RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 TRIP4Q15650 581 aaPredicted RBP6.2□□□□□ -1.42
SCAF11-215ENST00000551391 DCAF11Q8TEB1 546 aa6.2□□□□□ -1.42
SCAF11-215ENST00000551391 MEGF10Q96KG7 1140 aa6.2□□□□□ -1.42
SCAF11-215ENST00000551391 ASB16Q96NS5 453 aa6.2□□□□□ -1.42
SCAF11-215ENST00000551391 GGNBP2Q9H3C7 697 aa6.2□□□□□ -1.42
SCAF11-215ENST00000551391 XYLBO75191 536 aa6.19□□□□□ -1.42
SCAF11-215ENST00000551391 GHRHP01286 108 aa6.19□□□□□ -1.42
SCAF11-215ENST00000551391 IGHA2P01877 340 aa6.19□□□□□ -1.42
SCAF11-215ENST00000551391 PSAPP07602 524 aa6.19□□□□□ -1.42
SCAF11-215ENST00000551391 MAPK1P28482 360 aa6.19□□□□□ -1.42
SCAF11-215ENST00000551391 PLAURQ03405 335 aa6.19□□□□□ -1.42
SCAF11-215ENST00000551391 GDF6Q6KF10 455 aaPredicted RBP6.19□□□□□ -1.42
SCAF11-215ENST00000551391 DNAJC14Q6Y2X3 702 aaPredicted RBP6.19□□□□□ -1.42
SCAF11-215ENST00000551391 ZSCAN29Q8IWY8 852 aaPredicted RBP6.19□□□□□ -1.42
SCAF11-215ENST00000551391 TTC16Q8NEE8 873 aa6.19□□□□□ -1.42
SCAF11-215ENST00000551391 DMRTB1Q96MA1 342 aa6.19□□□□□ -1.42
SCAF11-215ENST00000551391 MRPL18Q9H0U6 180 aaKnown RBP6.19□□□□□ -1.42
SCAF11-215ENST00000551391 TLR7Q9NYK1 1049 aaKnown RBP6.19□□□□□ -1.42
SCAF11-215ENST00000551391 USP20Q9Y2K6 914 aa6.19□□□□□ -1.42
SCAF11-215ENST00000551391 UBAP1LF5GYI3 381 aa6.18□□□□□ -1.42
SCAF11-215ENST00000551391 DLL1O00548 723 aa6.18□□□□□ -1.42
SCAF11-215ENST00000551391 DEAF1O75398 565 aaPredicted RBP6.18□□□□□ -1.42
SCAF11-215ENST00000551391 LCE3BQ5TA77 95 aa6.18□□□□□ -1.42
SCAF11-215ENST00000551391 NLRP13Q86W25 1043 aa6.18□□□□□ -1.42
SCAF11-215ENST00000551391 IL22RA1Q8N6P7 574 aa6.18□□□□□ -1.42
SCAF11-215ENST00000551391 ALKBH8Q96BT7 664 aaKnown RBP6.18□□□□□ -1.42
SCAF11-215ENST00000551391 PLD4Q96BZ4 506 aa6.18□□□□□ -1.42
SCAF11-215ENST00000551391 LOC102724428A0A0B4J2F2 783 aa6.17□□□□□ -1.42
SCAF11-215ENST00000551391 FSTP19883 344 aa6.17□□□□□ -1.42
SCAF11-215ENST00000551391 MFAP1P55081 439 aaKnown RBP6.17□□□□□ -1.42
SCAF11-215ENST00000551391 SIK1P57059 783 aa6.17□□□□□ -1.42
SCAF11-215ENST00000551391 COL19A1Q14993 1142 aa6.17□□□□□ -1.42
SCAF11-215ENST00000551391 C8orf34Q49A92 452 aa6.17□□□□□ -1.42
SCAF11-215ENST00000551391 TMC7Q7Z402 723 aa6.17□□□□□ -1.42
SCAF11-215ENST00000551391 DZIP1LQ8IYY4 767 aaKnown RBP6.17□□□□□ -1.42
SCAF11-215ENST00000551391 TMEM130Q8N3G9 435 aa6.17□□□□□ -1.42
SCAF11-215ENST00000551391 SRA1Q9HD15 236 aaKnown RBP6.17□□□□□ -1.42
SCAF11-215ENST00000551391 J3QW42 95 aa6.16□□□□□ -1.42
SCAF11-215ENST00000551391 TREHO43280 583 aa6.16□□□□□ -1.42
SCAF11-215ENST00000551391 ALX3O95076 343 aa6.16□□□□□ -1.42
SCAF11-215ENST00000551391 NEFLP07196 543 aa6.16□□□□□ -1.42
SCAF11-215ENST00000551391 SSTR4P31391 388 aa6.16□□□□□ -1.42
SCAF11-215ENST00000551391 DSC3Q14574 896 aa6.16□□□□□ -1.42
SCAF11-215ENST00000551391 MAP4K3Q8IVH8 894 aa6.16□□□□□ -1.42
SCAF11-215ENST00000551391 ELP3Q9H9T3 547 aa6.16□□□□□ -1.42
SCAF11-215ENST00000551391 PODXL2Q9NZ53 605 aa6.16□□□□□ -1.42
SCAF11-215ENST00000551391 F8W735 103 aaPredicted RBP6.15□□□□□ -1.42
SCAF11-215ENST00000551391 PAX4O43316 350 aa6.15□□□□□ -1.42
SCAF11-215ENST00000551391 HOXD8P13378 290 aaPredicted RBP6.15□□□□□ -1.42
SCAF11-215ENST00000551391 GLB1P16278 677 aa6.15□□□□□ -1.42
SCAF11-215ENST00000551391 MCTP1Q6DN14 999 aa6.15□□□□□ -1.42
SCAF11-215ENST00000551391 ZNF438Q7Z4V0 828 aa6.15□□□□□ -1.42
SCAF11-215ENST00000551391 CACTIN-AS1Q8N1I8 211 aa6.15□□□□□ -1.42
SCAF11-215ENST00000551391 TMC1Q8TDI8 760 aa6.15□□□□□ -1.42
SCAF11-215ENST00000551391 KRTAP4-12Q9BQ66 201 aa6.15□□□□□ -1.42
SCAF11-215ENST00000551391 MUC3BQ9H195 1237 aa6.15□□□□□ -1.42
SCAF11-215ENST00000551391 ABI2Q9NYB9 513 aaPredicted RBP6.15□□□□□ -1.42
SCAF11-215ENST00000551391 CCDC9Q9Y3X0 531 aaKnown RBP6.15□□□□□ -1.42
SCAF11-215ENST00000551391 ANKRD33BA6NCL7 494 aa6.14□□□□□ -1.43
SCAF11-215ENST00000551391 BTBD11A6QL63 1104 aa6.14□□□□□ -1.43
SCAF11-215ENST00000551391 GPR182O15218 404 aa6.14□□□□□ -1.43
SCAF11-215ENST00000551391 GSC2O15499 205 aa6.14□□□□□ -1.43
SCAF11-215ENST00000551391 TNFRSF21O75509 655 aa6.14□□□□□ -1.43
SCAF11-215ENST00000551391 SOX18P35713 384 aa6.14□□□□□ -1.43
SCAF11-215ENST00000551391 PLCB3Q01970 1234 aa6.14□□□□□ -1.43
SCAF11-215ENST00000551391 PMEPA1Q969W9 287 aa6.14□□□□□ -1.43
SCAF11-215ENST00000551391 NSUN5Q96P11 429 aaKnown RBP6.14□□□□□ -1.43
SCAF11-215ENST00000551391 GOLGA2P5Q9HBQ8 144 aa6.14□□□□□ -1.43
SCAF11-215ENST00000551391 A6NHS1 94 aa6.13□□□□□ -1.43
SCAF11-215ENST00000551391 MMP20O60882 483 aa6.13□□□□□ -1.43
SCAF11-215ENST00000551391 TTC39BQ5VTQ0 682 aaPredicted RBP6.13□□□□□ -1.43
SCAF11-215ENST00000551391 OR13H1Q8NG92 308 aa6.13□□□□□ -1.43
SCAF11-215ENST00000551391 SNX29Q8TEQ0 813 aa6.13□□□□□ -1.43
SCAF11-215ENST00000551391 NIF3L1Q9GZT8 377 aa6.13□□□□□ -1.43
SCAF11-215ENST00000551391 DNAJC25Q9H1X3 360 aa6.13□□□□□ -1.43
SCAF11-215ENST00000551391 TMEM63CQ9P1W3 806 aa6.13□□□□□ -1.43
SCAF11-215ENST00000551391 STOML1Q9UBI4 398 aa6.13□□□□□ -1.43
SCAF11-215ENST00000551391 RAXQ9Y2V3 346 aa6.13□□□□□ -1.43
SCAF11-215ENST00000551391 IRAK1P51617 712 aa6.12□□□□□ -1.43
SCAF11-215ENST00000551391 FMR1Q06787 632 aaKnown RBP eCLIP6.12□□□□□ -1.43
SCAF11-215ENST00000551391 SETDB1Q15047 1291 aa6.12□□□□□ -1.43
SCAF11-215ENST00000551391 NPAS4Q8IUM7 802 aa6.12□□□□□ -1.43
SCAF11-215ENST00000551391 COL17A1Q9UMD9 1497 aaPredicted RBP6.11□□□□□ -1.43
SCAF11-215ENST00000551391 DHX15O43143 795 aaKnown RBP6.11□□□□□ -1.43
SCAF11-215ENST00000551391 COBLO75128 1261 aa6.11□□□□□ -1.43
SCAF11-215ENST00000551391 IGLV1-40P01703 118 aa6.11□□□□□ -1.43
SCAF11-215ENST00000551391 TXKP42681 527 aa6.11□□□□□ -1.43
SCAF11-215ENST00000551391 C1orf127Q8N9H9 656 aa6.11□□□□□ -1.43
SCAF11-215ENST00000551391 SPACA7Q96KW9 195 aa6.11□□□□□ -1.43
SCAF11-215ENST00000551391 CHRDQ9H2X0 955 aa6.11□□□□□ -1.43
SCAF11-215ENST00000551391 ZFYVE28Q9HCC9 887 aa6.11□□□□□ -1.43
SCAF11-215ENST00000551391 CNTN3Q9P232 1028 aa6.11□□□□□ -1.43
SCAF11-215ENST00000551391 TRIM33Q9UPN9 1127 aa6.11□□□□□ -1.43
SCAF11-215ENST00000551391 PPME1Q9Y570 386 aa6.11□□□□□ -1.43
SCAF11-215ENST00000551391 CPNE3O75131 537 aaKnown RBP6.1□□□□□ -1.43
SCAF11-215ENST00000551391 PHACTR2O75167 634 aa6.1□□□□□ -1.43
SCAF11-215ENST00000551391 KIF4AO95239 1232 aa6.1□□□□□ -1.43
SCAF11-215ENST00000551391 CD97P48960 835 aa6.1□□□□□ -1.43
SCAF11-215ENST00000551391 ENOX2Q16206 610 aaKnown RBP6.1□□□□□ -1.43
SCAF11-215ENST00000551391 AGGF1Q8N302 714 aaeCLIP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms