RNA–Protein interactions for RNA: ENST00000551492.5

NPAS3-210, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NPAS3, Length 2,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-210ENST00000551492 TMEM63CQ9P1W3 806 aa24.85■■□□□ 1.57
NPAS3-210ENST00000551492 LRSAM1Q6UWE0 723 aa24.85■■□□□ 1.57
NPAS3-210ENST00000551492 NSFL1CQ9UNZ2 370 aaKnown RBP24.84■■□□□ 1.57
NPAS3-210ENST00000551492 TBC1D9BQ66K14 1250 aa24.84■■□□□ 1.57
NPAS3-210ENST00000551492 DIAPH3Q9NSV4 1193 aa24.84■■□□□ 1.57
NPAS3-210ENST00000551492 SPTLC3Q9NUV7 552 aa24.84■■□□□ 1.57
NPAS3-210ENST00000551492 TJP1Q07157 1748 aa24.83■■□□□ 1.57
NPAS3-210ENST00000551492 PRPF40AO75400 957 aaKnown RBP24.83■■□□□ 1.57
NPAS3-210ENST00000551492 HELBQ8NG08 1087 aaPredicted RBP24.83■■□□□ 1.57
NPAS3-210ENST00000551492 RNF217Q8TC41 542 aa24.83■■□□□ 1.57
NPAS3-210ENST00000551492 DRC1Q96MC2 740 aa24.83■■□□□ 1.57
NPAS3-210ENST00000551492 COL15A1P39059 1388 aa24.83■■□□□ 1.57
NPAS3-210ENST00000551492 THSD7AQ9UPZ6 1657 aa24.83■■□□□ 1.57
NPAS3-210ENST00000551492 CHAF1AQ13111 956 aaPredicted RBP24.83■■□□□ 1.57
NPAS3-210ENST00000551492 CCDC191Q8NCU4 936 aa24.83■■□□□ 1.57
NPAS3-210ENST00000551492 RILPL2Q969X0 211 aa24.83■■□□□ 1.57
NPAS3-210ENST00000551492 LCMT1Q9UIC8 334 aa24.83■■□□□ 1.57
NPAS3-210ENST00000551492 LAMB4A4D0S4 1761 aa24.83■■□□□ 1.56
NPAS3-210ENST00000551492 PTPN12Q05209 780 aaKnown RBP24.82■■□□□ 1.56
NPAS3-210ENST00000551492 C3orf67Q6ZVT6 689 aa24.82■■□□□ 1.56
NPAS3-210ENST00000551492 GREM2Q9H772 168 aa24.82■■□□□ 1.56
NPAS3-210ENST00000551492 ZNF446Q9NWS9 450 aa24.82■■□□□ 1.56
NPAS3-210ENST00000551492 WTIPA6NIX2 430 aaPredicted RBP24.82■■□□□ 1.56
NPAS3-210ENST00000551492 FAM212AQ96EL1 285 aa24.82■■□□□ 1.56
NPAS3-210ENST00000551492 SEC31BQ9NQW1 1179 aa24.82■■□□□ 1.56
NPAS3-210ENST00000551492 PXDNLA1KZ92 1463 aa24.82■■□□□ 1.56
NPAS3-210ENST00000551492 IRS4O14654 1257 aaPredicted RBP24.81■■□□□ 1.56
NPAS3-210ENST00000551492 TFCP2Q12800 502 aa24.81■■□□□ 1.56
NPAS3-210ENST00000551492 G3BP1Q13283 466 aaKnown RBP eCLIP24.81■■□□□ 1.56
NPAS3-210ENST00000551492 EDC3Q96F86 508 aaKnown RBP24.81■■□□□ 1.56
NPAS3-210ENST00000551492 CHGBP05060 677 aa24.81■■□□□ 1.56
NPAS3-210ENST00000551492 GUCY2CP25092 1073 aa24.81■■□□□ 1.56
NPAS3-210ENST00000551492 CYP2C19P33261 490 aa24.81■■□□□ 1.56
NPAS3-210ENST00000551492 TIMM10P62072 90 aa24.81■■□□□ 1.56
NPAS3-210ENST00000551492 AACSQ86V21 672 aa24.81■■□□□ 1.56
NPAS3-210ENST00000551492 EAF2Q96CJ1 260 aaPredicted RBP24.81■■□□□ 1.56
NPAS3-210ENST00000551492 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.8■■□□□ 1.56
NPAS3-210ENST00000551492 PDE1AP54750 535 aa24.8■■□□□ 1.56
NPAS3-210ENST00000551492 SYT10Q6XYQ8 523 aa24.8■■□□□ 1.56
NPAS3-210ENST00000551492 AK7Q96M32 723 aa24.8■■□□□ 1.56
NPAS3-210ENST00000551492 EN1Q05925 392 aaPredicted RBP24.79■■□□□ 1.56
NPAS3-210ENST00000551492 SEMA3FQ13275 785 aa24.79■■□□□ 1.56
NPAS3-210ENST00000551492 TXNRD1Q16881 649 aa24.79■■□□□ 1.56
NPAS3-210ENST00000551492 DEFB132Q7Z7B7 95 aa24.79■■□□□ 1.56
NPAS3-210ENST00000551492 SNX21Q969T3 373 aa24.79■■□□□ 1.56
NPAS3-210ENST00000551492 RTCBQ9Y3I0 505 aaKnown RBP24.79■■□□□ 1.56
NPAS3-210ENST00000551492 UTYO14607 1347 aa24.79■■□□□ 1.56
NPAS3-210ENST00000551492 RFX5P48382 616 aaPredicted RBP24.78■■□□□ 1.56
NPAS3-210ENST00000551492 PKP1Q13835 747 aa24.78■■□□□ 1.56
NPAS3-210ENST00000551492 NEUROD6Q96NK8 337 aa24.78■■□□□ 1.56
NPAS3-210ENST00000551492 NPHP1O15259 732 aa24.77■■□□□ 1.56
NPAS3-210ENST00000551492 SDSP20132 328 aa24.77■■□□□ 1.56
NPAS3-210ENST00000551492 MSL1Q68DK7 614 aa24.77■■□□□ 1.56
NPAS3-210ENST00000551492 GOLIM4O00461 696 aa24.77■■□□□ 1.56
NPAS3-210ENST00000551492 MX1P20591 662 aa24.76■■□□□ 1.55
NPAS3-210ENST00000551492 ERFEQ4G0M1 354 aa24.76■■□□□ 1.55
NPAS3-210ENST00000551492 ZBTB38Q8NAP3 1195 aaPredicted RBP24.76■■□□□ 1.55
NPAS3-210ENST00000551492 NEK11Q8NG66 645 aa24.76■■□□□ 1.55
NPAS3-210ENST00000551492 PDGFDQ9GZP0 370 aaPredicted RBP24.76■■□□□ 1.55
NPAS3-210ENST00000551492 ZPR1O75312 459 aa24.76■■□□□ 1.55
NPAS3-210ENST00000551492 SATB1Q01826 763 aa24.76■■□□□ 1.55
NPAS3-210ENST00000551492 ZNF34Q8IZ26 560 aa24.76■■□□□ 1.55
NPAS3-210ENST00000551492 SH3BP1Q9Y3L3 701 aa24.76■■□□□ 1.55
NPAS3-210ENST00000551492 RFC4P35249 363 aa24.76■■□□□ 1.55
NPAS3-210ENST00000551492 PYCARDQ9ULZ3 195 aa24.76■■□□□ 1.55
NPAS3-210ENST00000551492 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.76■■□□□ 1.55
NPAS3-210ENST00000551492 USP25Q9UHP3 1055 aa24.75■■□□□ 1.55
NPAS3-210ENST00000551492 CASQ1P31415 396 aa24.75■■□□□ 1.55
NPAS3-210ENST00000551492 NUP98P52948 1817 aa24.75■■□□□ 1.55
NPAS3-210ENST00000551492 ZNF827Q17R98 1081 aa24.74■■□□□ 1.55
NPAS3-210ENST00000551492 SLFNL1Q499Z3 407 aa24.74■■□□□ 1.55
NPAS3-210ENST00000551492 CLEC17AQ6ZS10 378 aa24.74■■□□□ 1.55
NPAS3-210ENST00000551492 SBF2Q86WG5 1849 aa24.74■■□□□ 1.55
NPAS3-210ENST00000551492 MYO1CO00159 1063 aa24.74■■□□□ 1.55
NPAS3-210ENST00000551492 TTC22Q5TAA0 569 aa24.74■■□□□ 1.55
NPAS3-210ENST00000551492 ITGA6P23229 1130 aa24.73■■□□□ 1.55
NPAS3-210ENST00000551492 TTLL11Q8NHH1 800 aa24.73■■□□□ 1.55
NPAS3-210ENST00000551492 ZNF526Q8TF50 670 aaPredicted RBP24.73■■□□□ 1.55
NPAS3-210ENST00000551492 KIF1BPQ96EK5 621 aa24.73■■□□□ 1.55
NPAS3-210ENST00000551492 BOLA2Q9H3K6 86 aa24.73■■□□□ 1.55
NPAS3-210ENST00000551492 TFCP2L1Q9NZI6 479 aa24.73■■□□□ 1.55
NPAS3-210ENST00000551492 RPS6KA4O75676 772 aa24.73■■□□□ 1.55
NPAS3-210ENST00000551492 CCDC57Q2TAC2 916 aa24.73■■□□□ 1.55
NPAS3-210ENST00000551492 TSGA10IPQ3SY00 556 aa24.73■■□□□ 1.55
NPAS3-210ENST00000551492 TRAPPC3LQ5T215 181 aa24.73■■□□□ 1.55
NPAS3-210ENST00000551492 TBC1D9Q6ZT07 1266 aa24.73■■□□□ 1.55
NPAS3-210ENST00000551492 MTX1Q13505 466 aa24.72■■□□□ 1.55
NPAS3-210ENST00000551492 EZH2Q15910 746 aaKnown RBP24.72■■□□□ 1.55
NPAS3-210ENST00000551492 SGSM3Q96HU1 749 aa24.72■■□□□ 1.55
NPAS3-210ENST00000551492 TAF5LO75529 589 aa24.72■■□□□ 1.55
NPAS3-210ENST00000551492 PCCAP05165 728 aaPredicted RBP24.72■■□□□ 1.55
NPAS3-210ENST00000551492 E2F4Q16254 413 aa24.72■■□□□ 1.55
NPAS3-210ENST00000551492 KMT5BQ4FZB7 885 aa24.72■■□□□ 1.55
NPAS3-210ENST00000551492 NOL10Q9BSC4 688 aaKnown RBP24.72■■□□□ 1.55
NPAS3-210ENST00000551492 WWC3Q9ULE0 1092 aa24.71■■□□□ 1.55
NPAS3-210ENST00000551492 TAF1P21675 1872 aa24.71■■□□□ 1.55
NPAS3-210ENST00000551492 IFIT2P09913 472 aaKnown RBP24.71■■□□□ 1.55
NPAS3-210ENST00000551492 TICAM2Q86XR7 235 aa24.71■■□□□ 1.55
NPAS3-210ENST00000551492 CLASRPQ8N2M8 674 aaKnown RBP24.71■■□□□ 1.55
NPAS3-210ENST00000551492 DBNDD2Q9BQY9 259 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms