RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 SLC10A4Q96EP9 437 aa15.6■□□□□ 0.09
PTCH1-222ENST00000551425 OTUD5Q96G74 571 aa15.6■□□□□ 0.09
PTCH1-222ENST00000551425 TMEM106CQ9BVX2 250 aa15.6■□□□□ 0.09
PTCH1-222ENST00000551425 EFCC1Q9HA90 598 aa15.6■□□□□ 0.09
PTCH1-222ENST00000551425 ANGEL1Q9UNK9 670 aaKnown RBP15.6■□□□□ 0.09
PTCH1-222ENST00000551425 MYO3BQ8WXR4 1341 aa15.6■□□□□ 0.09
PTCH1-222ENST00000551425 MAP3K11Q16584 847 aa15.59■□□□□ 0.09
PTCH1-222ENST00000551425 ZBTB38Q8NAP3 1195 aaPredicted RBP15.59■□□□□ 0.09
PTCH1-222ENST00000551425 ZNF333Q96JL9 665 aa15.59■□□□□ 0.09
PTCH1-222ENST00000551425 UNCXA6NJT0 531 aa15.58■□□□□ 0.08
PTCH1-222ENST00000551425 CCDC152Q4G0S7 254 aa15.58■□□□□ 0.08
PTCH1-222ENST00000551425 STRIP1Q5VSL9 837 aa15.58■□□□□ 0.08
PTCH1-222ENST00000551425 WNK4Q96J92 1243 aa15.58■□□□□ 0.08
PTCH1-222ENST00000551425 MXD3Q9BW11 206 aa15.58■□□□□ 0.08
PTCH1-222ENST00000551425 COL1A1P02452 1464 aaPredicted RBP15.58■□□□□ 0.08
PTCH1-222ENST00000551425 BRCA2P51587 3418 aa15.58■□□□□ 0.08
PTCH1-222ENST00000551425 H0YGN5 161 aa15.57■□□□□ 0.08
PTCH1-222ENST00000551425 DLL1O00548 723 aa15.57■□□□□ 0.08
PTCH1-222ENST00000551425 SASH1O94885 1247 aa15.57■□□□□ 0.08
PTCH1-222ENST00000551425 RIPK4P57078 832 aa15.57■□□□□ 0.08
PTCH1-222ENST00000551425 SP3Q02447 781 aa15.57■□□□□ 0.08
PTCH1-222ENST00000551425 CRHR2Q13324 411 aa15.57■□□□□ 0.08
PTCH1-222ENST00000551425 OTUD7BQ6GQQ9 843 aa15.57■□□□□ 0.08
PTCH1-222ENST00000551425 ZBED3Q96IU2 234 aaPredicted RBP15.57■□□□□ 0.08
PTCH1-222ENST00000551425 DBF4Q9UBU7 674 aaPredicted RBP15.57■□□□□ 0.08
PTCH1-222ENST00000551425 MED23Q9ULK4 1368 aa15.57■□□□□ 0.08
PTCH1-222ENST00000551425 KRT24Q2M2I5 525 aa15.56■□□□□ 0.08
PTCH1-222ENST00000551425 HDGFL1Q5TGJ6 251 aa15.56■□□□□ 0.08
PTCH1-222ENST00000551425 ANKRD18AQ8IVF6 992 aa15.56■□□□□ 0.08
PTCH1-222ENST00000551425 TRIOBPQ9H2D6 2365 aa15.56■□□□□ 0.08
PTCH1-222ENST00000551425 SZT2Q5T011 3432 aa15.55■□□□□ 0.08
PTCH1-222ENST00000551425 LAMB1P07942 1786 aa15.55■□□□□ 0.08
PTCH1-222ENST00000551425 CHL1O00533 1208 aa15.55■□□□□ 0.08
PTCH1-222ENST00000551425 PDE8AO60658 829 aa15.55■□□□□ 0.08
PTCH1-222ENST00000551425 HOXB7P09629 217 aa15.55■□□□□ 0.08
PTCH1-222ENST00000551425 CAP1Q01518 475 aa15.55■□□□□ 0.08
PTCH1-222ENST00000551425 LMOD3Q0VAK6 560 aa15.55■□□□□ 0.08
PTCH1-222ENST00000551425 NBPF11Q86T75 865 aa15.55■□□□□ 0.08
PTCH1-222ENST00000551425 CLMNQ96JQ2 1002 aa15.55■□□□□ 0.08
PTCH1-222ENST00000551425 DEFB129Q9H1M3 183 aa15.55■□□□□ 0.08
PTCH1-222ENST00000551425 HYPKQ9NX55 129 aa15.55■□□□□ 0.08
PTCH1-222ENST00000551425 FZD1Q9UP38 647 aa15.55■□□□□ 0.08
PTCH1-222ENST00000551425 TESPA1A2RU30 521 aaPredicted RBP15.54■□□□□ 0.08
PTCH1-222ENST00000551425 WTIPA6NIX2 430 aaPredicted RBP15.54■□□□□ 0.08
PTCH1-222ENST00000551425 PPP1R12BO60237 982 aaPredicted RBP15.54■□□□□ 0.08
PTCH1-222ENST00000551425 COA1Q9GZY4 146 aa15.54■□□□□ 0.08
PTCH1-222ENST00000551425 SSC5DA1L4H1 1573 aa15.53■□□□□ 0.08
PTCH1-222ENST00000551425 ZNF646O15015 1829 aaPredicted RBP15.53■□□□□ 0.08
PTCH1-222ENST00000551425 PCCAP05165 728 aaPredicted RBP15.53■□□□□ 0.08
PTCH1-222ENST00000551425 ARHGEF6Q15052 776 aa15.53■□□□□ 0.08
PTCH1-222ENST00000551425 SLC9C1Q4G0N8 1177 aa15.53■□□□□ 0.08
PTCH1-222ENST00000551425 SLC17A8Q8NDX2 589 aa15.53■□□□□ 0.08
PTCH1-222ENST00000551425 PTPN18Q99952 460 aa15.53■□□□□ 0.08
PTCH1-222ENST00000551425 PPP2R3BQ9Y5P8 575 aa15.53■□□□□ 0.08
PTCH1-222ENST00000551425 CEP290O15078 2479 aa15.53■□□□□ 0.08
PTCH1-222ENST00000551425 GJA5P36382 358 aa15.52■□□□□ 0.08
PTCH1-222ENST00000551425 TMPOP42166 694 aaKnown RBP15.52■□□□□ 0.08
PTCH1-222ENST00000551425 SLC4A8Q2Y0W8 1093 aa15.52■□□□□ 0.08
PTCH1-222ENST00000551425 CHRDL2Q6WN34 429 aa15.52■□□□□ 0.08
PTCH1-222ENST00000551425 CCDC191Q8NCU4 936 aa15.52■□□□□ 0.08
PTCH1-222ENST00000551425 CCER1Q8TC90 406 aaPredicted RBP15.52■□□□□ 0.08
PTCH1-222ENST00000551425 FBXW7Q969H0 707 aa15.52■□□□□ 0.08
PTCH1-222ENST00000551425 CCDC85AQ96PX6 553 aaPredicted RBP15.52■□□□□ 0.08
PTCH1-222ENST00000551425 MINPP1Q9UNW1 487 aa15.52■□□□□ 0.08
PTCH1-222ENST00000551425 CCT4P50991 539 aaKnown RBP15.51■□□□□ 0.07
PTCH1-222ENST00000551425 TTLL5Q6EMB2 1281 aa15.51■□□□□ 0.07
PTCH1-222ENST00000551425 RIC3Q7Z5B4 369 aa15.51■□□□□ 0.07
PTCH1-222ENST00000551425 KIAA0825Q8IV33 1275 aa15.51■□□□□ 0.07
PTCH1-222ENST00000551425 CDC5LQ99459 802 aaKnown RBP15.51■□□□□ 0.07
PTCH1-222ENST00000551425 BSDC1Q9NW68 430 aaPredicted RBP15.51■□□□□ 0.07
PTCH1-222ENST00000551425 RBM27Q9P2N5 1060 aaKnown RBP15.51■□□□□ 0.07
PTCH1-222ENST00000551425 PTCH2Q9Y6C5 1203 aa15.51■□□□□ 0.07
PTCH1-222ENST00000551425 SUPT20HL1Q3ZLR7 823 aa15.5■□□□□ 0.07
PTCH1-222ENST00000551425 MTMR14Q8NCE2 650 aa15.5■□□□□ 0.07
PTCH1-222ENST00000551425 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.5■□□□□ 0.07
PTCH1-222ENST00000551425 A0A0C4DFX4 3053 aa15.49■□□□□ 0.07
PTCH1-222ENST00000551425 IREB2P48200 963 aaKnown RBP15.49■□□□□ 0.07
PTCH1-222ENST00000551425 GOLGA2Q08379 1002 aa15.49■□□□□ 0.07
PTCH1-222ENST00000551425 DLGAP5Q15398 846 aa15.49■□□□□ 0.07
PTCH1-222ENST00000551425 TXNRD3Q86VQ6 643 aa15.49■□□□□ 0.07
PTCH1-222ENST00000551425 LEMD3Q9Y2U8 911 aa15.49■□□□□ 0.07
PTCH1-222ENST00000551425 RANBP2P49792 3224 aaKnown RBP15.49■□□□□ 0.07
PTCH1-222ENST00000551425 ZNF804BA4D1E1 1349 aa15.48■□□□□ 0.07
PTCH1-222ENST00000551425 USP2O75604 605 aaPredicted RBP15.48■□□□□ 0.07
PTCH1-222ENST00000551425 CTSWP56202 376 aa15.48■□□□□ 0.07
PTCH1-222ENST00000551425 ANKRD13AQ8IZ07 590 aa15.48■□□□□ 0.07
PTCH1-222ENST00000551425 MYD88Q99836 296 aa15.48■□□□□ 0.07
PTCH1-222ENST00000551425 PRO3102Q9H379 93 aa15.48■□□□□ 0.07
PTCH1-222ENST00000551425 CWC25Q9NXE8 425 aaPredicted RBP15.48■□□□□ 0.07
PTCH1-222ENST00000551425 GTF2IP78347 998 aa15.47■□□□□ 0.07
PTCH1-222ENST00000551425 JARID2Q92833 1246 aaPredicted RBP15.47■□□□□ 0.07
PTCH1-222ENST00000551425 MS4A4AQ96JQ5 239 aa15.47■□□□□ 0.07
PTCH1-222ENST00000551425 NBPF12Q5TAG4 269 aaPredicted RBP15.46■□□□□ 0.07
PTCH1-222ENST00000551425 DUSP27Q5VZP5 1158 aa15.46■□□□□ 0.07
PTCH1-222ENST00000551425 TTLL11Q8NHH1 800 aa15.46■□□□□ 0.07
PTCH1-222ENST00000551425 ZFYVE28Q9HCC9 887 aa15.46■□□□□ 0.07
PTCH1-222ENST00000551425 LAS1LQ9Y4W2 734 aaKnown RBP15.46■□□□□ 0.07
PTCH1-222ENST00000551425 TAF1CQ15572 869 aaPredicted RBP15.45■□□□□ 0.06
PTCH1-222ENST00000551425 SH3TC2Q8TF17 1288 aa15.45■□□□□ 0.06
PTCH1-222ENST00000551425 BRI3BPQ8WY22 251 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms