RNA–Protein interactions for RNA: ENST00000547939.5

TUBA1A-204, Transcript of tubulin alpha 1a, humanhuman

TSL 3

Gene TUBA1A, Length 946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-204ENST00000547939 PODNQ7Z5L7 613 aa13.26□□□□□ -0.29
TUBA1A-204ENST00000547939 DDX60Q8IY21 1712 aaKnown RBP13.26□□□□□ -0.29
TUBA1A-204ENST00000547939 MICALL2Q8IY33 904 aa13.26□□□□□ -0.29
TUBA1A-204ENST00000547939 HHIPL1Q96JK4 782 aa13.26□□□□□ -0.29
TUBA1A-204ENST00000547939 LEMD3Q9Y2U8 911 aa13.26□□□□□ -0.29
TUBA1A-204ENST00000547939 ZBTB12Q9Y330 459 aaPredicted RBP13.26□□□□□ -0.29
TUBA1A-204ENST00000547939 CHMP3Q9Y3E7 222 aa13.26□□□□□ -0.29
TUBA1A-204ENST00000547939 LAMB2P55268 1798 aa13.25□□□□□ -0.29
TUBA1A-204ENST00000547939 GRM8O00222 908 aa13.25□□□□□ -0.29
TUBA1A-204ENST00000547939 VIL1P09327 827 aaKnown RBP13.25□□□□□ -0.29
TUBA1A-204ENST00000547939 KCNJ4P48050 445 aa13.25□□□□□ -0.29
TUBA1A-204ENST00000547939 CCT4P50991 539 aaKnown RBP13.25□□□□□ -0.29
TUBA1A-204ENST00000547939 RBBP6Q7Z6E9 1792 aaKnown RBP13.25□□□□□ -0.29
TUBA1A-204ENST00000547939 FXR1P51114 621 aaKnown RBP eCLIP13.24□□□□□ -0.29
TUBA1A-204ENST00000547939 CCDC57Q2TAC2 916 aa13.24□□□□□ -0.29
TUBA1A-204ENST00000547939 TAF7LQ5H9L4 462 aa13.24□□□□□ -0.29
TUBA1A-204ENST00000547939 CDC37L1Q7L3B6 337 aa13.24□□□□□ -0.29
TUBA1A-204ENST00000547939 MRPL50Q8N5N7 158 aaKnown RBP13.24□□□□□ -0.29
TUBA1A-204ENST00000547939 KCNQ5Q9NR82 932 aa13.24□□□□□ -0.29
TUBA1A-204ENST00000547939 PGAP2Q9UHJ9 254 aa13.24□□□□□ -0.29
TUBA1A-204ENST00000547939 PTPRCP08575 1304 aa13.23□□□□□ -0.29
TUBA1A-204ENST00000547939 USP17L3A6NCW0 530 aa13.23□□□□□ -0.29
TUBA1A-204ENST00000547939 USP17L4A6NCW7 530 aa13.23□□□□□ -0.29
TUBA1A-204ENST00000547939 CELF2O95319 508 aaKnown RBP13.23□□□□□ -0.29
TUBA1A-204ENST00000547939 FOXO4P98177 505 aa13.23□□□□□ -0.29
TUBA1A-204ENST00000547939 RBM26Q5T8P6 1007 aaKnown RBP13.23□□□□□ -0.29
TUBA1A-204ENST00000547939 LMBR1LQ6UX01 489 aa13.23□□□□□ -0.29
TUBA1A-204ENST00000547939 USP17L1Q7RTZ2 530 aa13.23□□□□□ -0.29
TUBA1A-204ENST00000547939 AGBL3Q8NEM8 1001 aa13.23□□□□□ -0.29
TUBA1A-204ENST00000547939 TRPM4Q8TD43 1214 aa13.23□□□□□ -0.29
TUBA1A-204ENST00000547939 COA1Q9GZY4 146 aa13.23□□□□□ -0.29
TUBA1A-204ENST00000547939 DUOX1Q9NRD9 1551 aa13.23□□□□□ -0.29
TUBA1A-204ENST00000547939 MED23Q9ULK4 1368 aa13.22□□□□□ -0.29
TUBA1A-204ENST00000547939 ZNF804BA4D1E1 1349 aa13.22□□□□□ -0.29
TUBA1A-204ENST00000547939 FAM155AB1AL88 458 aaPredicted RBP13.22□□□□□ -0.29
TUBA1A-204ENST00000547939 CT47B1P0C2W7 299 aaPredicted RBP13.22□□□□□ -0.29
TUBA1A-204ENST00000547939 HIRAP54198 1017 aaPredicted RBP13.22□□□□□ -0.29
TUBA1A-204ENST00000547939 ALDH1L2Q3SY69 923 aa13.22□□□□□ -0.29
TUBA1A-204ENST00000547939 TBC1D10BQ4KMP7 808 aaPredicted RBP13.22□□□□□ -0.29
TUBA1A-204ENST00000547939 RSBN1LQ6PCB5 846 aaPredicted RBP13.22□□□□□ -0.29
TUBA1A-204ENST00000547939 SAMD7Q7Z3H4 446 aa13.22□□□□□ -0.29
TUBA1A-204ENST00000547939 SSH1Q8WYL5 1049 aa13.22□□□□□ -0.29
TUBA1A-204ENST00000547939 DCPSQ96C86 337 aaKnown RBP13.22□□□□□ -0.29
TUBA1A-204ENST00000547939 GLIS2Q9BZE0 524 aaPredicted RBP13.22□□□□□ -0.29
TUBA1A-204ENST00000547939 PAPPA2Q9BXP8 1791 aa13.22□□□□□ -0.29
TUBA1A-204ENST00000547939 LRRC37AA6NMS7 1700 aa13.22□□□□□ -0.29
TUBA1A-204ENST00000547939 CHRNDQ07001 517 aa13.21□□□□□ -0.29
TUBA1A-204ENST00000547939 GCC1Q96CN9 775 aa13.21□□□□□ -0.29
TUBA1A-204ENST00000547939 CDCA7LQ96GN5 454 aa13.21□□□□□ -0.29
TUBA1A-204ENST00000547939 HPS5Q9UPZ3 1129 aa13.21□□□□□ -0.29
TUBA1A-204ENST00000547939 LAMA3Q16787 3333 aa13.2□□□□□ -0.3
TUBA1A-204ENST00000547939 SHTN1A0MZ66 631 aa13.2□□□□□ -0.3
TUBA1A-204ENST00000547939 USP17L8P0C7I0 530 aa13.2□□□□□ -0.3
TUBA1A-204ENST00000547939 KIF4BQ2VIQ3 1234 aa13.2□□□□□ -0.3
TUBA1A-204ENST00000547939 LDHAL6AQ6ZMR3 332 aa13.2□□□□□ -0.3
TUBA1A-204ENST00000547939 OGFOD1Q8N543 542 aa13.2□□□□□ -0.3
TUBA1A-204ENST00000547939 FBXW7Q969H0 707 aa13.2□□□□□ -0.3
TUBA1A-204ENST00000547939 CNNM1Q9NRU3 951 aa13.2□□□□□ -0.3
TUBA1A-204ENST00000547939 SMC4Q9NTJ3 1288 aa13.2□□□□□ -0.3
TUBA1A-204ENST00000547939 TAF1P21675 1872 aa13.19□□□□□ -0.3
TUBA1A-204ENST00000547939 COL4A1P02462 1669 aa13.19□□□□□ -0.3
TUBA1A-204ENST00000547939 WTIPA6NIX2 430 aaPredicted RBP13.19□□□□□ -0.3
TUBA1A-204ENST00000547939 NOGQ13253 232 aa13.19□□□□□ -0.3
TUBA1A-204ENST00000547939 STRIP1Q5VSL9 837 aa13.19□□□□□ -0.3
TUBA1A-204ENST00000547939 DLK2Q6UY11 383 aa13.19□□□□□ -0.3
TUBA1A-204ENST00000547939 KRT26Q7Z3Y9 468 aa13.19□□□□□ -0.3
TUBA1A-204ENST00000547939 USP48Q86UV5 1035 aa13.19□□□□□ -0.3
TUBA1A-204ENST00000547939 TRMT2AQ8IZ69 625 aaKnown RBP13.19□□□□□ -0.3
TUBA1A-204ENST00000547939 ZNF408Q9H9D4 720 aa13.19□□□□□ -0.3
TUBA1A-204ENST00000547939 SAGE1Q9NXZ1 904 aa13.19□□□□□ -0.3
TUBA1A-204ENST00000547939 MYO3BQ8WXR4 1341 aa13.18□□□□□ -0.3
TUBA1A-204ENST00000547939 PLIN1O60240 522 aa13.18□□□□□ -0.3
TUBA1A-204ENST00000547939 TAF5LO75529 589 aa13.18□□□□□ -0.3
TUBA1A-204ENST00000547939 NBPF7P0C2Y1 421 aaPredicted RBP13.18□□□□□ -0.3
TUBA1A-204ENST00000547939 MMP14P50281 582 aa13.18□□□□□ -0.3
TUBA1A-204ENST00000547939 ZNF280AP59817 542 aaPredicted RBP13.18□□□□□ -0.3
TUBA1A-204ENST00000547939 EPHA10Q5JZY3 1008 aa13.18□□□□□ -0.3
TUBA1A-204ENST00000547939 DIEXFQ68CQ4 756 aaKnown RBP13.18□□□□□ -0.3
TUBA1A-204ENST00000547939 TTLL5Q6EMB2 1281 aa13.18□□□□□ -0.3
TUBA1A-204ENST00000547939 CTU1Q7Z7A3 348 aaKnown RBP13.18□□□□□ -0.3
TUBA1A-204ENST00000547939 SULF1Q8IWU6 871 aa13.18□□□□□ -0.3
TUBA1A-204ENST00000547939 HELBQ8NG08 1087 aaPredicted RBP13.18□□□□□ -0.3
TUBA1A-204ENST00000547939 SUCLG2Q96I99 432 aa13.18□□□□□ -0.3
TUBA1A-204ENST00000547939 RNF186Q9NXI6 227 aa13.18□□□□□ -0.3
TUBA1A-204ENST00000547939 UTYO14607 1347 aa13.17□□□□□ -0.3
TUBA1A-204ENST00000547939 SCARF1Q14162 830 aa13.17□□□□□ -0.3
TUBA1A-204ENST00000547939 ZNF804AQ7Z570 1209 aa13.17□□□□□ -0.3
TUBA1A-204ENST00000547939 TXNRD3Q86VQ6 643 aa13.17□□□□□ -0.3
TUBA1A-204ENST00000547939 ZNF594Q96JF6 807 aaPredicted RBP13.17□□□□□ -0.3
TUBA1A-204ENST00000547939 GMLQ99445 158 aa13.17□□□□□ -0.3
TUBA1A-204ENST00000547939 MYOZ2Q9NPC6 264 aa13.17□□□□□ -0.3
TUBA1A-204ENST00000547939 TRPA1O75762 1119 aa13.16□□□□□ -0.3
TUBA1A-204ENST00000547939 EGFRP00533 1210 aa13.16□□□□□ -0.3
TUBA1A-204ENST00000547939 DACT2Q5SW24 774 aa13.16□□□□□ -0.3
TUBA1A-204ENST00000547939 C15orf52Q6ZUT6 534 aaKnown RBP13.16□□□□□ -0.3
TUBA1A-204ENST00000547939 API5Q9BZZ5 524 aaKnown RBP13.16□□□□□ -0.3
TUBA1A-204ENST00000547939 BICC1Q9H694 974 aaKnown RBP13.16□□□□□ -0.3
TUBA1A-204ENST00000547939 CD209Q9NNX6 404 aa13.16□□□□□ -0.3
TUBA1A-204ENST00000547939 HDAC9Q9UKV0 1011 aa13.16□□□□□ -0.3
TUBA1A-204ENST00000547939 HDAC5Q9UQL6 1122 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms