RNA–Protein interactions for RNA: ENST00000547878.6

TMEM116-205, Transcript of transmembrane protein 116, humanhuman

TSL 2

Gene TMEM116, Length 1,716 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-205ENST00000547878 TMX3Q96JJ7 454 aa10.38□□□□□ -0.75
TMEM116-205ENST00000547878 PDLIM2Q96JY6 352 aa10.38□□□□□ -0.75
TMEM116-205ENST00000547878 MIS18AQ9NYP9 233 aa10.38□□□□□ -0.75
TMEM116-205ENST00000547878 SLX4Q8IY92 1834 aa10.38□□□□□ -0.75
TMEM116-205ENST00000547878 WDR33Q9C0J8 1336 aaKnown RBP10.38□□□□□ -0.75
TMEM116-205ENST00000547878 LTBP3Q9NS15 1303 aa10.38□□□□□ -0.75
TMEM116-205ENST00000547878 CACNA1SQ13698 1873 aa10.38□□□□□ -0.75
TMEM116-205ENST00000547878 PNMA6EA0A0J9YXQ4 647 aa10.38□□□□□ -0.75
TMEM116-205ENST00000547878 CCDC66A2RUB6 948 aa10.38□□□□□ -0.75
TMEM116-205ENST00000547878 ZNF500O60304 480 aaPredicted RBP10.38□□□□□ -0.75
TMEM116-205ENST00000547878 BRD1O95696 1058 aa10.38□□□□□ -0.75
TMEM116-205ENST00000547878 SLC39A6Q13433 755 aa10.38□□□□□ -0.75
TMEM116-205ENST00000547878 POLA2Q14181 598 aa10.38□□□□□ -0.75
TMEM116-205ENST00000547878 TAF7Q15545 349 aaPredicted RBP10.38□□□□□ -0.75
TMEM116-205ENST00000547878 DEFB115Q30KQ5 88 aa10.38□□□□□ -0.75
TMEM116-205ENST00000547878 EAPPQ56P03 285 aaPredicted RBP10.38□□□□□ -0.75
TMEM116-205ENST00000547878 L3MBTL3Q96JM7 780 aaPredicted RBP10.38□□□□□ -0.75
TMEM116-205ENST00000547878 TAOK3Q9H2K8 898 aa10.38□□□□□ -0.75
TMEM116-205ENST00000547878 EXOC6BQ9Y2D4 811 aa10.38□□□□□ -0.75
TMEM116-205ENST00000547878 SCN11AQ9UI33 1791 aa10.37□□□□□ -0.75
TMEM116-205ENST00000547878 SCN4AP35499 1836 aa10.37□□□□□ -0.75
TMEM116-205ENST00000547878 UQCRHLA0A096LP55 91 aa10.37□□□□□ -0.75
TMEM116-205ENST00000547878 UQCRHP07919 91 aa10.37□□□□□ -0.75
TMEM116-205ENST00000547878 FMR1Q06787 632 aaKnown RBP eCLIP10.37□□□□□ -0.75
TMEM116-205ENST00000547878 TBC1D9BQ66K14 1250 aa10.37□□□□□ -0.75
TMEM116-205ENST00000547878 MAP1SQ66K74 1059 aaPredicted RBP10.37□□□□□ -0.75
TMEM116-205ENST00000547878 TSKSQ9UJT2 592 aa10.37□□□□□ -0.75
TMEM116-205ENST00000547878 ZNF541Q9H0D2 1346 aa10.37□□□□□ -0.75
TMEM116-205ENST00000547878 THSD7BQ9C0I4 1608 aa10.36□□□□□ -0.75
TMEM116-205ENST00000547878 IQCA1LA6NCM1 817 aa10.36□□□□□ -0.75
TMEM116-205ENST00000547878 APBB1O00213 710 aa10.36□□□□□ -0.75
TMEM116-205ENST00000547878 UBTFL1P0CB47 393 aaPredicted RBP10.36□□□□□ -0.75
TMEM116-205ENST00000547878 NEK4P51957 841 aa10.36□□□□□ -0.75
TMEM116-205ENST00000547878 AMOTQ4VCS5 1084 aa10.36□□□□□ -0.75
TMEM116-205ENST00000547878 C1orf141Q5JVX7 400 aa10.36□□□□□ -0.75
TMEM116-205ENST00000547878 PRR5LQ6MZQ0 368 aa10.36□□□□□ -0.75
TMEM116-205ENST00000547878 CAVIN1Q6NZI2 390 aaKnown RBP10.36□□□□□ -0.75
TMEM116-205ENST00000547878 IL17REQ8NFR9 667 aa10.36□□□□□ -0.75
TMEM116-205ENST00000547878 GPT2Q8TD30 523 aa10.36□□□□□ -0.75
TMEM116-205ENST00000547878 USP44Q9H0E7 712 aa10.36□□□□□ -0.75
TMEM116-205ENST00000547878 LGR6Q9HBX8 967 aa10.36□□□□□ -0.75
TMEM116-205ENST00000547878 RAD50Q92878 1312 aa10.36□□□□□ -0.75
TMEM116-205ENST00000547878 PATL2C9JE40 543 aaKnown RBP10.36□□□□□ -0.75
TMEM116-205ENST00000547878 TULP2O00295 520 aa10.36□□□□□ -0.75
TMEM116-205ENST00000547878 MCM5P33992 734 aa10.36□□□□□ -0.75
TMEM116-205ENST00000547878 MAP2K1Q02750 393 aaPredicted RBP10.36□□□□□ -0.75
TMEM116-205ENST00000547878 BRIP1Q9BX63 1249 aa10.36□□□□□ -0.75
TMEM116-205ENST00000547878 CLEC11AQ9Y240 323 aa10.36□□□□□ -0.75
TMEM116-205ENST00000547878 LRRFIP2Q9Y608 721 aaKnown RBP10.36□□□□□ -0.75
TMEM116-205ENST00000547878 MYCNP04198 464 aaPredicted RBP10.35□□□□□ -0.75
TMEM116-205ENST00000547878 HSPA4P34932 840 aa10.35□□□□□ -0.75
TMEM116-205ENST00000547878 PRPF40BQ6NWY9 871 aaKnown RBP10.35□□□□□ -0.75
TMEM116-205ENST00000547878 SASS6Q6UVJ0 657 aa10.35□□□□□ -0.75
TMEM116-205ENST00000547878 LRSAM1Q6UWE0 723 aa10.35□□□□□ -0.75
TMEM116-205ENST00000547878 CNTROBQ8N137 903 aa10.35□□□□□ -0.75
TMEM116-205ENST00000547878 LTBP1Q14766 1721 aa10.34□□□□□ -0.75
TMEM116-205ENST00000547878 MSNP26038 577 aaKnown RBP10.34□□□□□ -0.75
TMEM116-205ENST00000547878 EPHX2P34913 555 aa10.34□□□□□ -0.75
TMEM116-205ENST00000547878 PDE6BP35913 854 aa10.34□□□□□ -0.75
TMEM116-205ENST00000547878 GABPB1Q06547 395 aaPredicted RBP10.34□□□□□ -0.75
TMEM116-205ENST00000547878 MTX1Q13505 466 aa10.34□□□□□ -0.75
TMEM116-205ENST00000547878 HSP90AB4PQ58FF6 505 aa10.34□□□□□ -0.75
TMEM116-205ENST00000547878 HDGFL1Q5TGJ6 251 aa10.34□□□□□ -0.75
TMEM116-205ENST00000547878 TMEM87AQ8NBN3 555 aa10.34□□□□□ -0.75
TMEM116-205ENST00000547878 PI4K2BQ8TCG2 481 aa10.34□□□□□ -0.75
TMEM116-205ENST00000547878 SLC52A2Q9HAB3 445 aa10.34□□□□□ -0.75
TMEM116-205ENST00000547878 ANO2Q9NQ90 1003 aa10.34□□□□□ -0.75
TMEM116-205ENST00000547878 CGNQ9P2M7 1197 aaKnown RBP10.34□□□□□ -0.75
TMEM116-205ENST00000547878 PALD1Q9ULE6 856 aa10.34□□□□□ -0.75
TMEM116-205ENST00000547878 ABT1Q9ULW3 272 aaKnown RBP10.34□□□□□ -0.75
TMEM116-205ENST00000547878 SIPA1L3O60292 1781 aaPredicted RBP10.34□□□□□ -0.75
TMEM116-205ENST00000547878 SCN7AQ01118 1682 aa10.34□□□□□ -0.75
TMEM116-205ENST00000547878 PRPF40AO75400 957 aaKnown RBP10.33□□□□□ -0.76
TMEM116-205ENST00000547878 OLFM4Q6UX06 510 aa10.33□□□□□ -0.76
TMEM116-205ENST00000547878 KIF1BPQ96EK5 621 aa10.33□□□□□ -0.76
TMEM116-205ENST00000547878 HACL1Q9UJ83 578 aa10.33□□□□□ -0.76
TMEM116-205ENST00000547878 KIF3AQ9Y496 699 aa10.33□□□□□ -0.76
TMEM116-205ENST00000547878 ARFGEF2Q9Y6D5 1785 aa10.33□□□□□ -0.76
TMEM116-205ENST00000547878 MRC1P22897 1456 aa10.33□□□□□ -0.76
TMEM116-205ENST00000547878 TTC41PQ6P2S7 1318 aa10.33□□□□□ -0.76
TMEM116-205ENST00000547878 SGSM2O43147 1006 aa10.33□□□□□ -0.76
TMEM116-205ENST00000547878 SRGNP10124 158 aa10.33□□□□□ -0.76
TMEM116-205ENST00000547878 EIF5P55010 431 aaKnown RBP10.33□□□□□ -0.76
TMEM116-205ENST00000547878 GRM1Q13255 1194 aa10.33□□□□□ -0.76
TMEM116-205ENST00000547878 TSHZ3Q63HK5 1081 aa10.33□□□□□ -0.76
TMEM116-205ENST00000547878 CYP4F22Q6NT55 531 aa10.33□□□□□ -0.76
TMEM116-205ENST00000547878 CREBRFQ8IUR6 639 aa10.33□□□□□ -0.76
TMEM116-205ENST00000547878 EGFL6Q8IUX8 553 aa10.33□□□□□ -0.76
TMEM116-205ENST00000547878 C7orf43Q8WVR3 580 aa10.33□□□□□ -0.76
TMEM116-205ENST00000547878 SYAP1Q96A49 352 aaPredicted RBP10.33□□□□□ -0.76
TMEM116-205ENST00000547878 CAPNS2Q96L46 248 aa10.33□□□□□ -0.76
TMEM116-205ENST00000547878 MCOLN1Q9GZU1 580 aa10.33□□□□□ -0.76
TMEM116-205ENST00000547878 ZNF277Q9NRM2 450 aaPredicted RBP10.33□□□□□ -0.76
TMEM116-205ENST00000547878 TMEM63CQ9P1W3 806 aa10.33□□□□□ -0.76
TMEM116-205ENST00000547878 TRIM6-TRIM34B2RNG4 842 aa10.32□□□□□ -0.76
TMEM116-205ENST00000547878 EIF4A1P60842 406 aaKnown RBP10.32□□□□□ -0.76
TMEM116-205ENST00000547878 HSP90AB3PQ58FF7 597 aa10.32□□□□□ -0.76
TMEM116-205ENST00000547878 STYK1Q6J9G0 422 aa10.32□□□□□ -0.76
TMEM116-205ENST00000547878 ZNF592Q92610 1267 aa10.32□□□□□ -0.76
TMEM116-205ENST00000547878 RBSNQ9H1K0 784 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms