RNA–Protein interactions for RNA: ENST00000549727.1

ATP2B1-206, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 2

Gene ATP2B1, Length 1,430 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-206ENST00000549727 LRP8Q14114 963 aa8.46□□□□□ -1.05
ATP2B1-206ENST00000549727 CCDC82Q8N4S0 544 aa8.46□□□□□ -1.05
ATP2B1-206ENST00000549727 HELQQ8TDG4 1101 aa8.46□□□□□ -1.05
ATP2B1-206ENST00000549727 KLHDC7BQ96G42 594 aa8.46□□□□□ -1.05
ATP2B1-206ENST00000549727 KRTAP9-2Q9BYQ4 174 aa8.46□□□□□ -1.05
ATP2B1-206ENST00000549727 PDGFAP04085 211 aa8.46□□□□□ -1.06
ATP2B1-206ENST00000549727 SSFA2P28290 1259 aa8.46□□□□□ -1.06
ATP2B1-206ENST00000549727 CD68P34810 354 aaPredicted RBP8.46□□□□□ -1.06
ATP2B1-206ENST00000549727 DNM1Q05193 864 aaKnown RBP8.46□□□□□ -1.06
ATP2B1-206ENST00000549727 HGSNATQ68CP4 663 aa8.46□□□□□ -1.06
ATP2B1-206ENST00000549727 PDE12Q6L8Q7 609 aaKnown RBP8.46□□□□□ -1.06
ATP2B1-206ENST00000549727 ARMC10Q8N2F6 343 aa8.46□□□□□ -1.06
ATP2B1-206ENST00000549727 SPACA7Q96KW9 195 aa8.46□□□□□ -1.06
ATP2B1-206ENST00000549727 CHRDQ9H2X0 955 aa8.46□□□□□ -1.06
ATP2B1-206ENST00000549727 SRA1Q9HD15 236 aaKnown RBP8.46□□□□□ -1.06
ATP2B1-206ENST00000549727 FSCN2O14926 492 aa8.45□□□□□ -1.06
ATP2B1-206ENST00000549727 SMNDC1O75940 238 aaKnown RBP eCLIP8.45□□□□□ -1.06
ATP2B1-206ENST00000549727 GLB1P16278 677 aa8.45□□□□□ -1.06
ATP2B1-206ENST00000549727 MPSTP25325 297 aa8.45□□□□□ -1.06
ATP2B1-206ENST00000549727 EIF1AXP47813 144 aaKnown RBP8.45□□□□□ -1.06
ATP2B1-206ENST00000549727 PHLDB3Q6NSJ2 640 aa8.45□□□□□ -1.06
ATP2B1-206ENST00000549727 XKR5Q6UX68 686 aa8.45□□□□□ -1.06
ATP2B1-206ENST00000549727 KIAA1211Q6ZU35 1233 aa8.45□□□□□ -1.06
ATP2B1-206ENST00000549727 ZNF438Q7Z4V0 828 aa8.45□□□□□ -1.06
ATP2B1-206ENST00000549727 NCAPG2Q86XI2 1143 aa8.45□□□□□ -1.06
ATP2B1-206ENST00000549727 MAP4K3Q8IVH8 894 aa8.45□□□□□ -1.06
ATP2B1-206ENST00000549727 GTF3C2Q8WUA4 911 aaPredicted RBP8.45□□□□□ -1.06
ATP2B1-206ENST00000549727 FOXD4L4Q8WXT5 416 aaPredicted RBP8.45□□□□□ -1.06
ATP2B1-206ENST00000549727 NOM1Q5C9Z4 860 aaKnown RBP8.44□□□□□ -1.06
ATP2B1-206ENST00000549727 CACTIN-AS1Q8N1I8 211 aa8.44□□□□□ -1.06
ATP2B1-206ENST00000549727 ADAM19Q9H013 955 aa8.44□□□□□ -1.06
ATP2B1-206ENST00000549727 MUC3BQ9H195 1237 aa8.44□□□□□ -1.06
ATP2B1-206ENST00000549727 RNF112Q9ULX5 631 aa8.44□□□□□ -1.06
ATP2B1-206ENST00000549727 KRTAP9-6A0A140TA67 174 aa8.43□□□□□ -1.06
ATP2B1-206ENST00000549727 FSTP19883 344 aa8.43□□□□□ -1.06
ATP2B1-206ENST00000549727 DZANK1Q9NVP4 752 aa8.43□□□□□ -1.06
ATP2B1-206ENST00000549727 C8orf34Q49A92 452 aa8.42□□□□□ -1.06
ATP2B1-206ENST00000549727 ACAD11Q709F0 780 aa8.42□□□□□ -1.06
ATP2B1-206ENST00000549727 UBASH3BQ8TF42 649 aa8.42□□□□□ -1.06
ATP2B1-206ENST00000549727 MED26O95402 600 aa8.41□□□□□ -1.06
ATP2B1-206ENST00000549727 POLIQ9UNA4 740 aa8.41□□□□□ -1.06
ATP2B1-206ENST00000549727 CES1P23141 567 aa8.4□□□□□ -1.06
ATP2B1-206ENST00000549727 MZF1P28698 734 aaPredicted RBP8.4□□□□□ -1.06
ATP2B1-206ENST00000549727 RAXQ9Y2V3 346 aa8.4□□□□□ -1.06
ATP2B1-206ENST00000549727 EREGO14944 169 aa8.39□□□□□ -1.07
ATP2B1-206ENST00000549727 TRIM26Q12899 539 aaPredicted RBP8.39□□□□□ -1.07
ATP2B1-206ENST00000549727 NBPF11Q86T75 865 aa8.39□□□□□ -1.07
ATP2B1-206ENST00000549727 NPR3P17342 541 aa8.38□□□□□ -1.07
ATP2B1-206ENST00000549727 PTPRAP18433 802 aa8.38□□□□□ -1.07
ATP2B1-206ENST00000549727 DUOXA2Q1HG44 320 aa8.38□□□□□ -1.07
ATP2B1-206ENST00000549727 FAM46AQ96IP4 442 aaKnown RBP8.38□□□□□ -1.07
ATP2B1-206ENST00000549727 SEC31BQ9NQW1 1179 aa8.38□□□□□ -1.07
ATP2B1-206ENST00000549727 FOXD3Q9UJU5 478 aaPredicted RBP8.38□□□□□ -1.07
ATP2B1-206ENST00000549727 FZD6O60353 706 aa8.37□□□□□ -1.07
ATP2B1-206ENST00000549727 SSTR4P31391 388 aa8.37□□□□□ -1.07
ATP2B1-206ENST00000549727 KLHL23Q8NBE8 558 aa8.37□□□□□ -1.07
ATP2B1-206ENST00000549727 ANO2Q9NQ90 1003 aa8.37□□□□□ -1.07
ATP2B1-206ENST00000549727 SOX13Q9UN79 622 aa8.37□□□□□ -1.07
ATP2B1-206ENST00000549727 H3BRJ5 948 aa8.37□□□□□ -1.07
ATP2B1-206ENST00000549727 PDE2AO00408 941 aaPredicted RBP8.37□□□□□ -1.07
ATP2B1-206ENST00000549727 NXPE3Q969Y0 559 aa8.37□□□□□ -1.07
ATP2B1-206ENST00000549727 LATS2Q9NRM7 1088 aa8.37□□□□□ -1.07
ATP2B1-206ENST00000549727 CCDC87Q9NVE4 849 aa8.37□□□□□ -1.07
ATP2B1-206ENST00000549727 HMX2A2RU54 273 aa8.36□□□□□ -1.07
ATP2B1-206ENST00000549727 SOX1O00570 391 aaPredicted RBP8.36□□□□□ -1.07
ATP2B1-206ENST00000549727 TNFRSF21O75509 655 aa8.36□□□□□ -1.07
ATP2B1-206ENST00000549727 TGFB1P01137 390 aa8.36□□□□□ -1.07
ATP2B1-206ENST00000549727 NLRP12P59046 1061 aa8.36□□□□□ -1.07
ATP2B1-206ENST00000549727 VN1R5Q7Z5H4 357 aa8.36□□□□□ -1.07
ATP2B1-206ENST00000549727 TRIM42Q8IWZ5 723 aa8.36□□□□□ -1.07
ATP2B1-206ENST00000549727 SLC7A3Q8WY07 619 aa8.36□□□□□ -1.07
ATP2B1-206ENST00000549727 ZKSCAN3Q9BRR0 538 aa8.36□□□□□ -1.07
ATP2B1-206ENST00000549727 STOML1Q9UBI4 398 aa8.36□□□□□ -1.07
ATP2B1-206ENST00000549727 IGLV1-40P01703 118 aa8.35□□□□□ -1.07
ATP2B1-206ENST00000549727 PEAR1Q5VY43 1037 aaPredicted RBP8.35□□□□□ -1.07
ATP2B1-206ENST00000549727 OSMRQ99650 979 aa8.35□□□□□ -1.07
ATP2B1-206ENST00000549727 PIP4K2BP78356 416 aa8.34□□□□□ -1.07
ATP2B1-206ENST00000549727 FAM117BQ6P1L5 589 aa8.34□□□□□ -1.07
ATP2B1-206ENST00000549727 TMEM102Q8N9M5 508 aaPredicted RBP8.34□□□□□ -1.07
ATP2B1-206ENST00000549727 DCAF11Q8TEB1 546 aa8.34□□□□□ -1.07
ATP2B1-206ENST00000549727 C7orf69Q9H7B7 122 aa8.34□□□□□ -1.07
ATP2B1-206ENST00000549727 DHX15O43143 795 aaKnown RBP8.33□□□□□ -1.08
ATP2B1-206ENST00000549727 ADAMTS4O75173 837 aa8.33□□□□□ -1.08
ATP2B1-206ENST00000549727 DLGAP3O95886 979 aa8.33□□□□□ -1.08
ATP2B1-206ENST00000549727 RPLP1P05386 114 aaKnown RBP8.33□□□□□ -1.08
ATP2B1-206ENST00000549727 PREPP48147 710 aa8.33□□□□□ -1.08
ATP2B1-206ENST00000549727 CD97P48960 835 aa8.33□□□□□ -1.08
ATP2B1-206ENST00000549727 ZNF211Q13398 564 aaPredicted RBP8.33□□□□□ -1.08
ATP2B1-206ENST00000549727 ECM1Q16610 540 aa8.33□□□□□ -1.08
ATP2B1-206ENST00000549727 ZDHHC13Q8IUH4 622 aa8.33□□□□□ -1.08
ATP2B1-206ENST00000549727 MYRFLQ96LU7 910 aa8.33□□□□□ -1.08
ATP2B1-206ENST00000549727 PCSK2P16519 638 aa8.32□□□□□ -1.08
ATP2B1-206ENST00000549727 SLC51AQ86UW1 340 aa8.32□□□□□ -1.08
ATP2B1-206ENST00000549727 UTP4Q969X6 686 aaKnown RBP8.32□□□□□ -1.08
ATP2B1-206ENST00000549727 OSGEPQ9NPF4 335 aa8.32□□□□□ -1.08
ATP2B1-206ENST00000549727 PRR19A6NJB7 356 aa8.31□□□□□ -1.08
ATP2B1-206ENST00000549727 METTL12A8MUP2 240 aa8.31□□□□□ -1.08
ATP2B1-206ENST00000549727 PPP1R15AO75807 674 aaPredicted RBP8.31□□□□□ -1.08
ATP2B1-206ENST00000549727 POLR3DP05423 398 aaPredicted RBP8.31□□□□□ -1.08
ATP2B1-206ENST00000549727 AAMPQ13685 434 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms