RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 COL9A1P20849 921 aa6.91□□□□□ -1.3
CKAP4-203ENST00000553039 PIP4K2AP48426 406 aaPredicted RBP6.91□□□□□ -1.3
CKAP4-203ENST00000553039 MMP14P50281 582 aa6.91□□□□□ -1.3
CKAP4-203ENST00000553039 PTPN12Q05209 780 aaKnown RBP6.91□□□□□ -1.3
CKAP4-203ENST00000553039 MAP2K5Q13163 448 aa6.91□□□□□ -1.3
CKAP4-203ENST00000553039 KIF22Q14807 665 aa6.91□□□□□ -1.3
CKAP4-203ENST00000553039 PARP10Q53GL7 1025 aa6.91□□□□□ -1.3
CKAP4-203ENST00000553039 SUSD4Q5VX71 490 aa6.91□□□□□ -1.3
CKAP4-203ENST00000553039 KIF6Q6ZMV9 814 aa6.91□□□□□ -1.3
CKAP4-203ENST00000553039 MOB2Q70IA6 237 aa6.91□□□□□ -1.3
CKAP4-203ENST00000553039 GAS2L2Q8NHY3 880 aa6.91□□□□□ -1.3
CKAP4-203ENST00000553039 FAM122AQ96E09 287 aa6.91□□□□□ -1.3
CKAP4-203ENST00000553039 LRCH3Q96II8 777 aa6.91□□□□□ -1.3
CKAP4-203ENST00000553039 NSFL1CQ9UNZ2 370 aaKnown RBP6.91□□□□□ -1.3
CKAP4-203ENST00000553039 RIMBP2O15034 1052 aa6.9□□□□□ -1.3
CKAP4-203ENST00000553039 ZBTB7BO15156 539 aaPredicted RBP6.9□□□□□ -1.3
CKAP4-203ENST00000553039 EVI5O60447 810 aa6.9□□□□□ -1.3
CKAP4-203ENST00000553039 GNRH1P01148 92 aa6.9□□□□□ -1.3
CKAP4-203ENST00000553039 HMOX1P09601 288 aa6.9□□□□□ -1.3
CKAP4-203ENST00000553039 USP17L8P0C7I0 530 aa6.9□□□□□ -1.3
CKAP4-203ENST00000553039 ZBTB48P10074 688 aaPredicted RBP6.9□□□□□ -1.3
CKAP4-203ENST00000553039 BMP8BP34820 402 aa6.9□□□□□ -1.3
CKAP4-203ENST00000553039 PRMT2P55345 433 aa6.9□□□□□ -1.3
CKAP4-203ENST00000553039 ZNF280AP59817 542 aaPredicted RBP6.9□□□□□ -1.3
CKAP4-203ENST00000553039 NGEFQ8N5V2 710 aa6.9□□□□□ -1.3
CKAP4-203ENST00000553039 UTP14AQ9BVJ6 771 aaKnown RBP6.9□□□□□ -1.3
CKAP4-203ENST00000553039 DBNDD1Q9H9R9 158 aa6.9□□□□□ -1.3
CKAP4-203ENST00000553039 MTMR10Q9NXD2 777 aa6.9□□□□□ -1.3
CKAP4-203ENST00000553039 NBPF26B4DH59 902 aa6.89□□□□□ -1.31
CKAP4-203ENST00000553039 SOX1O00570 391 aaPredicted RBP6.89□□□□□ -1.31
CKAP4-203ENST00000553039 IRF6O14896 467 aa6.89□□□□□ -1.31
CKAP4-203ENST00000553039 PPP1R12BO60237 982 aaPredicted RBP6.89□□□□□ -1.31
CKAP4-203ENST00000553039 ECE2O60344 883 aa6.89□□□□□ -1.31
CKAP4-203ENST00000553039 MYCP01106 439 aaPredicted RBP6.89□□□□□ -1.31
CKAP4-203ENST00000553039 GPTP24298 496 aa6.89□□□□□ -1.31
CKAP4-203ENST00000553039 HOXD10P28358 340 aa6.89□□□□□ -1.31
CKAP4-203ENST00000553039 CACNB1Q02641 598 aaPredicted RBP6.89□□□□□ -1.31
CKAP4-203ENST00000553039 GRAPQ13588 217 aa6.89□□□□□ -1.31
CKAP4-203ENST00000553039 DOK7Q18PE1 504 aa6.89□□□□□ -1.31
CKAP4-203ENST00000553039 LDLRAD1Q5T700 205 aa6.89□□□□□ -1.31
CKAP4-203ENST00000553039 NBPF10Q6P3W6 841 aaKnown RBP6.89□□□□□ -1.31
CKAP4-203ENST00000553039 PARP9Q8IXQ6 854 aa6.89□□□□□ -1.31
CKAP4-203ENST00000553039 ZNF34Q8IZ26 560 aa6.89□□□□□ -1.31
CKAP4-203ENST00000553039 OGFOD1Q8N543 542 aa6.89□□□□□ -1.31
CKAP4-203ENST00000553039 GRAPLQ8TC17 118 aaPredicted RBP6.89□□□□□ -1.31
CKAP4-203ENST00000553039 ZFYVE28Q9HCC9 887 aa6.89□□□□□ -1.31
CKAP4-203ENST00000553039 MYOZ2Q9NPC6 264 aa6.89□□□□□ -1.31
CKAP4-203ENST00000553039 EMILIN3Q9NT22 766 aa6.89□□□□□ -1.31
CKAP4-203ENST00000553039 STAP2Q9UGK3 403 aa6.89□□□□□ -1.31
CKAP4-203ENST00000553039 COL4A5P29400 1685 aa6.89□□□□□ -1.31
CKAP4-203ENST00000553039 CACNA1SQ13698 1873 aa6.89□□□□□ -1.31
CKAP4-203ENST00000553039 COL11A2P13942 1736 aaPredicted RBP6.88□□□□□ -1.31
CKAP4-203ENST00000553039 MRC1P22897 1456 aa6.88□□□□□ -1.31
CKAP4-203ENST00000553039 ABCC4O15439 1325 aa6.88□□□□□ -1.31
CKAP4-203ENST00000553039 MAP3K15Q6ZN16 1313 aa6.88□□□□□ -1.31
CKAP4-203ENST00000553039 DPYSL4O14531 572 aa6.88□□□□□ -1.31
CKAP4-203ENST00000553039 KCNQ3O43525 872 aa6.88□□□□□ -1.31
CKAP4-203ENST00000553039 TRAK2O60296 914 aa6.88□□□□□ -1.31
CKAP4-203ENST00000553039 CRHR2Q13324 411 aa6.88□□□□□ -1.31
CKAP4-203ENST00000553039 LRIT3Q3SXY7 679 aa6.88□□□□□ -1.31
CKAP4-203ENST00000553039 PRAMEF18Q5VWM3 479 aa6.88□□□□□ -1.31
CKAP4-203ENST00000553039 RSBN1LQ6PCB5 846 aaPredicted RBP6.88□□□□□ -1.31
CKAP4-203ENST00000553039 KCNQ5Q9NR82 932 aa6.88□□□□□ -1.31
CKAP4-203ENST00000553039 ANGEL1Q9UNK9 670 aaKnown RBP6.88□□□□□ -1.31
CKAP4-203ENST00000553039 PTCH2Q9Y6C5 1203 aa6.88□□□□□ -1.31
CKAP4-203ENST00000553039 ARFGEF2Q9Y6D5 1785 aa6.87□□□□□ -1.31
CKAP4-203ENST00000553039 IBTKQ9P2D0 1353 aaPredicted RBP6.87□□□□□ -1.31
CKAP4-203ENST00000553039 ASTN2O75129 1339 aaPredicted RBP6.87□□□□□ -1.31
CKAP4-203ENST00000553039 ERBB4Q15303 1308 aa6.87□□□□□ -1.31
CKAP4-203ENST00000553039 DIAPH1O60610 1272 aaKnown RBP6.87□□□□□ -1.31
CKAP4-203ENST00000553039 GJB1P08034 283 aa6.87□□□□□ -1.31
CKAP4-203ENST00000553039 GJA8P48165 433 aa6.87□□□□□ -1.31
CKAP4-203ENST00000553039 PRKG1Q13976 671 aa6.87□□□□□ -1.31
CKAP4-203ENST00000553039 HELBQ8NG08 1087 aaPredicted RBP6.87□□□□□ -1.31
CKAP4-203ENST00000553039 RTF1Q92541 710 aaKnown RBP6.87□□□□□ -1.31
CKAP4-203ENST00000553039 POLR3GLQ9BT43 218 aa6.87□□□□□ -1.31
CKAP4-203ENST00000553039 RRP7AQ9Y3A4 280 aaKnown RBP6.87□□□□□ -1.31
CKAP4-203ENST00000553039 RIC1Q4ADV7 1423 aa6.86□□□□□ -1.31
CKAP4-203ENST00000553039 IGF2BP3O00425 579 aaKnown RBP eCLIP6.86□□□□□ -1.31
CKAP4-203ENST00000553039 NTSR2O95665 410 aa6.86□□□□□ -1.31
CKAP4-203ENST00000553039 PLA2G5P39877 138 aa6.86□□□□□ -1.31
CKAP4-203ENST00000553039 UBXN2AP68543 259 aa6.86□□□□□ -1.31
CKAP4-203ENST00000553039 SUPT20HL1Q3ZLR7 823 aa6.86□□□□□ -1.31
CKAP4-203ENST00000553039 FAM109BQ6ICB4 259 aaPredicted RBP6.86□□□□□ -1.31
CKAP4-203ENST00000553039 GIGYF2Q6Y7W6 1299 aaKnown RBP6.86□□□□□ -1.31
CKAP4-203ENST00000553039 C3orf67Q6ZVT6 689 aa6.86□□□□□ -1.31
CKAP4-203ENST00000553039 TRIM47Q96LD4 638 aa6.86□□□□□ -1.31
CKAP4-203ENST00000553039 BIN2Q9UBW5 565 aaPredicted RBP6.86□□□□□ -1.31
CKAP4-203ENST00000553039 POLLQ9UGP5 575 aa6.86□□□□□ -1.31
CKAP4-203ENST00000553039 BCORQ6W2J9 1755 aa6.85□□□□□ -1.31
CKAP4-203ENST00000553039 ABCC12Q96J65 1359 aa6.85□□□□□ -1.31
CKAP4-203ENST00000553039 USP17L3A6NCW0 530 aa6.85□□□□□ -1.31
CKAP4-203ENST00000553039 USP17L4A6NCW7 530 aa6.85□□□□□ -1.31
CKAP4-203ENST00000553039 IREB2P48200 963 aaKnown RBP6.85□□□□□ -1.31
CKAP4-203ENST00000553039 MAP3K11Q16584 847 aa6.85□□□□□ -1.31
CKAP4-203ENST00000553039 HSP90AB3PQ58FF7 597 aa6.85□□□□□ -1.31
CKAP4-203ENST00000553039 Q7L0L9 218 aa6.85□□□□□ -1.31
CKAP4-203ENST00000553039 USP17L1Q7RTZ2 530 aa6.85□□□□□ -1.31
CKAP4-203ENST00000553039 PODNQ7Z5L7 613 aa6.85□□□□□ -1.31
CKAP4-203ENST00000553039 POTEDQ86YR6 584 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms