RNA–Protein interactions for RNA: ENST00000549395.1

LETMD1-219, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 475 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-219ENST00000549395 AIMP1Q12904 312 aaKnown RBP9.98□□□□□ -0.81
LETMD1-219ENST00000549395 SF3B3Q15393 1217 aaKnown RBP9.98□□□□□ -0.81
LETMD1-219ENST00000549395 OTUD7BQ6GQQ9 843 aa9.98□□□□□ -0.81
LETMD1-219ENST00000549395 USP17L1Q7RTZ2 530 aa9.98□□□□□ -0.81
LETMD1-219ENST00000549395 SH3TC2Q8TF17 1288 aa9.98□□□□□ -0.81
LETMD1-219ENST00000549395 PODXL2Q9NZ53 605 aa9.98□□□□□ -0.81
LETMD1-219ENST00000549395 ANKIB1Q9P2G1 1089 aa9.98□□□□□ -0.81
LETMD1-219ENST00000549395 LAMA3Q16787 3333 aa9.97□□□□□ -0.81
LETMD1-219ENST00000549395 U2AF1L5P0DN76 240 aaPredicted RBP9.97□□□□□ -0.81
LETMD1-219ENST00000549395 RPS8P62241 208 aaKnown RBP9.97□□□□□ -0.81
LETMD1-219ENST00000549395 U2AF1Q01081 240 aaKnown RBP eCLIP9.97□□□□□ -0.81
LETMD1-219ENST00000549395 COPS6Q7L5N1 327 aa9.97□□□□□ -0.81
LETMD1-219ENST00000549395 SHISA4Q96DD7 197 aa9.97□□□□□ -0.81
LETMD1-219ENST00000549395 FAM89AQ96GI7 184 aa9.97□□□□□ -0.81
LETMD1-219ENST00000549395 PTPN18Q99952 460 aa9.97□□□□□ -0.81
LETMD1-219ENST00000549395 MXD3Q9BW11 206 aa9.97□□□□□ -0.81
LETMD1-219ENST00000549395 GGA1Q9UJY5 639 aa9.97□□□□□ -0.81
LETMD1-219ENST00000549395 RTL5Q5HYW3 569 aaPredicted RBP9.96□□□□□ -0.82
LETMD1-219ENST00000549395 OGFOD1Q8N543 542 aa9.96□□□□□ -0.82
LETMD1-219ENST00000549395 XAGE3Q8WTP9 111 aa9.96□□□□□ -0.82
LETMD1-219ENST00000549395 A0A1W2PPC1 479 aa9.95□□□□□ -0.82
LETMD1-219ENST00000549395 GJA5P36382 358 aa9.95□□□□□ -0.82
LETMD1-219ENST00000549395 ARHGEF6Q15052 776 aa9.95□□□□□ -0.82
LETMD1-219ENST00000549395 MAP3K11Q16584 847 aa9.95□□□□□ -0.82
LETMD1-219ENST00000549395 PODNQ7Z5L7 613 aa9.95□□□□□ -0.82
LETMD1-219ENST00000549395 APOBEC3FQ8IUX4 373 aaKnown RBP9.95□□□□□ -0.82
LETMD1-219ENST00000549395 FBXW7Q969H0 707 aa9.95□□□□□ -0.82
LETMD1-219ENST00000549395 CFAP53Q96M91 514 aa9.95□□□□□ -0.82
LETMD1-219ENST00000549395 HTATIP2Q9BUP3 242 aa9.95□□□□□ -0.82
LETMD1-219ENST00000549395 NUDCQ9Y266 331 aa9.95□□□□□ -0.82
LETMD1-219ENST00000549395 SSC5DA1L4H1 1573 aa9.94□□□□□ -0.82
LETMD1-219ENST00000549395 ZBTB7BO15156 539 aaPredicted RBP9.94□□□□□ -0.82
LETMD1-219ENST00000549395 MTFR1Q15390 333 aa9.94□□□□□ -0.82
LETMD1-219ENST00000549395 DACT2Q5SW24 774 aa9.94□□□□□ -0.82
LETMD1-219ENST00000549395 SEC31BQ9NQW1 1179 aa9.94□□□□□ -0.82
LETMD1-219ENST00000549395 NR2E3Q9Y5X4 410 aa9.94□□□□□ -0.82
LETMD1-219ENST00000549395 TESPA1A2RU30 521 aaPredicted RBP9.93□□□□□ -0.82
LETMD1-219ENST00000549395 PPP1R12BO60237 982 aaPredicted RBP9.93□□□□□ -0.82
LETMD1-219ENST00000549395 Q7L0L9 218 aa9.93□□□□□ -0.82
LETMD1-219ENST00000549395 DEFB123Q8N688 67 aa9.93□□□□□ -0.82
LETMD1-219ENST00000549395 ARHGAP39Q9C0H5 1083 aa9.93□□□□□ -0.82
LETMD1-219ENST00000549395 DEFB129Q9H1M3 183 aa9.93□□□□□ -0.82
LETMD1-219ENST00000549395 TIMELESSQ9UNS1 1208 aa9.93□□□□□ -0.82
LETMD1-219ENST00000549395 STXBP5LQ9Y2K9 1186 aa9.93□□□□□ -0.82
LETMD1-219ENST00000549395 OTOFQ9HC10 1997 aa9.93□□□□□ -0.82
LETMD1-219ENST00000549395 ECM29Q5VYK3 1845 aa9.93□□□□□ -0.82
LETMD1-219ENST00000549395 COL1A1P02452 1464 aaPredicted RBP9.92□□□□□ -0.82
LETMD1-219ENST00000549395 ATP5J2-PTCD1G3V325 749 aa9.92□□□□□ -0.82
LETMD1-219ENST00000549395 IRS4O14654 1257 aaPredicted RBP9.92□□□□□ -0.82
LETMD1-219ENST00000549395 TAF1CQ15572 869 aaPredicted RBP9.92□□□□□ -0.82
LETMD1-219ENST00000549395 UBE2Q1Q7Z7E8 422 aa9.92□□□□□ -0.82
LETMD1-219ENST00000549395 ZFYVE28Q9HCC9 887 aa9.92□□□□□ -0.82
LETMD1-219ENST00000549395 STAP2Q9UGK3 403 aa9.92□□□□□ -0.82
LETMD1-219ENST00000549395 XDHP47989 1333 aa9.91□□□□□ -0.82
LETMD1-219ENST00000549395 MYO3BQ8WXR4 1341 aa9.91□□□□□ -0.82
LETMD1-219ENST00000549395 ECM2O94769 699 aaPredicted RBP9.91□□□□□ -0.82
LETMD1-219ENST00000549395 ATP2B4P23634 1241 aa9.91□□□□□ -0.82
LETMD1-219ENST00000549395 ANKRD13DQ6ZTN6 518 aa9.91□□□□□ -0.82
LETMD1-219ENST00000549395 KIAA0825Q8IV33 1275 aa9.91□□□□□ -0.82
LETMD1-219ENST00000549395 NKX2-3Q8TAU0 364 aa9.91□□□□□ -0.82
LETMD1-219ENST00000549395 ZBED3Q96IU2 234 aaPredicted RBP9.91□□□□□ -0.82
LETMD1-219ENST00000549395 MS4A4AQ96JQ5 239 aa9.91□□□□□ -0.82
LETMD1-219ENST00000549395 ISCA1Q9BUE6 129 aa9.91□□□□□ -0.82
LETMD1-219ENST00000549395 TSPYL4Q9UJ04 414 aa9.91□□□□□ -0.82
LETMD1-219ENST00000549395 SPEF2Q9C093 1822 aa9.91□□□□□ -0.82
LETMD1-219ENST00000549395 UNCXA6NJT0 531 aa9.9□□□□□ -0.82
LETMD1-219ENST00000549395 USP2O75604 605 aaPredicted RBP9.9□□□□□ -0.82
LETMD1-219ENST00000549395 GJA8P48165 433 aa9.9□□□□□ -0.82
LETMD1-219ENST00000549395 IREB2P48200 963 aaKnown RBP9.9□□□□□ -0.82
LETMD1-219ENST00000549395 NBPF12Q5TAG4 269 aaPredicted RBP9.9□□□□□ -0.82
LETMD1-219ENST00000549395 STRIP1Q5VSL9 837 aa9.9□□□□□ -0.82
LETMD1-219ENST00000549395 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.9□□□□□ -0.82
LETMD1-219ENST00000549395 ANKRD13AQ8IZ07 590 aa9.9□□□□□ -0.82
LETMD1-219ENST00000549395 BRI3BPQ8WY22 251 aa9.9□□□□□ -0.82
LETMD1-219ENST00000549395 OPTNQ96CV9 577 aa9.9□□□□□ -0.82
LETMD1-219ENST00000549395 CCDC85AQ96PX6 553 aaPredicted RBP9.9□□□□□ -0.82
LETMD1-219ENST00000549395 ELP3Q9H9T3 547 aa9.9□□□□□ -0.82
LETMD1-219ENST00000549395 ALPK3Q96L96 1907 aa9.9□□□□□ -0.83
LETMD1-219ENST00000549395 EVI5O60447 810 aa9.89□□□□□ -0.83
LETMD1-219ENST00000549395 LACTBP83111 547 aaPredicted RBP9.89□□□□□ -0.83
LETMD1-219ENST00000549395 KIF22Q14807 665 aa9.89□□□□□ -0.83
LETMD1-219ENST00000549395 SUPT20HL1Q3ZLR7 823 aa9.89□□□□□ -0.83
LETMD1-219ENST00000549395 GPR153Q6NV75 609 aa9.89□□□□□ -0.83
LETMD1-219ENST00000549395 FAM43AQ8N2R8 423 aa9.89□□□□□ -0.83
LETMD1-219ENST00000549395 CNKSR2Q8WXI2 1034 aa9.89□□□□□ -0.83
LETMD1-219ENST00000549395 MTMR10Q9NXD2 777 aa9.89□□□□□ -0.83
LETMD1-219ENST00000549395 VCANP13611 3396 aa9.89□□□□□ -0.83
LETMD1-219ENST00000549395 MED23Q9ULK4 1368 aa9.88□□□□□ -0.83
LETMD1-219ENST00000549395 CCL15-CCL14A0A0B4J2E2 113 aa9.88□□□□□ -0.83
LETMD1-219ENST00000549395 FARP2O94887 1054 aaPredicted RBP9.88□□□□□ -0.83
LETMD1-219ENST00000549395 NEFMP07197 916 aa9.88□□□□□ -0.83
LETMD1-219ENST00000549395 GJB1P08034 283 aa9.88□□□□□ -0.83
LETMD1-219ENST00000549395 CCL5P13501 91 aa9.88□□□□□ -0.83
LETMD1-219ENST00000549395 MMP14P50281 582 aa9.88□□□□□ -0.83
LETMD1-219ENST00000549395 DLGAP5Q15398 846 aa9.88□□□□□ -0.83
LETMD1-219ENST00000549395 CCL15Q16663 113 aa9.88□□□□□ -0.83
LETMD1-219ENST00000549395 TTLL5Q6EMB2 1281 aa9.88□□□□□ -0.83
LETMD1-219ENST00000549395 PLBD2Q8NHP8 589 aa9.88□□□□□ -0.83
LETMD1-219ENST00000549395 RNF208Q9H0X6 261 aa9.88□□□□□ -0.83
LETMD1-219ENST00000549395 PRDM6Q9NQX0 595 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms