RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 FPGT-TNNI3KV9GXZ4 949 aa26.14■■□□□ 1.77
VPS29-206ENST00000549578 IRS2Q9Y4H2 1338 aa26.13■■□□□ 1.77
VPS29-206ENST00000549578 A0A1B0GUL7 405 aa26.13■■□□□ 1.77
VPS29-206ENST00000549578 PPIP5K2O43314 1243 aa26.13■■□□□ 1.77
VPS29-206ENST00000549578 IARSP41252 1262 aaKnown RBP26.13■■□□□ 1.77
VPS29-206ENST00000549578 SMC5Q8IY18 1101 aa26.13■■□□□ 1.77
VPS29-206ENST00000549578 MED23Q9ULK4 1368 aa26.13■■□□□ 1.77
VPS29-206ENST00000549578 IFIT1P09914 478 aaKnown RBP26.12■■□□□ 1.77
VPS29-206ENST00000549578 SLC5A1P13866 664 aa26.12■■□□□ 1.77
VPS29-206ENST00000549578 KIAA2012Q0VF49 1180 aa26.12■■□□□ 1.77
VPS29-206ENST00000549578 CCDC136Q96JN2 1154 aa26.12■■□□□ 1.77
VPS29-206ENST00000549578 ZC3H12CQ9C0D7 883 aaKnown RBP26.12■■□□□ 1.77
VPS29-206ENST00000549578 SBF1O95248 1867 aa26.11■■□□□ 1.77
VPS29-206ENST00000549578 CCDC88AQ3V6T2 1871 aa26.11■■□□□ 1.77
VPS29-206ENST00000549578 EAF2Q96CJ1 260 aaPredicted RBP26.11■■□□□ 1.77
VPS29-206ENST00000549578 NEUROD6Q96NK8 337 aa26.11■■□□□ 1.77
VPS29-206ENST00000549578 GPR108Q9NPR9 543 aa26.11■■□□□ 1.77
VPS29-206ENST00000549578 COL4A5P29400 1685 aa26.11■■□□□ 1.77
VPS29-206ENST00000549578 LMNB1P20700 586 aa26.1■■□□□ 1.77
VPS29-206ENST00000549578 ADORA1P30542 326 aa26.1■■□□□ 1.77
VPS29-206ENST00000549578 B4GALNT3Q6L9W6 998 aa26.1■■□□□ 1.77
VPS29-206ENST00000549578 LARGE2Q8N3Y3 721 aa26.1■■□□□ 1.77
VPS29-206ENST00000549578 PPP4R2Q9NY27 417 aa26.1■■□□□ 1.77
VPS29-206ENST00000549578 GYG1P46976 350 aa26.09■■□□□ 1.77
VPS29-206ENST00000549578 ANKRD45Q5TZF3 282 aa26.09■■□□□ 1.77
VPS29-206ENST00000549578 C15orf52Q6ZUT6 534 aaKnown RBP26.09■■□□□ 1.77
VPS29-206ENST00000549578 CLASRPQ8N2M8 674 aaKnown RBP26.09■■□□□ 1.77
VPS29-206ENST00000549578 ARAP2Q8WZ64 1704 aa26.09■■□□□ 1.77
VPS29-206ENST00000549578 DOK7Q18PE1 504 aa26.09■■□□□ 1.77
VPS29-206ENST00000549578 AACSQ86V21 672 aa26.09■■□□□ 1.77
VPS29-206ENST00000549578 CCDC8Q9H0W5 538 aaPredicted RBP26.09■■□□□ 1.77
VPS29-206ENST00000549578 VPS33BQ9H267 617 aa26.09■■□□□ 1.77
VPS29-206ENST00000549578 XAGE2Q96GT9 111 aa26.08■■□□□ 1.77
VPS29-206ENST00000549578 TLR7Q9NYK1 1049 aaKnown RBP26.08■■□□□ 1.77
VPS29-206ENST00000549578 FAM84BQ96KN1 310 aaPredicted RBP26.07■■□□□ 1.76
VPS29-206ENST00000549578 DBNDD2Q9BQY9 259 aa26.07■■□□□ 1.76
VPS29-206ENST00000549578 DBNDD1Q9H9R9 158 aa26.07■■□□□ 1.76
VPS29-206ENST00000549578 RNF181Q9P0P0 153 aa26.07■■□□□ 1.76
VPS29-206ENST00000549578 KDM2BQ8NHM5 1336 aa26.07■■□□□ 1.76
VPS29-206ENST00000549578 BCAMP50895 628 aa26.06■■□□□ 1.76
VPS29-206ENST00000549578 C9orf131Q5VYM1 1079 aa26.06■■□□□ 1.76
VPS29-206ENST00000549578 DBNLQ9UJU6 430 aaKnown RBP26.06■■□□□ 1.76
VPS29-206ENST00000549578 CAVIN4Q5BKX8 364 aa26.05■■□□□ 1.76
VPS29-206ENST00000549578 G3V3G9 751 aa26.04■■□□□ 1.76
VPS29-206ENST00000549578 HIBADHP31937 336 aaKnown RBP26.04■■□□□ 1.76
VPS29-206ENST00000549578 DCAF8Q5TAQ9 597 aa26.04■■□□□ 1.76
VPS29-206ENST00000549578 ZNF804AQ7Z570 1209 aa26.04■■□□□ 1.76
VPS29-206ENST00000549578 FBXO33Q7Z6M2 555 aa26.04■■□□□ 1.76
VPS29-206ENST00000549578 NIM1KQ8IY84 436 aa26.04■■□□□ 1.76
VPS29-206ENST00000549578 ZBTB47Q9UFB7 747 aaPredicted RBP26.04■■□□□ 1.76
VPS29-206ENST00000549578 DICER1Q9UPY3 1922 aaKnown RBP26.04■■□□□ 1.76
VPS29-206ENST00000549578 ECE2O60344 883 aa26.04■■□□□ 1.76
VPS29-206ENST00000549578 IFIT2P09913 472 aaKnown RBP26.04■■□□□ 1.76
VPS29-206ENST00000549578 NUCB1Q02818 461 aa26.04■■□□□ 1.76
VPS29-206ENST00000549578 CENPQQ7L2Z9 268 aaPredicted RBP26.04■■□□□ 1.76
VPS29-206ENST00000549578 VPS37DQ86XT2 251 aa26.04■■□□□ 1.76
VPS29-206ENST00000549578 JDP2Q8WYK2 163 aa26.04■■□□□ 1.76
VPS29-206ENST00000549578 LNPKQ9C0E8 428 aa26.04■■□□□ 1.76
VPS29-206ENST00000549578 COA1Q9GZY4 146 aa26.04■■□□□ 1.76
VPS29-206ENST00000549578 PHKA1P46020 1223 aa26.03■■□□□ 1.76
VPS29-206ENST00000549578 GORABQ5T7V8 394 aa26.03■■□□□ 1.76
VPS29-206ENST00000549578 CD209Q9NNX6 404 aa26.03■■□□□ 1.76
VPS29-206ENST00000549578 CCDC102BQ68D86 513 aa26.02■■□□□ 1.76
VPS29-206ENST00000549578 C16orf71Q8IYS4 520 aaPredicted RBP26.02■■□□□ 1.76
VPS29-206ENST00000549578 IQSEC3Q9UPP2 1182 aaPredicted RBP26.02■■□□□ 1.76
VPS29-206ENST00000549578 YDJCA8MPS7 323 aa26.01■■□□□ 1.75
VPS29-206ENST00000549578 CHD1LQ86WJ1 897 aa26.01■■□□□ 1.75
VPS29-206ENST00000549578 TIAM2Q8IVF5 1701 aa26.01■■□□□ 1.75
VPS29-206ENST00000549578 OTUD7AQ8TE49 926 aaPredicted RBP26■■□□□ 1.75
VPS29-206ENST00000549578 ZNRF3Q9ULT6 936 aa26■■□□□ 1.75
VPS29-206ENST00000549578 CHD4Q14839 1912 aa26■■□□□ 1.75
VPS29-206ENST00000549578 KCNQ5Q9NR82 932 aa25.99■■□□□ 1.75
VPS29-206ENST00000549578 SCN9AQ15858 1988 aa25.99■■□□□ 1.75
VPS29-206ENST00000549578 IL1R1P14778 569 aa25.98■■□□□ 1.75
VPS29-206ENST00000549578 PODNQ7Z5L7 613 aa25.98■■□□□ 1.75
VPS29-206ENST00000549578 TDRD7Q8NHU6 1098 aaKnown RBP25.98■■□□□ 1.75
VPS29-206ENST00000549578 FZD9O00144 591 aa25.97■■□□□ 1.75
VPS29-206ENST00000549578 CCDC158Q5M9N0 1113 aa25.97■■□□□ 1.75
VPS29-206ENST00000549578 TTC39AQ5SRH9 613 aa25.97■■□□□ 1.75
VPS29-206ENST00000549578 FRAT2O75474 233 aaPredicted RBP25.96■■□□□ 1.75
VPS29-206ENST00000549578 RAD17O75943 681 aa25.96■■□□□ 1.75
VPS29-206ENST00000549578 GNL3LQ9NVN8 582 aaKnown RBP25.96■■□□□ 1.75
VPS29-206ENST00000549578 JAG2Q9Y219 1238 aa25.96■■□□□ 1.75
VPS29-206ENST00000549578 GTF3C3Q9Y5Q9 886 aa25.96■■□□□ 1.75
VPS29-206ENST00000549578 ZNF541Q9H0D2 1346 aa25.95■■□□□ 1.75
VPS29-206ENST00000549578 COL1A1P02452 1464 aaPredicted RBP25.95■■□□□ 1.75
VPS29-206ENST00000549578 TSHZ3Q63HK5 1081 aa25.95■■□□□ 1.74
VPS29-206ENST00000549578 FBXW7Q969H0 707 aa25.95■■□□□ 1.74
VPS29-206ENST00000549578 ARID4AP29374 1257 aaPredicted RBP25.94■■□□□ 1.74
VPS29-206ENST00000549578 CXCL9Q07325 125 aa25.94■■□□□ 1.74
VPS29-206ENST00000549578 RASGRF1Q13972 1273 aa25.94■■□□□ 1.74
VPS29-206ENST00000549578 SCARF1Q14162 830 aa25.94■■□□□ 1.74
VPS29-206ENST00000549578 MYH13Q9UKX3 1938 aa25.94■■□□□ 1.74
VPS29-206ENST00000549578 EIF6P56537 245 aaKnown RBP25.93■■□□□ 1.74
VPS29-206ENST00000549578 GTF2IP78347 998 aa25.93■■□□□ 1.74
VPS29-206ENST00000549578 CHAF1AQ13111 956 aaPredicted RBP25.93■■□□□ 1.74
VPS29-206ENST00000549578 SALL3Q9BXA9 1300 aa25.93■■□□□ 1.74
VPS29-206ENST00000549578 UQCRFS1P1P0C7P4 283 aa25.93■■□□□ 1.74
VPS29-206ENST00000549578 MCAMP43121 646 aa25.93■■□□□ 1.74
VPS29-206ENST00000549578 PI16Q6UXB8 463 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms