RNA–Protein interactions for RNA: ENST00000550233.1

TMEM116-211, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 5

Gene TMEM116, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-211ENST00000550233 LIN7BQ9HAP6 207 aa6.73□□□□□ -1.33
TMEM116-211ENST00000550233 A0A1W2PNR3 127 aa6.72□□□□□ -1.33
TMEM116-211ENST00000550233 KCNQ4P56696 695 aa6.72□□□□□ -1.33
TMEM116-211ENST00000550233 CAMK2GQ13555 558 aaPredicted RBP6.72□□□□□ -1.33
TMEM116-211ENST00000550233 GRIN2CQ14957 1233 aa6.72□□□□□ -1.33
TMEM116-211ENST00000550233 RPS26P11Q5JNZ5 115 aaPredicted RBP6.72□□□□□ -1.33
TMEM116-211ENST00000550233 ZNF598Q86UK7 904 aaKnown RBP6.72□□□□□ -1.33
TMEM116-211ENST00000550233 NLRP8Q86W28 1048 aa6.72□□□□□ -1.33
TMEM116-211ENST00000550233 OR13H1Q8NG92 308 aa6.72□□□□□ -1.33
TMEM116-211ENST00000550233 HNRNPLLQ8WVV9 542 aaKnown RBP6.72□□□□□ -1.33
TMEM116-211ENST00000550233 CRBNQ96SW2 442 aa6.72□□□□□ -1.33
TMEM116-211ENST00000550233 CRISPLD1Q9H336 500 aa6.72□□□□□ -1.33
TMEM116-211ENST00000550233 ABCB6Q9NP58 842 aa6.72□□□□□ -1.33
TMEM116-211ENST00000550233 TIMMDC1Q9NPL8 285 aa6.72□□□□□ -1.33
TMEM116-211ENST00000550233 MSRB2Q9Y3D2 182 aa6.72□□□□□ -1.33
TMEM116-211ENST00000550233 TTC24A2A3L6 582 aaPredicted RBP6.71□□□□□ -1.34
TMEM116-211ENST00000550233 PF4P02776 101 aa6.71□□□□□ -1.34
TMEM116-211ENST00000550233 IMPDH2P12268 514 aa6.71□□□□□ -1.34
TMEM116-211ENST00000550233 LMNB1P20700 586 aa6.71□□□□□ -1.34
TMEM116-211ENST00000550233 GARTP22102 1010 aa6.71□□□□□ -1.34
TMEM116-211ENST00000550233 MSX1P28360 303 aa6.71□□□□□ -1.34
TMEM116-211ENST00000550233 EIF6P56537 245 aaKnown RBP6.71□□□□□ -1.34
TMEM116-211ENST00000550233 POU4F2Q12837 409 aa6.71□□□□□ -1.34
TMEM116-211ENST00000550233 ZNF697Q5TEC3 545 aa6.71□□□□□ -1.34
TMEM116-211ENST00000550233 PEAR1Q5VY43 1037 aaPredicted RBP6.71□□□□□ -1.34
TMEM116-211ENST00000550233 AGMOQ6ZNB7 445 aa6.71□□□□□ -1.34
TMEM116-211ENST00000550233 FAM196AQ6ZSG2 479 aa6.71□□□□□ -1.34
TMEM116-211ENST00000550233 LYSMD3Q7Z3D4 306 aa6.71□□□□□ -1.34
TMEM116-211ENST00000550233 CCNJLQ8IV13 435 aa6.71□□□□□ -1.34
TMEM116-211ENST00000550233 GOLM1Q8NBJ4 401 aa6.71□□□□□ -1.34
TMEM116-211ENST00000550233 SH3TC2Q8TF17 1288 aa6.71□□□□□ -1.34
TMEM116-211ENST00000550233 EMID1Q96A84 441 aaPredicted RBP6.71□□□□□ -1.34
TMEM116-211ENST00000550233 LRRC3Q9BY71 257 aa6.71□□□□□ -1.34
TMEM116-211ENST00000550233 PCGF6Q9BYE7 350 aa6.71□□□□□ -1.34
TMEM116-211ENST00000550233 BRD7Q9NPI1 651 aa6.71□□□□□ -1.34
TMEM116-211ENST00000550233 SALL4Q9UJQ4 1053 aa6.71□□□□□ -1.34
TMEM116-211ENST00000550233 KCNH4Q9UQ05 1017 aa6.71□□□□□ -1.34
TMEM116-211ENST00000550233 SAMM50Q9Y512 469 aa6.71□□□□□ -1.34
TMEM116-211ENST00000550233 SMAD7O15105 426 aaKnown RBP6.7□□□□□ -1.34
TMEM116-211ENST00000550233 EIF5BO60841 1220 aaKnown RBP6.7□□□□□ -1.34
TMEM116-211ENST00000550233 SOX18P35713 384 aa6.7□□□□□ -1.34
TMEM116-211ENST00000550233 CCINQ13939 588 aa6.7□□□□□ -1.34
TMEM116-211ENST00000550233 RASGRF1Q13972 1273 aa6.7□□□□□ -1.34
TMEM116-211ENST00000550233 MAP3K11Q16584 847 aa6.7□□□□□ -1.34
TMEM116-211ENST00000550233 PGBD3Q8N328 593 aa6.7□□□□□ -1.34
TMEM116-211ENST00000550233 SYNPOQ8N3V7 929 aa6.7□□□□□ -1.34
TMEM116-211ENST00000550233 SHDQ96IW2 340 aa6.7□□□□□ -1.34
TMEM116-211ENST00000550233 TRIM56Q9BRZ2 755 aaKnown RBP6.7□□□□□ -1.34
TMEM116-211ENST00000550233 TYW1Q9NV66 732 aaKnown RBP6.7□□□□□ -1.34
TMEM116-211ENST00000550233 FANCLQ9NW38 375 aa6.7□□□□□ -1.34
TMEM116-211ENST00000550233 UBP1Q9NZI7 540 aa6.7□□□□□ -1.34
TMEM116-211ENST00000550233 FAM221BA6H8Z2 402 aa6.69□□□□□ -1.34
TMEM116-211ENST00000550233 ITPKAP23677 461 aa6.69□□□□□ -1.34
TMEM116-211ENST00000550233 GRNP28799 593 aaKnown RBP6.69□□□□□ -1.34
TMEM116-211ENST00000550233 ZNF165P49910 485 aa6.69□□□□□ -1.34
TMEM116-211ENST00000550233 FAM160A1Q05DH4 1040 aa6.69□□□□□ -1.34
TMEM116-211ENST00000550233 HYAL2Q12891 473 aa6.69□□□□□ -1.34
TMEM116-211ENST00000550233 LBRQ14739 615 aaKnown RBP6.69□□□□□ -1.34
TMEM116-211ENST00000550233 CWF19L2Q2TBE0 894 aaKnown RBP6.69□□□□□ -1.34
TMEM116-211ENST00000550233 HSP90AB2PQ58FF8 381 aa6.69□□□□□ -1.34
TMEM116-211ENST00000550233 TPTE2Q6XPS3 522 aa6.69□□□□□ -1.34
TMEM116-211ENST00000550233 C16orf86Q6ZW13 317 aa6.69□□□□□ -1.34
TMEM116-211ENST00000550233 KIAA0907Q7Z7F0 614 aaPredicted RBP6.69□□□□□ -1.34
TMEM116-211ENST00000550233 TRIM42Q8IWZ5 723 aa6.69□□□□□ -1.34
TMEM116-211ENST00000550233 CYP4X1Q8N118 509 aa6.69□□□□□ -1.34
TMEM116-211ENST00000550233 LINC00528Q8N1L1 170 aa6.69□□□□□ -1.34
TMEM116-211ENST00000550233 KLRG1Q96E93 195 aa6.69□□□□□ -1.34
TMEM116-211ENST00000550233 TCF12Q99081 682 aa6.69□□□□□ -1.34
TMEM116-211ENST00000550233 LATS2Q9NRM7 1088 aa6.69□□□□□ -1.34
TMEM116-211ENST00000550233 ACTR10Q9NZ32 417 aa6.69□□□□□ -1.34
TMEM116-211ENST00000550233 PDPK1O15530 556 aa6.68□□□□□ -1.34
TMEM116-211ENST00000550233 PSAPP07602 524 aa6.68□□□□□ -1.34
TMEM116-211ENST00000550233 HOXD8P13378 290 aaPredicted RBP6.68□□□□□ -1.34
TMEM116-211ENST00000550233 GIPRP48546 466 aa6.68□□□□□ -1.34
TMEM116-211ENST00000550233 FOXC1Q12948 553 aa6.68□□□□□ -1.34
TMEM116-211ENST00000550233 FXNQ16595 210 aa6.68□□□□□ -1.34
TMEM116-211ENST00000550233 DDR2Q16832 855 aa6.68□□□□□ -1.34
TMEM116-211ENST00000550233 TTBK2Q6IQ55 1244 aa6.68□□□□□ -1.34
TMEM116-211ENST00000550233 FIGNL1Q6PIW4 674 aa6.68□□□□□ -1.34
TMEM116-211ENST00000550233 PRICKLE2Q7Z3G6 844 aa6.68□□□□□ -1.34
TMEM116-211ENST00000550233 NCAPG2Q86XI2 1143 aa6.68□□□□□ -1.34
TMEM116-211ENST00000550233 REXO1Q8N1G1 1221 aaKnown RBP6.68□□□□□ -1.34
TMEM116-211ENST00000550233 RNF217Q8TC41 542 aa6.68□□□□□ -1.34
TMEM116-211ENST00000550233 NECAB3Q96P71 396 aaPredicted RBP6.68□□□□□ -1.34
TMEM116-211ENST00000550233 FERD3LQ96RJ6 166 aa6.68□□□□□ -1.34
TMEM116-211ENST00000550233 FEZ1Q99689 392 aa6.68□□□□□ -1.34
TMEM116-211ENST00000550233 PKD2L1Q9P0L9 805 aa6.68□□□□□ -1.34
TMEM116-211ENST00000550233 KLHL42Q9P2K6 505 aa6.68□□□□□ -1.34
TMEM116-211ENST00000550233 KANSL3Q9P2N6 904 aa6.68□□□□□ -1.34
TMEM116-211ENST00000550233 F6X3S4 739 aa6.67□□□□□ -1.34
TMEM116-211ENST00000550233 SASH3O75995 380 aa6.67□□□□□ -1.34
TMEM116-211ENST00000550233 KIF4AO95239 1232 aa6.67□□□□□ -1.34
TMEM116-211ENST00000550233 CTSOP43234 321 aaPredicted RBP6.67□□□□□ -1.34
TMEM116-211ENST00000550233 MPP2Q14168 576 aa6.67□□□□□ -1.34
TMEM116-211ENST00000550233 SEZ6Q53EL9 994 aa6.67□□□□□ -1.34
TMEM116-211ENST00000550233 TRERF1Q96PN7 1200 aa6.67□□□□□ -1.34
TMEM116-211ENST00000550233 DNAJC7Q99615 494 aa6.67□□□□□ -1.34
TMEM116-211ENST00000550233 OSMRQ99650 979 aa6.67□□□□□ -1.34
TMEM116-211ENST00000550233 MIR1-1HGQ9H1L0 117 aa6.67□□□□□ -1.34
TMEM116-211ENST00000550233 TMEM260Q9NX78 707 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms