RNA–Protein interactions for RNA: ENST00000548279.5

CACNB3-208, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-208ENST00000548279 RBM26Q5T8P6 1007 aaKnown RBP29.18■■■□□ 2.26
CACNB3-208ENST00000548279 CST9Q5W186 159 aa29.18■■■□□ 2.26
CACNB3-208ENST00000548279 USP17L1Q7RTZ2 530 aa29.18■■■□□ 2.26
CACNB3-208ENST00000548279 ANKRD44Q8N8A2 993 aa29.18■■■□□ 2.26
CACNB3-208ENST00000548279 BICC1Q9H694 974 aaKnown RBP29.18■■■□□ 2.26
CACNB3-208ENST00000548279 MXD3Q9BW11 206 aa29.17■■■□□ 2.26
CACNB3-208ENST00000548279 COA1Q9GZY4 146 aa29.17■■■□□ 2.26
CACNB3-208ENST00000548279 USP44Q9H0E7 712 aa29.17■■■□□ 2.26
CACNB3-208ENST00000548279 RABL6Q3YEC7 729 aaPredicted RBP29.16■■■□□ 2.26
CACNB3-208ENST00000548279 DLK2Q6UY11 383 aa29.16■■■□□ 2.26
CACNB3-208ENST00000548279 AGBL3Q8NEM8 1001 aa29.16■■■□□ 2.26
CACNB3-208ENST00000548279 NOB1Q9ULX3 412 aaKnown RBP29.16■■■□□ 2.26
CACNB3-208ENST00000548279 KCNJ4P48050 445 aa29.15■■■□□ 2.26
CACNB3-208ENST00000548279 RARSP54136 660 aaKnown RBP29.15■■■□□ 2.26
CACNB3-208ENST00000548279 KIF4BQ2VIQ3 1234 aa29.15■■■□□ 2.26
CACNB3-208ENST00000548279 TAF7LQ5H9L4 462 aa29.15■■■□□ 2.26
CACNB3-208ENST00000548279 DACT2Q5SW24 774 aa29.15■■■□□ 2.26
CACNB3-208ENST00000548279 LDHAL6AQ6ZMR3 332 aa29.15■■■□□ 2.26
CACNB3-208ENST00000548279 PUS3Q9BZE2 481 aaKnown RBP29.15■■■□□ 2.26
CACNB3-208ENST00000548279 ASTN2O75129 1339 aaPredicted RBP29.15■■■□□ 2.26
CACNB3-208ENST00000548279 PCNTO95613 3336 aa29.15■■■□□ 2.26
CACNB3-208ENST00000548279 POLR2AP24928 1970 aaKnown RBP29.14■■■□□ 2.26
CACNB3-208ENST00000548279 RASSF10A6NK89 507 aa29.14■■■□□ 2.26
CACNB3-208ENST00000548279 VEGFBP49765 207 aa29.14■■■□□ 2.26
CACNB3-208ENST00000548279 BRPF1P55201 1214 aaPredicted RBP29.14■■■□□ 2.26
CACNB3-208ENST00000548279 ZNF280AP59817 542 aaPredicted RBP29.14■■■□□ 2.26
CACNB3-208ENST00000548279 ABT1Q9ULW3 272 aaKnown RBP29.13■■■□□ 2.25
CACNB3-208ENST00000548279 PLIN1O60240 522 aa29.12■■■□□ 2.25
CACNB3-208ENST00000548279 CDC37L1Q7L3B6 337 aa29.12■■■□□ 2.25
CACNB3-208ENST00000548279 USP48Q86UV5 1035 aa29.12■■■□□ 2.25
CACNB3-208ENST00000548279 FBXW7Q969H0 707 aa29.12■■■□□ 2.25
CACNB3-208ENST00000548279 CNNM1Q9NRU3 951 aa29.12■■■□□ 2.25
CACNB3-208ENST00000548279 C15orf52Q6ZUT6 534 aaKnown RBP29.11■■■□□ 2.25
CACNB3-208ENST00000548279 CELF2O95319 508 aaKnown RBP29.1■■■□□ 2.25
CACNB3-208ENST00000548279 HSPA1AP0DMV8 641 aaKnown RBP29.1■■■□□ 2.25
CACNB3-208ENST00000548279 HSPA1BP0DMV9 641 aaKnown RBP29.1■■■□□ 2.25
CACNB3-208ENST00000548279 HNRNPUQ00839 825 aaKnown RBP eCLIP29.1■■■□□ 2.25
CACNB3-208ENST00000548279 DEFB115Q30KQ5 88 aa29.1■■■□□ 2.25
CACNB3-208ENST00000548279 STRIP1Q5VSL9 837 aa29.1■■■□□ 2.25
CACNB3-208ENST00000548279 CD209Q9NNX6 404 aa29.1■■■□□ 2.25
CACNB3-208ENST00000548279 USP17L8P0C7I0 530 aa29.09■■■□□ 2.25
CACNB3-208ENST00000548279 GGA3Q9NZ52 723 aa29.09■■■□□ 2.25
CACNB3-208ENST00000548279 ADM5C9JUS6 153 aa29.08■■■□□ 2.25
CACNB3-208ENST00000548279 ZNF408Q9H9D4 720 aa29.08■■■□□ 2.25
CACNB3-208ENST00000548279 MYOZ2Q9NPC6 264 aa29.08■■■□□ 2.25
CACNB3-208ENST00000548279 RIPOR2Q9Y4F9 1068 aa29.08■■■□□ 2.25
CACNB3-208ENST00000548279 TLL2Q9Y6L7 1015 aa29.08■■■□□ 2.25
CACNB3-208ENST00000548279 GTF2IP78347 998 aa29.07■■■□□ 2.24
CACNB3-208ENST00000548279 LRRC24Q50LG9 513 aa29.07■■■□□ 2.24
CACNB3-208ENST00000548279 TTLL5Q6EMB2 1281 aa29.07■■■□□ 2.24
CACNB3-208ENST00000548279 KRT26Q7Z3Y9 468 aa29.07■■■□□ 2.24
CACNB3-208ENST00000548279 KLHDC4Q8TBB5 520 aa29.07■■■□□ 2.24
CACNB3-208ENST00000548279 SCARF1Q14162 830 aa29.06■■■□□ 2.24
CACNB3-208ENST00000548279 API5Q9BZZ5 524 aaKnown RBP29.06■■■□□ 2.24
CACNB3-208ENST00000548279 DCPSQ96C86 337 aaKnown RBP29.05■■■□□ 2.24
CACNB3-208ENST00000548279 MYO3BQ8WXR4 1341 aa29.04■■■□□ 2.24
CACNB3-208ENST00000548279 THSD7BQ9C0I4 1608 aa29.04■■■□□ 2.24
CACNB3-208ENST00000548279 WDR33Q9C0J8 1336 aaKnown RBP29.03■■■□□ 2.24
CACNB3-208ENST00000548279 IL1R1P14778 569 aa29.03■■■□□ 2.24
CACNB3-208ENST00000548279 ANGEL2Q5VTE6 544 aaKnown RBP29.03■■■□□ 2.24
CACNB3-208ENST00000548279 CYP4F22Q6NT55 531 aa29.03■■■□□ 2.24
CACNB3-208ENST00000548279 SAPCD2Q86UD0 394 aa29.03■■■□□ 2.24
CACNB3-208ENST00000548279 CERS5Q8N5B7 392 aa29.03■■■□□ 2.24
CACNB3-208ENST00000548279 TNNQ9UQP3 1299 aa29.03■■■□□ 2.24
CACNB3-208ENST00000548279 KIF16BQ96L93 1317 aa29.02■■■□□ 2.24
CACNB3-208ENST00000548279 BCAR3O75815 825 aa29.02■■■□□ 2.24
CACNB3-208ENST00000548279 RFX5P48382 616 aaPredicted RBP29.02■■■□□ 2.24
CACNB3-208ENST00000548279 UBE4AQ14139 1066 aa29.02■■■□□ 2.24
CACNB3-208ENST00000548279 ZNF804AQ7Z570 1209 aa29.02■■■□□ 2.24
CACNB3-208ENST00000548279 NBPF9Q3BBW0 867 aa29.01■■■□□ 2.23
CACNB3-208ENST00000548279 KIAA0825Q8IV33 1275 aa29.01■■■□□ 2.23
CACNB3-208ENST00000548279 SCAF8Q9UPN6 1271 aaKnown RBP29.01■■■□□ 2.23
CACNB3-208ENST00000548279 MROH5Q6ZUA9 1318 aa29■■■□□ 2.23
CACNB3-208ENST00000548279 UBTFL1P0CB47 393 aaPredicted RBP29■■■□□ 2.23
CACNB3-208ENST00000548279 VGLL2Q8N8G2 317 aa29■■■□□ 2.23
CACNB3-208ENST00000548279 ARHGAP45Q92619 1136 aa29■■■□□ 2.23
CACNB3-208ENST00000548279 CAPNS2Q96L46 248 aa29■■■□□ 2.23
CACNB3-208ENST00000548279 JAG2Q9Y219 1238 aa29■■■□□ 2.23
CACNB3-208ENST00000548279 GYG1P46976 350 aa28.99■■■□□ 2.23
CACNB3-208ENST00000548279 PAXIP1Q6ZW49 1069 aaPredicted RBP28.99■■■□□ 2.23
CACNB3-208ENST00000548279 SULF1Q8IWU6 871 aa28.99■■■□□ 2.23
CACNB3-208ENST00000548279 MEIS3Q99687 375 aa28.99■■■□□ 2.23
CACNB3-208ENST00000548279 WNT10BO00744 389 aa28.98■■■□□ 2.23
CACNB3-208ENST00000548279 GRM1Q13255 1194 aa28.98■■■□□ 2.23
CACNB3-208ENST00000548279 METTL24Q5JXM2 366 aa28.98■■■□□ 2.23
CACNB3-208ENST00000548279 OGFOD1Q8N543 542 aa28.98■■■□□ 2.23
CACNB3-208ENST00000548279 FAM84BQ96KN1 310 aaPredicted RBP28.98■■■□□ 2.23
CACNB3-208ENST00000548279 SASH1O94885 1247 aa28.97■■■□□ 2.23
CACNB3-208ENST00000548279 PTPN12Q05209 780 aaKnown RBP28.97■■■□□ 2.23
CACNB3-208ENST00000548279 COL13A1Q5TAT6 717 aaPredicted RBP28.97■■■□□ 2.23
CACNB3-208ENST00000548279 INTS3Q68E01 1043 aaKnown RBP28.97■■■□□ 2.23
CACNB3-208ENST00000548279 LRRFIP2Q9Y608 721 aaKnown RBP28.97■■■□□ 2.23
CACNB3-208ENST00000548279 FOXN1O15353 648 aa28.96■■■□□ 2.23
CACNB3-208ENST00000548279 TRIM27P14373 513 aa28.96■■■□□ 2.23
CACNB3-208ENST00000548279 TDRD7Q8NHU6 1098 aaKnown RBP28.96■■■□□ 2.23
CACNB3-208ENST00000548279 CDCA5Q96FF9 252 aa28.96■■■□□ 2.23
CACNB3-208ENST00000548279 PITPNM2Q9BZ72 1349 aa28.95■■■□□ 2.23
CACNB3-208ENST00000548279 ZBED3Q96IU2 234 aaPredicted RBP28.95■■■□□ 2.22
CACNB3-208ENST00000548279 WBP1LQ9NX94 342 aa28.95■■■□□ 2.22
CACNB3-208ENST00000548279 AOC2O75106 756 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms