RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 NUCB1Q02818 461 aa11.98□□□□□ -0.49
SMARCD1-206ENST00000549274 TFCP2Q12800 502 aa11.98□□□□□ -0.49
SMARCD1-206ENST00000549274 TNNI3KQ59H18 835 aa11.98□□□□□ -0.49
SMARCD1-206ENST00000549274 CCDC158Q5M9N0 1113 aa11.98□□□□□ -0.49
SMARCD1-206ENST00000549274 GORABQ5T7V8 394 aa11.98□□□□□ -0.49
SMARCD1-206ENST00000549274 ZNF804AQ7Z570 1209 aa11.98□□□□□ -0.49
SMARCD1-206ENST00000549274 CHD1LQ86WJ1 897 aa11.98□□□□□ -0.49
SMARCD1-206ENST00000549274 PUS3Q9BZE2 481 aaKnown RBP11.98□□□□□ -0.49
SMARCD1-206ENST00000549274 ZC3H12CQ9C0D7 883 aaKnown RBP11.98□□□□□ -0.49
SMARCD1-206ENST00000549274 FPGT-TNNI3KV9GXZ4 949 aa11.98□□□□□ -0.49
SMARCD1-206ENST00000549274 A0A1B0GUL7 405 aa11.97□□□□□ -0.49
SMARCD1-206ENST00000549274 G3V3G9 751 aa11.97□□□□□ -0.49
SMARCD1-206ENST00000549274 C6orf229H3BNL8 230 aa11.97□□□□□ -0.49
SMARCD1-206ENST00000549274 ERC2O15083 957 aa11.97□□□□□ -0.49
SMARCD1-206ENST00000549274 UQCRFS1P1P0C7P4 283 aa11.97□□□□□ -0.49
SMARCD1-206ENST00000549274 FGFR2P21802 821 aa11.97□□□□□ -0.49
SMARCD1-206ENST00000549274 GPSM2P81274 684 aa11.97□□□□□ -0.49
SMARCD1-206ENST00000549274 DCAF8Q5TAQ9 597 aa11.97□□□□□ -0.49
SMARCD1-206ENST00000549274 B4GALNT3Q6L9W6 998 aa11.97□□□□□ -0.49
SMARCD1-206ENST00000549274 AACSQ86V21 672 aa11.97□□□□□ -0.49
SMARCD1-206ENST00000549274 VPS37DQ86XT2 251 aa11.97□□□□□ -0.49
SMARCD1-206ENST00000549274 TAOK3Q9H2K8 898 aa11.97□□□□□ -0.49
SMARCD1-206ENST00000549274 CHD4Q14839 1912 aa11.97□□□□□ -0.49
SMARCD1-206ENST00000549274 MYH13Q9UKX3 1938 aa11.96□□□□□ -0.49
SMARCD1-206ENST00000549274 AOX1Q06278 1338 aa11.96□□□□□ -0.49
SMARCD1-206ENST00000549274 TTC41PQ6P2S7 1318 aa11.96□□□□□ -0.49
SMARCD1-206ENST00000549274 APBB1O00213 710 aa11.96□□□□□ -0.49
SMARCD1-206ENST00000549274 SEMA3EO15041 775 aa11.96□□□□□ -0.49
SMARCD1-206ENST00000549274 IGSF3O75054 1194 aa11.96□□□□□ -0.49
SMARCD1-206ENST00000549274 DSG3P32926 999 aa11.96□□□□□ -0.49
SMARCD1-206ENST00000549274 WASHC4Q2M389 1173 aa11.96□□□□□ -0.49
SMARCD1-206ENST00000549274 TBC1D16Q8TBP0 767 aa11.96□□□□□ -0.49
SMARCD1-206ENST00000549274 NEUROD6Q96NK8 337 aa11.96□□□□□ -0.49
SMARCD1-206ENST00000549274 DUOX1Q9NRD9 1551 aa11.96□□□□□ -0.5
SMARCD1-206ENST00000549274 GPR162Q16538 588 aa11.95□□□□□ -0.5
SMARCD1-206ENST00000549274 HELBQ8NG08 1087 aaPredicted RBP11.95□□□□□ -0.5
SMARCD1-206ENST00000549274 ZNF512BQ96KM6 892 aaPredicted RBP11.95□□□□□ -0.5
SMARCD1-206ENST00000549274 COA1Q9GZY4 146 aa11.95□□□□□ -0.5
SMARCD1-206ENST00000549274 IL1RAPL2Q9NP60 686 aa11.95□□□□□ -0.5
SMARCD1-206ENST00000549274 SNED1Q8TER0 1413 aa11.94□□□□□ -0.5
SMARCD1-206ENST00000549274 COL4A1P02462 1669 aa11.94□□□□□ -0.5
SMARCD1-206ENST00000549274 DICER1Q9UPY3 1922 aaKnown RBP11.94□□□□□ -0.5
SMARCD1-206ENST00000549274 TAF5LO75529 589 aa11.94□□□□□ -0.5
SMARCD1-206ENST00000549274 HIBADHP31937 336 aaKnown RBP11.94□□□□□ -0.5
SMARCD1-206ENST00000549274 KIAA2012Q0VF49 1180 aa11.94□□□□□ -0.5
SMARCD1-206ENST00000549274 TTC39AQ5SRH9 613 aa11.94□□□□□ -0.5
SMARCD1-206ENST00000549274 PELP1Q8IZL8 1130 aaKnown RBP11.94□□□□□ -0.5
SMARCD1-206ENST00000549274 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.94□□□□□ -0.5
SMARCD1-206ENST00000549274 XAGE2Q96GT9 111 aa11.94□□□□□ -0.5
SMARCD1-206ENST00000549274 LNPKQ9C0E8 428 aa11.94□□□□□ -0.5
SMARCD1-206ENST00000549274 ZNF219Q9P2Y4 722 aaPredicted RBP11.94□□□□□ -0.5
SMARCD1-206ENST00000549274 PDS5AQ29RF7 1337 aaKnown RBP11.93□□□□□ -0.5
SMARCD1-206ENST00000549274 ZC3H4Q9UPT8 1303 aaKnown RBP11.93□□□□□ -0.5
SMARCD1-206ENST00000549274 PPIP5K2O43314 1243 aa11.93□□□□□ -0.5
SMARCD1-206ENST00000549274 FRAT2O75474 233 aaPredicted RBP11.93□□□□□ -0.5
SMARCD1-206ENST00000549274 GLRX3O76003 335 aaKnown RBP11.93□□□□□ -0.5
SMARCD1-206ENST00000549274 MX1P20591 662 aa11.93□□□□□ -0.5
SMARCD1-206ENST00000549274 IARSP41252 1262 aaKnown RBP11.93□□□□□ -0.5
SMARCD1-206ENST00000549274 LRRFIP1Q32MZ4 808 aaKnown RBP11.93□□□□□ -0.5
SMARCD1-206ENST00000549274 TMED8Q6PL24 325 aaPredicted RBP11.93□□□□□ -0.5
SMARCD1-206ENST00000549274 PODNQ7Z5L7 613 aa11.93□□□□□ -0.5
SMARCD1-206ENST00000549274 TICAM2Q86XR7 235 aa11.93□□□□□ -0.5
SMARCD1-206ENST00000549274 ZGPATQ8N5A5 531 aaKnown RBP11.93□□□□□ -0.5
SMARCD1-206ENST00000549274 JDP2Q8WYK2 163 aa11.93□□□□□ -0.5
SMARCD1-206ENST00000549274 ECHDC1Q9NTX5 307 aa11.93□□□□□ -0.5
SMARCD1-206ENST00000549274 DENND2AQ9ULE3 1009 aa11.93□□□□□ -0.5
SMARCD1-206ENST00000549274 SRCAPQ6ZRS2 3230 aa11.93□□□□□ -0.5
SMARCD1-206ENST00000549274 LMNB1P20700 586 aa11.92□□□□□ -0.5
SMARCD1-206ENST00000549274 ARID4AP29374 1257 aaPredicted RBP11.92□□□□□ -0.5
SMARCD1-206ENST00000549274 TIMM10P62072 90 aa11.92□□□□□ -0.5
SMARCD1-206ENST00000549274 ARHGAP27Q6ZUM4 889 aa11.92□□□□□ -0.5
SMARCD1-206ENST00000549274 FBXO33Q7Z6M2 555 aa11.92□□□□□ -0.5
SMARCD1-206ENST00000549274 NIM1KQ8IY84 436 aa11.92□□□□□ -0.5
SMARCD1-206ENST00000549274 LARGE2Q8N3Y3 721 aa11.92□□□□□ -0.5
SMARCD1-206ENST00000549274 TBC1D22AQ8WUA7 517 aa11.92□□□□□ -0.5
SMARCD1-206ENST00000549274 EAF2Q96CJ1 260 aaPredicted RBP11.92□□□□□ -0.5
SMARCD1-206ENST00000549274 OSBPL3Q9H4L5 887 aa11.92□□□□□ -0.5
SMARCD1-206ENST00000549274 STAP2Q9UGK3 403 aa11.92□□□□□ -0.5
SMARCD1-206ENST00000549274 POLLQ9UGP5 575 aa11.92□□□□□ -0.5
SMARCD1-206ENST00000549274 CCDC88AQ3V6T2 1871 aa11.91□□□□□ -0.5
SMARCD1-206ENST00000549274 CAPN15O75808 1086 aa11.91□□□□□ -0.5
SMARCD1-206ENST00000549274 ATP5JP18859 108 aa11.91□□□□□ -0.5
SMARCD1-206ENST00000549274 MMP14P50281 582 aa11.91□□□□□ -0.5
SMARCD1-206ENST00000549274 TTF1Q15361 905 aaPredicted RBP11.91□□□□□ -0.5
SMARCD1-206ENST00000549274 CCDC102BQ68D86 513 aa11.91□□□□□ -0.5
SMARCD1-206ENST00000549274 CCDC8Q9H0W5 538 aaPredicted RBP11.91□□□□□ -0.5
SMARCD1-206ENST00000549274 DBNLQ9UJU6 430 aaKnown RBP11.91□□□□□ -0.5
SMARCD1-206ENST00000549274 SBF1O95248 1867 aa11.91□□□□□ -0.5
SMARCD1-206ENST00000549274 PSME4Q14997 1843 aa11.9□□□□□ -0.5
SMARCD1-206ENST00000549274 GOLGB1Q14789 3259 aaKnown RBP11.9□□□□□ -0.5
SMARCD1-206ENST00000549274 NFKBIEO00221 500 aa11.9□□□□□ -0.5
SMARCD1-206ENST00000549274 SMARCA5O60264 1052 aaPredicted RBP11.9□□□□□ -0.5
SMARCD1-206ENST00000549274 IL1R1P14778 569 aa11.9□□□□□ -0.5
SMARCD1-206ENST00000549274 PDE1AP54750 535 aa11.9□□□□□ -0.5
SMARCD1-206ENST00000549274 SPTY2D1Q68D10 685 aaPredicted RBP11.9□□□□□ -0.5
SMARCD1-206ENST00000549274 WDR66Q8TBY9 1149 aa11.9□□□□□ -0.5
SMARCD1-206ENST00000549274 FAM84BQ96KN1 310 aaPredicted RBP11.9□□□□□ -0.5
SMARCD1-206ENST00000549274 DBNDD2Q9BQY9 259 aa11.9□□□□□ -0.5
SMARCD1-206ENST00000549274 SUGT1Q9Y2Z0 365 aa11.9□□□□□ -0.5
SMARCD1-206ENST00000549274 MYO3BQ8WXR4 1341 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms