RNA–Protein interactions for RNA: ENST00000548984.1

PFDN5-206, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-206ENST00000548984 HDAC5Q9UQL6 1122 aa12.86□□□□□ -0.35
PFDN5-206ENST00000548984 RASSF10A6NK89 507 aa12.85□□□□□ -0.35
PFDN5-206ENST00000548984 RARSP54136 660 aaKnown RBP12.85□□□□□ -0.35
PFDN5-206ENST00000548984 TBC1D10BQ4KMP7 808 aaPredicted RBP12.85□□□□□ -0.35
PFDN5-206ENST00000548984 ZNF804AQ7Z570 1209 aa12.85□□□□□ -0.35
PFDN5-206ENST00000548984 ARHGAP45Q92619 1136 aa12.85□□□□□ -0.35
PFDN5-206ENST00000548984 KAZALD1Q96I82 304 aa12.85□□□□□ -0.35
PFDN5-206ENST00000548984 GMLQ99445 158 aa12.85□□□□□ -0.35
PFDN5-206ENST00000548984 BICC1Q9H694 974 aaKnown RBP12.85□□□□□ -0.35
PFDN5-206ENST00000548984 MKRN1Q9UHC7 482 aaKnown RBP12.85□□□□□ -0.35
PFDN5-206ENST00000548984 ABT1Q9ULW3 272 aaKnown RBP12.85□□□□□ -0.35
PFDN5-206ENST00000548984 SHTN1A0MZ66 631 aa12.84□□□□□ -0.35
PFDN5-206ENST00000548984 USP17L8P0C7I0 530 aa12.84□□□□□ -0.35
PFDN5-206ENST00000548984 HNRNPUQ00839 825 aaKnown RBP eCLIP12.84□□□□□ -0.35
PFDN5-206ENST00000548984 DACT2Q5SW24 774 aa12.84□□□□□ -0.35
PFDN5-206ENST00000548984 SAMD7Q7Z3H4 446 aa12.84□□□□□ -0.35
PFDN5-206ENST00000548984 ANKRD44Q8N8A2 993 aa12.84□□□□□ -0.35
PFDN5-206ENST00000548984 USP44Q9H0E7 712 aa12.84□□□□□ -0.35
PFDN5-206ENST00000548984 NOB1Q9ULX3 412 aaKnown RBP12.84□□□□□ -0.35
PFDN5-206ENST00000548984 MROH5Q6ZUA9 1318 aa12.84□□□□□ -0.35
PFDN5-206ENST00000548984 IRS2Q9Y4H2 1338 aa12.84□□□□□ -0.35
PFDN5-206ENST00000548984 THSD7BQ9C0I4 1608 aa12.84□□□□□ -0.35
PFDN5-206ENST00000548984 WTIPA6NIX2 430 aaPredicted RBP12.83□□□□□ -0.36
PFDN5-206ENST00000548984 TRAF5O00463 557 aa12.83□□□□□ -0.36
PFDN5-206ENST00000548984 KLRK1P26718 216 aa12.83□□□□□ -0.36
PFDN5-206ENST00000548984 UBE4AQ14139 1066 aa12.83□□□□□ -0.36
PFDN5-206ENST00000548984 DEFB115Q30KQ5 88 aa12.83□□□□□ -0.36
PFDN5-206ENST00000548984 TXNRD3Q86VQ6 643 aa12.83□□□□□ -0.36
PFDN5-206ENST00000548984 OGFOD1Q8N543 542 aa12.83□□□□□ -0.36
PFDN5-206ENST00000548984 DCPSQ96C86 337 aaKnown RBP12.83□□□□□ -0.36
PFDN5-206ENST00000548984 ZNF594Q96JF6 807 aaPredicted RBP12.83□□□□□ -0.36
PFDN5-206ENST00000548984 GLIS2Q9BZE0 524 aaPredicted RBP12.83□□□□□ -0.36
PFDN5-206ENST00000548984 IPO8O15397 1037 aaKnown RBP12.82□□□□□ -0.36
PFDN5-206ENST00000548984 TAF5LO75529 589 aa12.82□□□□□ -0.36
PFDN5-206ENST00000548984 CELF2O95319 508 aaKnown RBP12.82□□□□□ -0.36
PFDN5-206ENST00000548984 UBTFL1P0CB47 393 aaPredicted RBP12.82□□□□□ -0.36
PFDN5-206ENST00000548984 ECE1P42892 770 aa12.82□□□□□ -0.36
PFDN5-206ENST00000548984 KRT26Q7Z3Y9 468 aa12.82□□□□□ -0.36
PFDN5-206ENST00000548984 HELBQ8NG08 1087 aaPredicted RBP12.82□□□□□ -0.36
PFDN5-206ENST00000548984 FBXW7Q969H0 707 aa12.82□□□□□ -0.36
PFDN5-206ENST00000548984 CD209Q9NNX6 404 aa12.82□□□□□ -0.36
PFDN5-206ENST00000548984 MYOZ2Q9NPC6 264 aa12.82□□□□□ -0.36
PFDN5-206ENST00000548984 GGA3Q9NZ52 723 aa12.82□□□□□ -0.36
PFDN5-206ENST00000548984 TLL2Q9Y6L7 1015 aa12.82□□□□□ -0.36
PFDN5-206ENST00000548984 PITPNM2Q9BZ72 1349 aa12.82□□□□□ -0.36
PFDN5-206ENST00000548984 EGFRP00533 1210 aa12.81□□□□□ -0.36
PFDN5-206ENST00000548984 IL1R1P14778 569 aa12.81□□□□□ -0.36
PFDN5-206ENST00000548984 FKBP1AP62942 108 aaKnown RBP12.81□□□□□ -0.36
PFDN5-206ENST00000548984 RBM26Q5T8P6 1007 aaKnown RBP12.81□□□□□ -0.36
PFDN5-206ENST00000548984 TTLL5Q6EMB2 1281 aa12.81□□□□□ -0.36
PFDN5-206ENST00000548984 SULF1Q8IWU6 871 aa12.81□□□□□ -0.36
PFDN5-206ENST00000548984 HHIPL1Q96JK4 782 aa12.81□□□□□ -0.36
PFDN5-206ENST00000548984 HDAC9Q9UKV0 1011 aa12.81□□□□□ -0.36
PFDN5-206ENST00000548984 ZBED9Q6R2W3 1325 aa12.81□□□□□ -0.36
PFDN5-206ENST00000548984 ARAP2Q8WZ64 1704 aa12.8□□□□□ -0.36
PFDN5-206ENST00000548984 PLIN1O60240 522 aa12.8□□□□□ -0.36
PFDN5-206ENST00000548984 HSPA1AP0DMV8 641 aaKnown RBP12.8□□□□□ -0.36
PFDN5-206ENST00000548984 HSPA1BP0DMV9 641 aaKnown RBP12.8□□□□□ -0.36
PFDN5-206ENST00000548984 VEGFBP49765 207 aa12.8□□□□□ -0.36
PFDN5-206ENST00000548984 GTF2IP78347 998 aa12.8□□□□□ -0.36
PFDN5-206ENST00000548984 METTL24Q5JXM2 366 aa12.8□□□□□ -0.36
PFDN5-206ENST00000548984 CST9Q5W186 159 aa12.8□□□□□ -0.36
PFDN5-206ENST00000548984 FBXO3Q9UK99 471 aa12.8□□□□□ -0.36
PFDN5-206ENST00000548984 RIPOR2Q9Y4F9 1068 aa12.8□□□□□ -0.36
PFDN5-206ENST00000548984 GNAI3P08754 354 aa12.79□□□□□ -0.36
PFDN5-206ENST00000548984 FMR1Q06787 632 aaKnown RBP eCLIP12.79□□□□□ -0.36
PFDN5-206ENST00000548984 SCARF1Q14162 830 aa12.79□□□□□ -0.36
PFDN5-206ENST00000548984 INTS3Q68E01 1043 aaKnown RBP12.79□□□□□ -0.36
PFDN5-206ENST00000548984 USP48Q86UV5 1035 aa12.79□□□□□ -0.36
PFDN5-206ENST00000548984 PUS3Q9BZE2 481 aaKnown RBP12.79□□□□□ -0.36
PFDN5-206ENST00000548984 ZNF408Q9H9D4 720 aa12.79□□□□□ -0.36
PFDN5-206ENST00000548984 COL1A1P02452 1464 aaPredicted RBP12.78□□□□□ -0.36
PFDN5-206ENST00000548984 SNAP23O00161 211 aa12.78□□□□□ -0.36
PFDN5-206ENST00000548984 PDE8BO95263 885 aa12.78□□□□□ -0.36
PFDN5-206ENST00000548984 ANGEL2Q5VTE6 544 aaKnown RBP12.78□□□□□ -0.36
PFDN5-206ENST00000548984 ATF7IPQ6VMQ6 1270 aa12.78□□□□□ -0.36
PFDN5-206ENST00000548984 PAXIP1Q6ZW49 1069 aaPredicted RBP12.78□□□□□ -0.36
PFDN5-206ENST00000548984 SAPCD2Q86UD0 394 aa12.78□□□□□ -0.36
PFDN5-206ENST00000548984 CAPNS2Q96L46 248 aa12.78□□□□□ -0.36
PFDN5-206ENST00000548984 FAM205AQ6ZU69 1335 aa12.78□□□□□ -0.36
PFDN5-206ENST00000548984 WDR33Q9C0J8 1336 aaKnown RBP12.78□□□□□ -0.36
PFDN5-206ENST00000548984 ADM5C9JUS6 153 aa12.77□□□□□ -0.37
PFDN5-206ENST00000548984 EYA2O00167 538 aa12.77□□□□□ -0.37
PFDN5-206ENST00000548984 CIAO1O76071 339 aa12.77□□□□□ -0.37
PFDN5-206ENST00000548984 SASH1O94885 1247 aa12.77□□□□□ -0.37
PFDN5-206ENST00000548984 HIBADHP31937 336 aaKnown RBP12.77□□□□□ -0.37
PFDN5-206ENST00000548984 RFX5P48382 616 aaPredicted RBP12.77□□□□□ -0.37
PFDN5-206ENST00000548984 MAP2K1Q02750 393 aaPredicted RBP12.77□□□□□ -0.37
PFDN5-206ENST00000548984 PUM3Q15397 648 aaKnown RBP12.77□□□□□ -0.37
PFDN5-206ENST00000548984 LRRC24Q50LG9 513 aa12.77□□□□□ -0.37
PFDN5-206ENST00000548984 CAVIN4Q5BKX8 364 aa12.77□□□□□ -0.37
PFDN5-206ENST00000548984 KIAA0825Q8IV33 1275 aa12.77□□□□□ -0.37
PFDN5-206ENST00000548984 VGLL2Q8N8G2 317 aa12.77□□□□□ -0.37
PFDN5-206ENST00000548984 C2orf69Q8N8R5 385 aa12.77□□□□□ -0.37
PFDN5-206ENST00000548984 TDRD7Q8NHU6 1098 aaKnown RBP12.77□□□□□ -0.37
PFDN5-206ENST00000548984 AIDAQ96BJ3 306 aa12.77□□□□□ -0.37
PFDN5-206ENST00000548984 MXD3Q9BW11 206 aa12.77□□□□□ -0.37
PFDN5-206ENST00000548984 GBA2Q9HCG7 927 aaPredicted RBP12.77□□□□□ -0.37
PFDN5-206ENST00000548984 PAPPA2Q9BXP8 1791 aa12.76□□□□□ -0.37
PFDN5-206ENST00000548984 ECM29Q5VYK3 1845 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms