RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, human

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5C-208	ENST00000551338	PI16	Q6UXB8	463 aa		13.77	□□□□□ -0.21
RAB5C-208	ENST00000551338	ZSCAN31	Q96LW9	406 aa	Predicted RBP	13.77	□□□□□ -0.21
RAB5C-208	ENST00000551338	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	13.77	□□□□□ -0.21
RAB5C-208	ENST00000551338	SEC31B	Q9NQW1	1179 aa		13.77	□□□□□ -0.21
RAB5C-208	ENST00000551338	RPS6KA4	O75676	772 aa		13.76	□□□□□ -0.21
RAB5C-208	ENST00000551338	CYP21A2	P08686	494 aa		13.76	□□□□□ -0.21
RAB5C-208	ENST00000551338	ARID4A	P29374	1257 aa	Predicted RBP	13.76	□□□□□ -0.21
RAB5C-208	ENST00000551338	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.76	□□□□□ -0.21
RAB5C-208	ENST00000551338	KRT32	Q14532	448 aa		13.76	□□□□□ -0.21
RAB5C-208	ENST00000551338	CCDC152	Q4G0S7	254 aa		13.76	□□□□□ -0.21
RAB5C-208	ENST00000551338	GOLGA6L22	H0YM25	854 aa		13.75	□□□□□ -0.21
RAB5C-208	ENST00000551338	ZFY	P08048	801 aa	Predicted RBP	13.75	□□□□□ -0.21
RAB5C-208	ENST00000551338	HSP90B1	P14625	803 aa	Known RBP	13.75	□□□□□ -0.21
RAB5C-208	ENST00000551338	PHKA1	P46020	1223 aa		13.75	□□□□□ -0.21
RAB5C-208	ENST00000551338	TOB2	Q14106	344 aa	Predicted RBP	13.75	□□□□□ -0.21
RAB5C-208	ENST00000551338	PUM3	Q15397	648 aa	Known RBP	13.75	□□□□□ -0.21
RAB5C-208	ENST00000551338	ERFE	Q4G0M1	354 aa		13.75	□□□□□ -0.21
RAB5C-208	ENST00000551338	STOX1	Q6ZVD7	989 aa		13.75	□□□□□ -0.21
RAB5C-208	ENST00000551338	SMIM5	Q71RC9	77 aa		13.75	□□□□□ -0.21
RAB5C-208	ENST00000551338	CCDC83	Q8IWF9	413 aa		13.75	□□□□□ -0.21
RAB5C-208	ENST00000551338	HELB	Q8NG08	1087 aa	Predicted RBP	13.75	□□□□□ -0.21
RAB5C-208	ENST00000551338	APPBP2	Q92624	585 aa		13.75	□□□□□ -0.21
RAB5C-208	ENST00000551338	OSBP2	Q969R2	916 aa		13.75	□□□□□ -0.21
RAB5C-208	ENST00000551338	SH2B1	Q9NRF2	756 aa	Predicted RBP	13.75	□□□□□ -0.21
RAB5C-208	ENST00000551338	NARF	Q9UHQ1	456 aa		13.75	□□□□□ -0.21
RAB5C-208	ENST00000551338	MAST2	Q6P0Q8	1798 aa		13.75	□□□□□ -0.21
RAB5C-208	ENST00000551338	TIAM2	Q8IVF5	1701 aa		13.74	□□□□□ -0.21
RAB5C-208	ENST00000551338	FOXP2	O15409	715 aa		13.74	□□□□□ -0.21
RAB5C-208	ENST00000551338	ONECUT3	O60422	494 aa	Predicted RBP	13.74	□□□□□ -0.21
RAB5C-208	ENST00000551338	HSPD1	P10809	573 aa	Known RBP	13.74	□□□□□ -0.21
RAB5C-208	ENST00000551338	SLC5A1	P13866	664 aa		13.74	□□□□□ -0.21
RAB5C-208	ENST00000551338	ME3	Q16798	604 aa		13.74	□□□□□ -0.21
RAB5C-208	ENST00000551338	SKOR2	Q2VWA4	1001 aa	Predicted RBP	13.74	□□□□□ -0.21
RAB5C-208	ENST00000551338	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.74	□□□□□ -0.21
RAB5C-208	ENST00000551338	TBC1D9B	Q66K14	1250 aa		13.74	□□□□□ -0.21
RAB5C-208	ENST00000551338	CCDC102B	Q68D86	513 aa		13.74	□□□□□ -0.21
RAB5C-208	ENST00000551338	MCTP1	Q6DN14	999 aa		13.74	□□□□□ -0.21
RAB5C-208	ENST00000551338	C3orf67	Q6ZVT6	689 aa		13.74	□□□□□ -0.21
RAB5C-208	ENST00000551338	LPIN2	Q92539	896 aa		13.74	□□□□□ -0.21
RAB5C-208	ENST00000551338	TCEANC2	Q96MN5	208 aa		13.74	□□□□□ -0.21
RAB5C-208	ENST00000551338	NEK1	Q96PY6	1258 aa		13.74	□□□□□ -0.21
RAB5C-208	ENST00000551338	SRP68	Q9UHB9	627 aa	Known RBP	13.74	□□□□□ -0.21
RAB5C-208	ENST00000551338	CCNL1	Q9UK58	526 aa	Predicted RBP	13.74	□□□□□ -0.21
RAB5C-208	ENST00000551338	TPCN1	Q9ULQ1	816 aa		13.74	□□□□□ -0.21
RAB5C-208	ENST00000551338	ECM29	Q5VYK3	1845 aa		13.74	□□□□□ -0.21
RAB5C-208	ENST00000551338	KIAA1551	Q9HCM1	1747 aa		13.73	□□□□□ -0.21
RAB5C-208	ENST00000551338		A0A0G2JLW4	131 aa		13.73	□□□□□ -0.21
RAB5C-208	ENST00000551338	UQCRFS1P1	P0C7P4	283 aa		13.73	□□□□□ -0.21
RAB5C-208	ENST00000551338	ADD2	P35612	726 aa		13.73	□□□□□ -0.21
RAB5C-208	ENST00000551338	IGHMBP2	P38935	993 aa	Known RBP	13.73	□□□□□ -0.21
RAB5C-208	ENST00000551338	SF3B3	Q15393	1217 aa	Known RBP	13.73	□□□□□ -0.21
RAB5C-208	ENST00000551338	FOXD4L5	Q5VV16	416 aa	Predicted RBP	13.73	□□□□□ -0.21
RAB5C-208	ENST00000551338	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	13.73	□□□□□ -0.21
RAB5C-208	ENST00000551338	CHAMP1	Q96JM3	812 aa		13.73	□□□□□ -0.21
RAB5C-208	ENST00000551338	PIH1D3	Q9NQM4	214 aa	Known RBP	13.73	□□□□□ -0.21
RAB5C-208	ENST00000551338	LMBRD1	Q9NUN5	540 aa		13.73	□□□□□ -0.21
RAB5C-208	ENST00000551338	TRPC5	Q9UL62	973 aa	Predicted RBP	13.73	□□□□□ -0.21
RAB5C-208	ENST00000551338	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	13.73	□□□□□ -0.21
RAB5C-208	ENST00000551338	CCDC88A	Q3V6T2	1871 aa		13.73	□□□□□ -0.21
RAB5C-208	ENST00000551338	CACNA1S	Q13698	1873 aa		13.72	□□□□□ -0.21
RAB5C-208	ENST00000551338	SNAP23	O00161	211 aa		13.72	□□□□□ -0.21
RAB5C-208	ENST00000551338	GNPAT	O15228	680 aa		13.72	□□□□□ -0.21
RAB5C-208	ENST00000551338	ANKRD1	Q15327	319 aa		13.72	□□□□□ -0.21
RAB5C-208	ENST00000551338	AMIGO3	Q86WK7	504 aa		13.72	□□□□□ -0.21
RAB5C-208	ENST00000551338	SEPT12	Q8IYM1	358 aa		13.72	□□□□□ -0.21
RAB5C-208	ENST00000551338	MPHOSPH8	Q99549	860 aa		13.72	□□□□□ -0.21
RAB5C-208	ENST00000551338	SMC3	Q9UQE7	1217 aa		13.72	□□□□□ -0.21
RAB5C-208	ENST00000551338	WDR33	Q9C0J8	1336 aa	Known RBP	13.71	□□□□□ -0.21
RAB5C-208	ENST00000551338	TTF1	Q15361	905 aa	Predicted RBP	13.71	□□□□□ -0.21
RAB5C-208	ENST00000551338	WASHC4	Q2M389	1173 aa		13.71	□□□□□ -0.21
RAB5C-208	ENST00000551338	SLC10A5	Q5PT55	438 aa		13.71	□□□□□ -0.21
RAB5C-208	ENST00000551338	BICDL1	Q6ZP65	573 aa		13.71	□□□□□ -0.21
RAB5C-208	ENST00000551338	NECAB1	Q8N987	351 aa		13.71	□□□□□ -0.21
RAB5C-208	ENST00000551338	CDC5L	Q99459	802 aa	Known RBP	13.71	□□□□□ -0.21
RAB5C-208	ENST00000551338	PUS7L	Q9H0K6	701 aa	Known RBP	13.71	□□□□□ -0.21
RAB5C-208	ENST00000551338	GZF1	Q9H116	711 aa	Predicted RBP	13.71	□□□□□ -0.21
RAB5C-208	ENST00000551338	FSD2	A1L4K1	749 aa		13.7	□□□□□ -0.22
RAB5C-208	ENST00000551338	GJB2	P29033	226 aa		13.7	□□□□□ -0.22
RAB5C-208	ENST00000551338	CHRND	Q07001	517 aa		13.7	□□□□□ -0.22
RAB5C-208	ENST00000551338	KLHL40	Q2TBA0	621 aa		13.7	□□□□□ -0.22
RAB5C-208	ENST00000551338	ZSCAN25	Q6NSZ9	544 aa		13.7	□□□□□ -0.22
RAB5C-208	ENST00000551338	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
RAB5C-208	ENST00000551338	RTCB	Q9Y3I0	505 aa	Known RBP	13.7	□□□□□ -0.22
RAB5C-208	ENST00000551338	COL1A1	P02452	1464 aa	Predicted RBP	13.69	□□□□□ -0.22
RAB5C-208	ENST00000551338	LAMB1	P07942	1786 aa		13.69	□□□□□ -0.22
RAB5C-208	ENST00000551338		E7EWF7	191 aa		13.69	□□□□□ -0.22
RAB5C-208	ENST00000551338	GPAA1	O43292	621 aa		13.69	□□□□□ -0.22
RAB5C-208	ENST00000551338	SYT1	P21579	422 aa		13.69	□□□□□ -0.22
RAB5C-208	ENST00000551338	RASGRF1	Q13972	1273 aa		13.69	□□□□□ -0.22
RAB5C-208	ENST00000551338	UBE3C	Q15386	1083 aa		13.69	□□□□□ -0.22
RAB5C-208	ENST00000551338	TTLL5	Q6EMB2	1281 aa		13.69	□□□□□ -0.22
RAB5C-208	ENST00000551338		Q6ZUG5	572 aa		13.69	□□□□□ -0.22
RAB5C-208	ENST00000551338	ARHGEF1	Q92888	912 aa	Known RBP	13.69	□□□□□ -0.22
RAB5C-208	ENST00000551338	WWC3	Q9ULE0	1092 aa		13.69	□□□□□ -0.22
RAB5C-208	ENST00000551338	TCRBV5S4A2T	A0A5A2	114 aa		13.68	□□□□□ -0.22
RAB5C-208	ENST00000551338	STX6	O43752	255 aa		13.68	□□□□□ -0.22
RAB5C-208	ENST00000551338	DTNB	O60941	627 aa		13.68	□□□□□ -0.22
RAB5C-208	ENST00000551338	ZSCAN22	P10073	491 aa	Predicted RBP	13.68	□□□□□ -0.22
RAB5C-208	ENST00000551338	PDE6A	P16499	860 aa		13.68	□□□□□ -0.22
RAB5C-208	ENST00000551338	EXOSC10	Q01780	885 aa	Known RBP	13.68	□□□□□ -0.22

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