RNA–Protein interactions for RNA: ENST00000548215.1

LINC02403-201, Transcript of long intergenic non-protein coding RNA 2403, humanhuman

TSL 3 BASIC

Gene LINC02403, Length 484 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02403-201ENST00000548215 ZNF609O15014 1411 aa12.44□□□□□ -0.42
LINC02403-201ENST00000548215 WTIPA6NIX2 430 aaPredicted RBP12.43□□□□□ -0.42
LINC02403-201ENST00000548215 IRS4O14654 1257 aaPredicted RBP12.43□□□□□ -0.42
LINC02403-201ENST00000548215 INHBEP58166 350 aa12.43□□□□□ -0.42
LINC02403-201ENST00000548215 CRHR2Q13324 411 aa12.43□□□□□ -0.42
LINC02403-201ENST00000548215 FBXW7Q969H0 707 aa12.43□□□□□ -0.42
LINC02403-201ENST00000548215 ZNF333Q96JL9 665 aa12.43□□□□□ -0.42
LINC02403-201ENST00000548215 CLMNQ96JQ2 1002 aa12.43□□□□□ -0.42
LINC02403-201ENST00000548215 RBM27Q9P2N5 1060 aaKnown RBP12.43□□□□□ -0.42
LINC02403-201ENST00000548215 PSME4Q14997 1843 aa12.42□□□□□ -0.42
LINC02403-201ENST00000548215 OGFOD1Q8N543 542 aa12.42□□□□□ -0.42
LINC02403-201ENST00000548215 WNK4Q96J92 1243 aa12.42□□□□□ -0.42
LINC02403-201ENST00000548215 ISCA1Q9BUE6 129 aa12.42□□□□□ -0.42
LINC02403-201ENST00000548215 SP3Q02447 781 aa12.41□□□□□ -0.42
LINC02403-201ENST00000548215 SLC9C1Q4G0N8 1177 aa12.41□□□□□ -0.42
LINC02403-201ENST00000548215 PODNQ7Z5L7 613 aa12.41□□□□□ -0.42
LINC02403-201ENST00000548215 CCDC85AQ96PX6 553 aaPredicted RBP12.41□□□□□ -0.42
LINC02403-201ENST00000548215 PLEKHF1Q96S99 279 aa12.41□□□□□ -0.42
LINC02403-201ENST00000548215 PTCH2Q9Y6C5 1203 aa12.41□□□□□ -0.42
LINC02403-201ENST00000548215 CLSPNQ9HAW4 1339 aa12.4□□□□□ -0.42
LINC02403-201ENST00000548215 DACT2Q5SW24 774 aa12.4□□□□□ -0.42
LINC02403-201ENST00000548215 ANKRD13DQ6ZTN6 518 aa12.4□□□□□ -0.42
LINC02403-201ENST00000548215 NBPF11Q86T75 865 aa12.4□□□□□ -0.42
LINC02403-201ENST00000548215 PLBD2Q8NHP8 589 aa12.4□□□□□ -0.42
LINC02403-201ENST00000548215 DPF3Q92784 378 aa12.4□□□□□ -0.42
LINC02403-201ENST00000548215 CHPF2Q9P2E5 772 aa12.4□□□□□ -0.42
LINC02403-201ENST00000548215 ZBTB48P10074 688 aaPredicted RBP12.39□□□□□ -0.43
LINC02403-201ENST00000548215 GJA5P36382 358 aa12.39□□□□□ -0.43
LINC02403-201ENST00000548215 KRT24Q2M2I5 525 aa12.39□□□□□ -0.43
LINC02403-201ENST00000548215 OTUD7BQ6GQQ9 843 aa12.39□□□□□ -0.43
LINC02403-201ENST00000548215 APOBEC3FQ8IUX4 373 aaKnown RBP12.39□□□□□ -0.43
LINC02403-201ENST00000548215 PTPN18Q99952 460 aa12.39□□□□□ -0.43
LINC02403-201ENST00000548215 XDHP47989 1333 aa12.38□□□□□ -0.43
LINC02403-201ENST00000548215 ATP2B4P23634 1241 aa12.38□□□□□ -0.43
LINC02403-201ENST00000548215 JARID2Q92833 1246 aaPredicted RBP12.38□□□□□ -0.43
LINC02403-201ENST00000548215 DEFB129Q9H1M3 183 aa12.38□□□□□ -0.43
LINC02403-201ENST00000548215 TRIM26Q12899 539 aaPredicted RBP12.37□□□□□ -0.43
LINC02403-201ENST00000548215 SH3TC2Q8TF17 1288 aa12.37□□□□□ -0.43
LINC02403-201ENST00000548215 LAMA3Q16787 3333 aa12.37□□□□□ -0.43
LINC02403-201ENST00000548215 UNC80Q8N2C7 3258 aa12.36□□□□□ -0.43
LINC02403-201ENST00000548215 PPP1R12BO60237 982 aaPredicted RBP12.36□□□□□ -0.43
LINC02403-201ENST00000548215 MAP3K11Q16584 847 aa12.36□□□□□ -0.43
LINC02403-201ENST00000548215 CCDC152Q4G0S7 254 aa12.36□□□□□ -0.43
LINC02403-201ENST00000548215 KIAA0825Q8IV33 1275 aa12.36□□□□□ -0.43
LINC02403-201ENST00000548215 ANKRD18AQ8IVF6 992 aa12.36□□□□□ -0.43
LINC02403-201ENST00000548215 ZBTB38Q8NAP3 1195 aaPredicted RBP12.36□□□□□ -0.43
LINC02403-201ENST00000548215 MAPK8IP3Q9UPT6 1336 aa12.36□□□□□ -0.43
LINC02403-201ENST00000548215 RIPK4P57078 832 aa12.35□□□□□ -0.43
LINC02403-201ENST00000548215 TRIM28Q13263 835 aaKnown RBP12.35□□□□□ -0.43
LINC02403-201ENST00000548215 STRIP1Q5VSL9 837 aa12.35□□□□□ -0.43
LINC02403-201ENST00000548215 TTLL5Q6EMB2 1281 aa12.35□□□□□ -0.43
LINC02403-201ENST00000548215 ZBED3Q96IU2 234 aaPredicted RBP12.35□□□□□ -0.43
LINC02403-201ENST00000548215 MYO3BQ8WXR4 1341 aa12.35□□□□□ -0.43
LINC02403-201ENST00000548215 SSC5DA1L4H1 1573 aa12.35□□□□□ -0.43
LINC02403-201ENST00000548215 ARHGEF6Q15052 776 aa12.34□□□□□ -0.43
LINC02403-201ENST00000548215 HDGFL1Q5TGJ6 251 aa12.34□□□□□ -0.43
LINC02403-201ENST00000548215 TXNRD3Q86VQ6 643 aa12.34□□□□□ -0.43
LINC02403-201ENST00000548215 BABAM1Q9NWV8 329 aa12.34□□□□□ -0.43
LINC02403-201ENST00000548215 PCDHAC2Q9Y5I4 1007 aa12.34□□□□□ -0.43
LINC02403-201ENST00000548215 ZNF646O15015 1829 aaPredicted RBP12.34□□□□□ -0.43
LINC02403-201ENST00000548215 MED23Q9ULK4 1368 aa12.33□□□□□ -0.44
LINC02403-201ENST00000548215 TESPA1A2RU30 521 aaPredicted RBP12.33□□□□□ -0.44
LINC02403-201ENST00000548215 SOX1O00570 391 aaPredicted RBP12.33□□□□□ -0.44
LINC02403-201ENST00000548215 PDE8AO60658 829 aa12.33□□□□□ -0.44
LINC02403-201ENST00000548215 USP2O75604 605 aaPredicted RBP12.33□□□□□ -0.44
LINC02403-201ENST00000548215 ECM2O94769 699 aaPredicted RBP12.33□□□□□ -0.44
LINC02403-201ENST00000548215 DLGAP5Q15398 846 aa12.33□□□□□ -0.44
LINC02403-201ENST00000548215 TAF1CQ15572 869 aaPredicted RBP12.33□□□□□ -0.44
LINC02403-201ENST00000548215 NBPF12Q5TAG4 269 aaPredicted RBP12.33□□□□□ -0.44
LINC02403-201ENST00000548215 LRCH3Q96II8 777 aa12.33□□□□□ -0.44
LINC02403-201ENST00000548215 ARHGAP39Q9C0H5 1083 aa12.33□□□□□ -0.44
LINC02403-201ENST00000548215 COA1Q9GZY4 146 aa12.33□□□□□ -0.44
LINC02403-201ENST00000548215 PRO3102Q9H379 93 aa12.33□□□□□ -0.44
LINC02403-201ENST00000548215 ELP3Q9H9T3 547 aa12.33□□□□□ -0.44
LINC02403-201ENST00000548215 MINPP1Q9UNW1 487 aa12.33□□□□□ -0.44
LINC02403-201ENST00000548215 LAS1LQ9Y4W2 734 aaKnown RBP12.33□□□□□ -0.44
LINC02403-201ENST00000548215 CLRN2A0PK11 232 aa12.32□□□□□ -0.44
LINC02403-201ENST00000548215 HSP90B1P14625 803 aaKnown RBP12.32□□□□□ -0.44
LINC02403-201ENST00000548215 IREB2P48200 963 aaKnown RBP12.32□□□□□ -0.44
LINC02403-201ENST00000548215 MNX1P50219 401 aaPredicted RBP12.32□□□□□ -0.44
LINC02403-201ENST00000548215 MMP14P50281 582 aa12.32□□□□□ -0.44
LINC02403-201ENST00000548215 CCT4P50991 539 aaKnown RBP12.32□□□□□ -0.44
LINC02403-201ENST00000548215 GTF2IP78347 998 aa12.32□□□□□ -0.44
LINC02403-201ENST00000548215 MTFR1Q15390 333 aa12.32□□□□□ -0.44
LINC02403-201ENST00000548215 SUPT20HL1Q3ZLR7 823 aa12.32□□□□□ -0.44
LINC02403-201ENST00000548215 RIC3Q7Z5B4 369 aa12.32□□□□□ -0.44
LINC02403-201ENST00000548215 CNKSR2Q8WXI2 1034 aa12.32□□□□□ -0.44
LINC02403-201ENST00000548215 OPTNQ96CV9 577 aa12.32□□□□□ -0.44
LINC02403-201ENST00000548215 SHISA4Q96DD7 197 aa12.32□□□□□ -0.44
LINC02403-201ENST00000548215 MS4A4AQ96JQ5 239 aa12.32□□□□□ -0.44
LINC02403-201ENST00000548215 MYD88Q99836 296 aa12.32□□□□□ -0.44
LINC02403-201ENST00000548215 ZFYVE28Q9HCC9 887 aa12.32□□□□□ -0.44
LINC02403-201ENST00000548215 LAMB1P07942 1786 aa12.31□□□□□ -0.44
LINC02403-201ENST00000548215 UNCXA6NJT0 531 aa12.31□□□□□ -0.44
LINC02403-201ENST00000548215 KLRK1P26718 216 aa12.31□□□□□ -0.44
LINC02403-201ENST00000548215 ANKRD13AQ8IZ07 590 aa12.31□□□□□ -0.44
LINC02403-201ENST00000548215 BRI3BPQ8WY22 251 aa12.31□□□□□ -0.44
LINC02403-201ENST00000548215 PNNQ9H307 717 aaKnown RBP12.31□□□□□ -0.44
LINC02403-201ENST00000548215 VEZTQ9HBM0 779 aa12.31□□□□□ -0.44
LINC02403-201ENST00000548215 HYPKQ9NX55 129 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms