RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 ZNF165P49910 485 aa15.33■□□□□ 0.04
CACNB3-219ENST00000551544 EXOSC10Q01780 885 aaKnown RBP15.33■□□□□ 0.04
CACNB3-219ENST00000551544 RBM43Q6ZSC3 357 aaKnown RBP15.33■□□□□ 0.04
CACNB3-219ENST00000551544 CCDC191Q8NCU4 936 aa15.33■□□□□ 0.04
CACNB3-219ENST00000551544 PRDM11Q9NQV5 511 aa15.33■□□□□ 0.04
CACNB3-219ENST00000551544 CADPS2Q86UW7 1296 aa15.32■□□□□ 0.04
CACNB3-219ENST00000551544 PCDH11XQ9BZA7 1347 aa15.32■□□□□ 0.04
CACNB3-219ENST00000551544 PCDH11YQ9BZA8 1340 aa15.32■□□□□ 0.04
CACNB3-219ENST00000551544 M0R2C6 588 aa15.32■□□□□ 0.04
CACNB3-219ENST00000551544 GORABQ5T7V8 394 aa15.32■□□□□ 0.04
CACNB3-219ENST00000551544 CEP126Q9P2H0 1117 aa15.32■□□□□ 0.04
CACNB3-219ENST00000551544 ADD1P35611 737 aaKnown RBP15.31■□□□□ 0.04
CACNB3-219ENST00000551544 HMGN5P82970 282 aaKnown RBP15.31■□□□□ 0.04
CACNB3-219ENST00000551544 PDE4CQ08493 712 aa15.31■□□□□ 0.04
CACNB3-219ENST00000551544 NAA16Q6N069 864 aaPredicted RBP15.31■□□□□ 0.04
CACNB3-219ENST00000551544 CCDC186Q7Z3E2 898 aa15.31■□□□□ 0.04
CACNB3-219ENST00000551544 CCAR1Q8IX12 1150 aaKnown RBP15.31■□□□□ 0.04
CACNB3-219ENST00000551544 OSBP2Q969R2 916 aa15.31■□□□□ 0.04
CACNB3-219ENST00000551544 KIF3AQ9Y496 699 aa15.31■□□□□ 0.04
CACNB3-219ENST00000551544 GLI3P10071 1580 aa15.3■□□□□ 0.04
CACNB3-219ENST00000551544 ABCC6O95255 1503 aa15.3■□□□□ 0.04
CACNB3-219ENST00000551544 PDIA3P30101 505 aaKnown RBP15.3■□□□□ 0.04
CACNB3-219ENST00000551544 GTF2F1P35269 517 aaKnown RBP eCLIP15.3■□□□□ 0.04
CACNB3-219ENST00000551544 HAND2P61296 217 aa15.3■□□□□ 0.04
CACNB3-219ENST00000551544 WASHC4Q2M389 1173 aa15.3■□□□□ 0.04
CACNB3-219ENST00000551544 CCDC57Q2TAC2 916 aa15.3■□□□□ 0.04
CACNB3-219ENST00000551544 USP28Q96RU2 1077 aa15.3■□□□□ 0.04
CACNB3-219ENST00000551544 CCDC94Q9BW85 323 aaPredicted RBP15.3■□□□□ 0.04
CACNB3-219ENST00000551544 NRBP1Q9UHY1 535 aa15.3■□□□□ 0.04
CACNB3-219ENST00000551544 PKD1L3Q7Z443 1732 aa15.3■□□□□ 0.04
CACNB3-219ENST00000551544 ADORA1P30542 326 aa15.3■□□□□ 0.04
CACNB3-219ENST00000551544 GPHNQ9NQX3 736 aaPredicted RBP15.3■□□□□ 0.04
CACNB3-219ENST00000551544 FAM177BA6PVY3 158 aa15.3■□□□□ 0.04
CACNB3-219ENST00000551544 ERVV-2B6SEH9 535 aa15.3■□□□□ 0.04
CACNB3-219ENST00000551544 ZNF75DP51815 510 aa15.3■□□□□ 0.04
CACNB3-219ENST00000551544 HSP90AB3PQ58FF7 597 aa15.3■□□□□ 0.04
CACNB3-219ENST00000551544 TTC39AQ5SRH9 613 aa15.3■□□□□ 0.04
CACNB3-219ENST00000551544 CCDC158Q5M9N0 1113 aa15.29■□□□□ 0.04
CACNB3-219ENST00000551544 TDRD7Q8NHU6 1098 aaKnown RBP15.29■□□□□ 0.04
CACNB3-219ENST00000551544 AGXT2Q9BYV1 514 aa15.29■□□□□ 0.04
CACNB3-219ENST00000551544 GOLPH3LQ9H4A5 285 aa15.29■□□□□ 0.04
CACNB3-219ENST00000551544 RCOR1Q9UKL0 485 aa15.29■□□□□ 0.04
CACNB3-219ENST00000551544 CPDO75976 1380 aa15.29■□□□□ 0.04
CACNB3-219ENST00000551544 WDR17Q8IZU2 1322 aa15.29■□□□□ 0.04
CACNB3-219ENST00000551544 CIAO1O76071 339 aa15.29■□□□□ 0.04
CACNB3-219ENST00000551544 LRMPQ12912 555 aa15.29■□□□□ 0.04
CACNB3-219ENST00000551544 LAMB4A4D0S4 1761 aa15.28■□□□□ 0.04
CACNB3-219ENST00000551544 CCDC73Q6ZRK6 1079 aa15.28■□□□□ 0.04
CACNB3-219ENST00000551544 PLEKHG2Q9H7P9 1386 aa15.28■□□□□ 0.04
CACNB3-219ENST00000551544 A0A087WWV3 80 aa15.28■□□□□ 0.04
CACNB3-219ENST00000551544 ME1P48163 572 aa15.28■□□□□ 0.04
CACNB3-219ENST00000551544 TAF7LQ5H9L4 462 aa15.28■□□□□ 0.04
CACNB3-219ENST00000551544 ZNF274Q96GC6 653 aaPredicted RBP15.28■□□□□ 0.04
CACNB3-219ENST00000551544 FAM89AQ96GI7 184 aa15.28■□□□□ 0.04
CACNB3-219ENST00000551544 XAGE2Q96GT9 111 aa15.28■□□□□ 0.04
CACNB3-219ENST00000551544 ZNF396Q96N95 335 aaPredicted RBP15.28■□□□□ 0.04
CACNB3-219ENST00000551544 OTUD7BQ6GQQ9 843 aa15.27■□□□□ 0.04
CACNB3-219ENST00000551544 C11orf57Q6ZUT1 292 aaPredicted RBP15.27■□□□□ 0.04
CACNB3-219ENST00000551544 PLA2G4DQ86XP0 818 aa15.27■□□□□ 0.04
CACNB3-219ENST00000551544 STRN4Q9NRL3 753 aa15.27■□□□□ 0.04
CACNB3-219ENST00000551544 ATG3Q9NT62 314 aa15.27■□□□□ 0.04
CACNB3-219ENST00000551544 LAMA4Q16363 1823 aa15.27■□□□□ 0.04
CACNB3-219ENST00000551544 GOLGA6L19H0YKK7 550 aa15.27■□□□□ 0.03
CACNB3-219ENST00000551544 SCARF1Q14162 830 aa15.27■□□□□ 0.03
CACNB3-219ENST00000551544 RAB11FIP4Q86YS3 637 aa15.27■□□□□ 0.03
CACNB3-219ENST00000551544 SALL1Q9NSC2 1324 aa15.27■□□□□ 0.03
CACNB3-219ENST00000551544 KINO60870 393 aaKnown RBP15.26■□□□□ 0.03
CACNB3-219ENST00000551544 PI16Q6UXB8 463 aa15.26■□□□□ 0.03
CACNB3-219ENST00000551544 FBXW7Q969H0 707 aa15.26■□□□□ 0.03
CACNB3-219ENST00000551544 CLIP2Q9UDT6 1046 aa15.26■□□□□ 0.03
CACNB3-219ENST00000551544 CARMIL3Q8ND23 1372 aa15.26■□□□□ 0.03
CACNB3-219ENST00000551544 DCCP43146 1447 aa15.26■□□□□ 0.03
CACNB3-219ENST00000551544 IL2RBP14784 551 aa15.26■□□□□ 0.03
CACNB3-219ENST00000551544 CHAF1AQ13111 956 aaPredicted RBP15.26■□□□□ 0.03
CACNB3-219ENST00000551544 TCIRG1Q13488 830 aa15.26■□□□□ 0.03
CACNB3-219ENST00000551544 IMMTQ16891 758 aaKnown RBP15.26■□□□□ 0.03
CACNB3-219ENST00000551544 ILDR1Q86SU0 546 aaPredicted RBP15.26■□□□□ 0.03
CACNB3-219ENST00000551544 FSIP1Q8NA03 581 aa15.26■□□□□ 0.03
CACNB3-219ENST00000551544 ERCC4Q92889 916 aaPredicted RBP15.26■□□□□ 0.03
CACNB3-219ENST00000551544 FDPSP14324 419 aaKnown RBP15.25■□□□□ 0.03
CACNB3-219ENST00000551544 ZAP70P43403 619 aa15.25■□□□□ 0.03
CACNB3-219ENST00000551544 SNW1Q13573 536 aaKnown RBP15.25■□□□□ 0.03
CACNB3-219ENST00000551544 ISCA1Q9BUE6 129 aa15.25■□□□□ 0.03
CACNB3-219ENST00000551544 CTNNA3Q9UI47 895 aa15.25■□□□□ 0.03
CACNB3-219ENST00000551544 AKAP2Q9Y2D5 859 aa15.25■□□□□ 0.03
CACNB3-219ENST00000551544 FGAP02671 866 aa15.25■□□□□ 0.03
CACNB3-219ENST00000551544 LRRFIP1Q32MZ4 808 aaKnown RBP15.25■□□□□ 0.03
CACNB3-219ENST00000551544 TJP1Q07157 1748 aa15.25■□□□□ 0.03
CACNB3-219ENST00000551544 KCPQ6ZWJ8 1503 aa15.25■□□□□ 0.03
CACNB3-219ENST00000551544 CTAGE5O15320 804 aa15.25■□□□□ 0.03
CACNB3-219ENST00000551544 FOXP2O15409 715 aa15.25■□□□□ 0.03
CACNB3-219ENST00000551544 STX1AQ16623 288 aa15.25■□□□□ 0.03
CACNB3-219ENST00000551544 UTP14CQ5TAP6 766 aaKnown RBP15.25■□□□□ 0.03
CACNB3-219ENST00000551544 ZSCAN25Q6NSZ9 544 aa15.25■□□□□ 0.03
CACNB3-219ENST00000551544 TICAM2Q86XR7 235 aa15.25■□□□□ 0.03
CACNB3-219ENST00000551544 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.25■□□□□ 0.03
CACNB3-219ENST00000551544 PUS7LQ9H0K6 701 aaKnown RBP15.25■□□□□ 0.03
CACNB3-219ENST00000551544 PRC1O43663 620 aa15.24■□□□□ 0.03
CACNB3-219ENST00000551544 CAVIN2O95810 425 aa15.24■□□□□ 0.03
CACNB3-219ENST00000551544 IFIT5Q13325 482 aaKnown RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms