RNA–Protein interactions for RNA: ENST00000549094.1

SMPDL3B-206, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

TSL 5 BASIC

Gene SMPDL3B, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-206ENST00000549094 TOB2Q14106 344 aaPredicted RBP15.79■□□□□ 0.12
SMPDL3B-206ENST00000549094 CAMK4Q16566 473 aa15.79■□□□□ 0.12
SMPDL3B-206ENST00000549094 ATL3Q6DD88 541 aa15.79■□□□□ 0.12
SMPDL3B-206ENST00000549094 ZNF790Q6PG37 636 aa15.79■□□□□ 0.12
SMPDL3B-206ENST00000549094 CHMP4CQ96CF2 233 aa15.79■□□□□ 0.12
SMPDL3B-206ENST00000549094 CLIP2Q9UDT6 1046 aa15.79■□□□□ 0.12
SMPDL3B-206ENST00000549094 PA2G4Q9UQ80 394 aaKnown RBP15.79■□□□□ 0.12
SMPDL3B-206ENST00000549094 U3KPZ7 1027 aaPredicted RBP15.79■□□□□ 0.12
SMPDL3B-206ENST00000549094 BTAF1O14981 1849 aa15.78■□□□□ 0.12
SMPDL3B-206ENST00000549094 A0A0D9SFI3 127 aa15.78■□□□□ 0.12
SMPDL3B-206ENST00000549094 CBX1P83916 185 aa15.78■□□□□ 0.12
SMPDL3B-206ENST00000549094 SLC39A6Q13433 755 aa15.78■□□□□ 0.12
SMPDL3B-206ENST00000549094 STX1AQ16623 288 aa15.78■□□□□ 0.12
SMPDL3B-206ENST00000549094 USPL1Q5W0Q7 1092 aa15.78■□□□□ 0.12
SMPDL3B-206ENST00000549094 CKAP2LQ8IYA6 745 aa15.78■□□□□ 0.12
SMPDL3B-206ENST00000549094 CCDC112Q8NEF3 446 aa15.78■□□□□ 0.12
SMPDL3B-206ENST00000549094 MRFAP1L1Q96HT8 127 aa15.78■□□□□ 0.12
SMPDL3B-206ENST00000549094 LLPHQ9BRT6 129 aaKnown RBP15.78■□□□□ 0.12
SMPDL3B-206ENST00000549094 H3BQV1 296 aa15.77■□□□□ 0.12
SMPDL3B-206ENST00000549094 PLSCR1O15162 318 aa15.77■□□□□ 0.12
SMPDL3B-206ENST00000549094 TNNT1P13805 278 aa15.77■□□□□ 0.12
SMPDL3B-206ENST00000549094 EZH2Q15910 746 aaKnown RBP15.77■□□□□ 0.12
SMPDL3B-206ENST00000549094 IFFO2Q5TF58 517 aa15.77■□□□□ 0.12
SMPDL3B-206ENST00000549094 SUCLG2Q96I99 432 aa15.77■□□□□ 0.12
SMPDL3B-206ENST00000549094 OGFRQ9NZT2 677 aa15.77■□□□□ 0.12
SMPDL3B-206ENST00000549094 CHMP3Q9Y3E7 222 aa15.77■□□□□ 0.12
SMPDL3B-206ENST00000549094 SRCAPQ6ZRS2 3230 aa15.77■□□□□ 0.11
SMPDL3B-206ENST00000549094 KCNQ3O43525 872 aa15.76■□□□□ 0.11
SMPDL3B-206ENST00000549094 SASH1O94885 1247 aa15.76■□□□□ 0.11
SMPDL3B-206ENST00000549094 DHX8Q14562 1220 aaKnown RBP15.76■□□□□ 0.11
SMPDL3B-206ENST00000549094 ATP2B3Q16720 1220 aa15.76■□□□□ 0.11
SMPDL3B-206ENST00000549094 JARID2Q92833 1246 aaPredicted RBP15.76■□□□□ 0.11
SMPDL3B-206ENST00000549094 EAF2Q96CJ1 260 aaPredicted RBP15.76■□□□□ 0.11
SMPDL3B-206ENST00000549094 KIF2AO00139 706 aaPredicted RBP15.76■□□□□ 0.11
SMPDL3B-206ENST00000549094 HMGB1P09429 215 aaKnown RBP15.76■□□□□ 0.11
SMPDL3B-206ENST00000549094 NCBP1Q09161 790 aaKnown RBP15.76■□□□□ 0.11
SMPDL3B-206ENST00000549094 TPD52L1Q16890 204 aaPredicted RBP15.76■□□□□ 0.11
SMPDL3B-206ENST00000549094 NAA16Q6N069 864 aaPredicted RBP15.76■□□□□ 0.11
SMPDL3B-206ENST00000549094 TICAM2Q86XR7 235 aa15.76■□□□□ 0.11
SMPDL3B-206ENST00000549094 C16orf45Q96MC5 204 aaPredicted RBP15.76■□□□□ 0.11
SMPDL3B-206ENST00000549094 BICC1Q9H694 974 aaKnown RBP15.76■□□□□ 0.11
SMPDL3B-206ENST00000549094 ATG3Q9NT62 314 aa15.76■□□□□ 0.11
SMPDL3B-206ENST00000549094 ASAP1Q9ULH1 1129 aa15.76■□□□□ 0.11
SMPDL3B-206ENST00000549094 HSP90B1P14625 803 aaKnown RBP15.75■□□□□ 0.11
SMPDL3B-206ENST00000549094 NEXNQ0ZGT2 675 aa15.75■□□□□ 0.11
SMPDL3B-206ENST00000549094 CCDC73Q6ZRK6 1079 aa15.75■□□□□ 0.11
SMPDL3B-206ENST00000549094 SMARCC1Q92922 1105 aaPredicted RBP15.75■□□□□ 0.11
SMPDL3B-206ENST00000549094 BRF1Q92994 677 aa15.75■□□□□ 0.11
SMPDL3B-206ENST00000549094 ZNF396Q96N95 335 aaPredicted RBP15.75■□□□□ 0.11
SMPDL3B-206ENST00000549094 NEK1Q96PY6 1258 aa15.75■□□□□ 0.11
SMPDL3B-206ENST00000549094 DNAJC25Q9H1X3 360 aa15.75■□□□□ 0.11
SMPDL3B-206ENST00000549094 DDX21Q9NR30 783 aaKnown RBP eCLIP15.75■□□□□ 0.11
SMPDL3B-206ENST00000549094 PAPPAQ13219 1627 aa15.74■□□□□ 0.11
SMPDL3B-206ENST00000549094 NR1I2O75469 434 aa15.74■□□□□ 0.11
SMPDL3B-206ENST00000549094 TAF5LO75529 589 aa15.74■□□□□ 0.11
SMPDL3B-206ENST00000549094 ANXA1P04083 346 aa15.74■□□□□ 0.11
SMPDL3B-206ENST00000549094 GABPB1Q06547 395 aaPredicted RBP15.74■□□□□ 0.11
SMPDL3B-206ENST00000549094 PTF1AQ7RTS3 328 aa15.74■□□□□ 0.11
SMPDL3B-206ENST00000549094 PGBD1Q96JS3 809 aa15.74■□□□□ 0.11
SMPDL3B-206ENST00000549094 FMNL2Q96PY5 1086 aa15.74■□□□□ 0.11
SMPDL3B-206ENST00000549094 CCDC8Q9H0W5 538 aaPredicted RBP15.74■□□□□ 0.11
SMPDL3B-206ENST00000549094 BOLA2Q9H3K6 86 aa15.74■□□□□ 0.11
SMPDL3B-206ENST00000549094 TFIP11Q9UBB9 837 aaKnown RBP15.74■□□□□ 0.11
SMPDL3B-206ENST00000549094 COL15A1P39059 1388 aa15.74■□□□□ 0.11
SMPDL3B-206ENST00000549094 ATP5JP18859 108 aa15.73■□□□□ 0.11
SMPDL3B-206ENST00000549094 CWF19L2Q2TBE0 894 aaKnown RBP15.73■□□□□ 0.11
SMPDL3B-206ENST00000549094 CEP135Q66GS9 1140 aa15.73■□□□□ 0.11
SMPDL3B-206ENST00000549094 FAM173BQ6P4H8 233 aa15.73■□□□□ 0.11
SMPDL3B-206ENST00000549094 ZNF496Q96IT1 587 aaPredicted RBP15.73■□□□□ 0.11
SMPDL3B-206ENST00000549094 ANO10Q9NW15 660 aa15.73■□□□□ 0.11
SMPDL3B-206ENST00000549094 LRP5O75197 1615 aa15.73■□□□□ 0.11
SMPDL3B-206ENST00000549094 AFDNP55196 1824 aaKnown RBP15.73■□□□□ 0.11
SMPDL3B-206ENST00000549094 LAMA4Q16363 1823 aa15.73■□□□□ 0.11
SMPDL3B-206ENST00000549094 C5P01031 1676 aa15.73■□□□□ 0.11
SMPDL3B-206ENST00000549094 UBR2Q8IWV8 1755 aa15.72■□□□□ 0.11
SMPDL3B-206ENST00000549094 FAM177BA6PVY3 158 aa15.72■□□□□ 0.11
SMPDL3B-206ENST00000549094 PTCD1O75127 700 aaKnown RBP15.72■□□□□ 0.11
SMPDL3B-206ENST00000549094 GSDMDP57764 484 aa15.72■□□□□ 0.11
SMPDL3B-206ENST00000549094 LRMPQ12912 555 aa15.72■□□□□ 0.11
SMPDL3B-206ENST00000549094 STK3Q13188 491 aa15.72■□□□□ 0.11
SMPDL3B-206ENST00000549094 SMARCC2Q8TAQ2 1214 aa15.72■□□□□ 0.11
SMPDL3B-206ENST00000549094 KCND1Q9NSA2 647 aa15.72■□□□□ 0.11
SMPDL3B-206ENST00000549094 BECN2A8MW95 431 aa15.72■□□□□ 0.11
SMPDL3B-206ENST00000549094 KINO60870 393 aaKnown RBP15.72■□□□□ 0.11
SMPDL3B-206ENST00000549094 U2AF2P26368 475 aaKnown RBP eCLIP15.72■□□□□ 0.11
SMPDL3B-206ENST00000549094 IQCB1Q15051 598 aa15.72■□□□□ 0.11
SMPDL3B-206ENST00000549094 TAF3Q5VWG9 929 aa15.72■□□□□ 0.11
SMPDL3B-206ENST00000549094 NAT10Q9H0A0 1025 aaKnown RBP15.72■□□□□ 0.11
SMPDL3B-206ENST00000549094 PALLDQ8WX93 1383 aa15.72■□□□□ 0.11
SMPDL3B-206ENST00000549094 KCPQ6ZWJ8 1503 aa15.71■□□□□ 0.11
SMPDL3B-206ENST00000549094 SPEF2Q9C093 1822 aa15.71■□□□□ 0.11
SMPDL3B-206ENST00000549094 PFKFB2O60825 505 aa15.71■□□□□ 0.11
SMPDL3B-206ENST00000549094 Q6ZUG5 572 aa15.71■□□□□ 0.11
SMPDL3B-206ENST00000549094 ZNF589Q86UQ0 364 aaPredicted RBP15.71■□□□□ 0.11
SMPDL3B-206ENST00000549094 CEP57L1Q8IYX8 460 aa15.71■□□□□ 0.11
SMPDL3B-206ENST00000549094 CACTINQ8WUQ7 758 aaKnown RBP15.71■□□□□ 0.11
SMPDL3B-206ENST00000549094 TCEANC2Q96MN5 208 aa15.71■□□□□ 0.11
SMPDL3B-206ENST00000549094 TLR7Q9NYK1 1049 aaKnown RBP15.71■□□□□ 0.11
SMPDL3B-206ENST00000549094 LY75O60449 1722 aa15.7■□□□□ 0.1
SMPDL3B-206ENST00000549094 SH3TC1Q8TE82 1336 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms