□□□□□ -1.46
PFDN5-219ENST00000553171 CIAPIN1Q6FI81 312 aa5.9□□□□□ -1.46
PFDN5-219ENST00000553171 CCDC73Q6ZRK6 1079 aa5.9□□□□□ -1.46
PFDN5-219ENST00000553171 AMIGO3Q86WK7 504 aa5.9□□□□□ -1.46
PFDN5-219ENST00000553171 GPATCH3Q96I76 525 aa5.9□□□□□ -1.46
PFDN5-219ENST00000553171 PAGR1Q9BTK6 254 aa5.9□□□□□ -1.46
PFDN5-219ENST00000553171 INO80BQ9C086 356 aaPredicted RBP5.9□□□□□ -1.46
PFDN5-219ENST00000553171 PRO3102Q9H379 93 aa5.9□□□□□ -1.46
PFDN5-219ENST00000553171 IFT122Q9HBG6 1241 aa5.9□□□□□ -1.46
PFDN5-219ENST00000553171 BRMS1Q9HCU9 246 aa5.9□□□□□ -1.46
PFDN5-219ENST00000553171 DDX21Q9NR30 783 aaKnown RBP eCLIP5.9□□□□□ -1.46
PFDN5-219ENST00000553171 SAGE1Q9NXZ1 904 aa5.9□□□□□ -1.46
PFDN5-219ENST00000553171 TLL2Q9Y6L7 1015 aa5.9□□□□□ -1.46
PFDN5-219ENST00000553171 E9PCH4 1651 aa5.9□□□□□ -1.47
PFDN5-219ENST00000553171 LY75O60449 1722 aa5.9□□□□□ -1.47
PFDN5-219ENST00000553171 SBNO2Q9Y2G9 1366 aa5.9□□□□□ -1.47
PFDN5-219ENST00000553171 BAHCC1Q9P281 2608 aa5.89□□□□□ -1.47
PFDN5-219ENST00000553171 IFT172Q9UG01 1749 aa5.89□□□□□ -1.47
PFDN5-219ENST00000553171 ESPNB1AK53 854 aa5.89□□□□□ -1.47
PFDN5-219ENST00000553171 SNPHO15079 494 aa5.89□□□□□ -1.47
PFDN5-219ENST00000553171 CCP110O43303 1012 aa5.89□□□□□ -1.47
PFDN5-219ENST00000553171 ZSCAN20P17040 1043 aaPredicted RBP5.89□□□□□ -1.47
PFDN5-219ENST00000553171 PSMD2Q13200 908 aa5.89□□□□□ -1.47
PFDN5-219ENST00000553171 SWT1Q5T5J6 900 aaKnown RBP5.89□□□□□ -1.47
PFDN5-219ENST00000553171 GPR153Q6NV75 609 aa5.89□□□□□ -1.47
PFDN5-219ENST00000553171 CATIPQ7Z7H3 387 aa5.89□□□□□ -1.47
PFDN5-219ENST00000553171 PIK3R5Q8WYR1 880 aa5.89□□□□□ -1.47
PFDN5-219ENST00000553171 RSPH1Q8WYR4 309 aa5.89□□□□□ -1.47
PFDN5-219ENST00000553171 SPOCK2Q92563 424 aa5.89□□□□□ -1.47
PFDN5-219ENST00000553171 C22orf23Q9BZE7 217 aa5.89□□□□□ -1.47
PFDN5-219ENST00000553171 UTP6Q9NYH9 597 aaKnown RBP5.89□□□□□ -1.47
PFDN5-219ENST00000553171 GABBR1Q9UBS5 961 aa5.89□□□□□ -1.47
PFDN5-219ENST00000553171 TMA7Q9Y2S6 64 aaKnown RBP5.89□□□□□ -1.47
PFDN5-219ENST00000553171 ABCC6O95255 1503 aa5.89□□□□□ -1.47
PFDN5-219ENST00000553171 KIAA0100Q14667 2235 aaKnown RBP5.89□□□□□ -1.47
PFDN5-219ENST00000553171 CCDC189A1A4V9 331 aa5.88□□□□□ -1.47
PFDN5-219ENST00000553171 SOX1O00570 391 aaPredicted RBP5.88□□□□□ -1.47
PFDN5-219ENST00000553171 KIF5CO60282 957 aa5.88□□□□□ -1.47
PFDN5-219ENST00000553171 DDNO94850 711 aaPredicted RBP5.88□□□□□ -1.47
PFDN5-219ENST00000553171 HSP90AB1P08238 724 aaKnown RBP5.88□□□□□ -1.47
PFDN5-219ENST00000553171 NAT1P18440 290 aa5.88□□□□□ -1.47
PFDN5-219ENST00000553171 MAN1A1P33908 653 aa5.88□□□□□ -1.47
PFDN5-219ENST00000553171 IFT88Q13099 833 aa5.88□□□□□ -1.47
PFDN5-219ENST00000553171 BIRC2Q13490 618 aa5.88□□□□□ -1.47
PFDN5-219ENST00000553171 PTPROQ16827 1216 aa5.88□□□□□ -1.47
PFDN5-219ENST00000553171 DPH6Q7L8W6 267 aa5.88□□□□□ -1.47
PFDN5-219ENST00000553171 NOP9Q86U38 636 aaKnown RBP5.88□□□□□ -1.47
PFDN5-219ENST00000553171 ZSCAN30Q86W11 494 aa5.88□□□□□ -1.47
PFDN5-219ENST00000553171 CCDC146Q8IYE0 955 aa5.88□□□□□ -1.47
PFDN5-219ENST00000553171 LARGE2Q8N3Y3 721 aa5.88□□□□□ -1.47
PFDN5-219ENST00000553171 NGDNQ8NEJ9 315 aaKnown RBP5.88□□□□□ -1.47
PFDN5-219ENST00000553171 VPS37AQ8NEZ2 397 aa5.88□□□□□ -1.47
PFDN5-219ENST00000553171 HHIPL1Q96JK4 782 aa5.88□□□□□ -1.47
PFDN5-219ENST00000553171 L3MBTL3Q96JM7 780 aaPredicted RBP5.88□□□□□ -1.47
PFDN5-219ENST00000553171 POLR3CQ9BUI4 534 aaPredicted RBP5.88□□□□□ -1.47
PFDN5-219ENST00000553171 CXorf56Q9H5V9 222 aa5.88□□□□□ -1.47
PFDN5-219ENST00000553171 MED4Q9NPJ6 270 aa5.88□□□□□ -1.47
PFDN5-219ENST00000553171 CHCHD3Q9NX63 227 aaKnown RBP5.88□□□□□ -1.47
PFDN5-219ENST00000553171 MAP3K20Q9NYL2 800 aaKnown RBP5.88□□□□□ -1.47
PFDN5-219ENST00000553171 CGNQ9P2M7 1197 aaKnown RBP5.88□□□□□ -1.47
PFDN5-219ENST00000553171 SUN2Q9UH99 717 aa5.88□□□□□ -1.47
PFDN5-219ENST00000553171 ODF2LQ9ULJ1 636 aa5.88□□□□□ -1.47
PFDN5-219ENST00000553171 SCINQ9Y6U3 715 aa5.88□□□□□ -1.47
PFDN5-219ENST00000553171 ANKRD30AQ9BXX3 1397 aa5.88□□□□□ -1.47
PFDN5-219ENST00000553171 CCDC66A2RUB6 948 aa5.87□□□□□ -1.47
PFDN5-219ENST00000553171 FAM205CA6NFA0 338 aa5.87□□□□□ -1.47
PFDN5-219ENST00000553171 GOLGA6L22H0YM25 854 aa5.87□□□□□ -1.47
PFDN5-219ENST00000553171 IBSPP21815 317 aaPredicted RBP5.87□□□□□ -1.47
PFDN5-219ENST00000553171 ATICP31939 592 aa5.87□□□□□ -1.47
PFDN5-219ENST00000553171 EIF5P55010 431 aaKnown RBP5.87□□□□□ -1.47
PFDN5-219ENST00000553171 DDX10Q13206 875 aaKnown RBP5.87□□□□□ -1.47
PFDN5-219ENST00000553171 PDAP1Q13442 181 aaKnown RBP5.87□□□□□ -1.47
PFDN5-219ENST00000553171 CCDC184Q52MB2 194 aa5.87□□□□□ -1.47
PFDN5-219ENST00000553171 AKAP4Q5JQC9 854 aa5.87□□□□□ -1.47
PFDN5-219ENST00000553171 LRCH2Q5VUJ6 765 aa5.87□□□□□ -1.47
PFDN5-219ENST00000553171 CST9Q5W186 159 aa5.87□□□□□ -1.47
PFDN5-219ENST00000553171 MAP1SQ66K74 1059 aaPredicted RBP5.87□□□□□ -1.47
PFDN5-219ENST00000553171 CCDC174Q6PII3 467 aa5.87□□□□□ -1.47
PFDN5-219ENST00000553171 DRC7Q8IY82 874 aa5.87□□□□□ -1.47
PFDN5-219ENST00000553171 TTC30BQ8N4P2 665 aa5.87□□□□□ -1.47
PFDN5-219ENST00000553171 SAMD3Q8N6K7 520 aa5.87□□□□□ -1.47
PFDN5-219ENST00000553171 CCDC47Q96A33 483 aaKnown RBP5.87□□□□□ -1.47
PFDN5-219ENST00000553171 LRCH3Q96II8 777 aa5.87□□□□□ -1.47
PFDN5-219ENST00000553171 AK7Q96M32 723 aa5.87□□□□□ -1.47
PFDN5-219ENST00000553171 CEP63Q96MT8 703 aa5.87□□□□□ -1.47
PFDN5-219ENST00000553171 IPO9Q96P70 1041 aaKnown RBP5.87□□□□□ -1.47
PFDN5-219ENST00000553171 CDC5LQ99459 802 aaKnown RBP5.87□□□□□ -1.47
PFDN5-219ENST00000553171 P2RX7Q99572 595 aaKnown RBP5.87□□□□□ -1.47
PFDN5-219ENST00000553171 NAP1L4Q99733 375 aaKnown RBP5.87□□□□□ -1.47
PFDN5-219ENST00000553171 CCDC87Q9NVE4 849 aa5.87□□□□□ -1.47
PFDN5-219ENST00000553171 ISY1Q9ULR0 285 aaKnown RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms