RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 NECTIN1Q15223 517 aa9.17□□□□□ -0.94
UBR1-202ENST00000546274 HSP90AB4PQ58FF6 505 aa9.17□□□□□ -0.94
UBR1-202ENST00000546274 AKAP4Q5JQC9 854 aa9.17□□□□□ -0.94
UBR1-202ENST00000546274 PPM1EQ8WY54 764 aa9.17□□□□□ -0.94
UBR1-202ENST00000546274 PA2G4Q9UQ80 394 aaKnown RBP9.17□□□□□ -0.94
UBR1-202ENST00000546274 TRPM3Q9HCF6 1732 aaPredicted RBP9.17□□□□□ -0.94
UBR1-202ENST00000546274 SCN11AQ9UI33 1791 aa9.17□□□□□ -0.94
UBR1-202ENST00000546274 ARID5BQ14865 1188 aa9.17□□□□□ -0.94
UBR1-202ENST00000546274 VPS53Q5VIR6 699 aa9.17□□□□□ -0.94
UBR1-202ENST00000546274 MPRIPQ6WCQ1 1025 aa9.17□□□□□ -0.94
UBR1-202ENST00000546274 ECHDC1Q9NTX5 307 aa9.17□□□□□ -0.94
UBR1-202ENST00000546274 SLAIN2Q9P270 581 aa9.17□□□□□ -0.94
UBR1-202ENST00000546274 PHF8Q9UPP1 1060 aa9.17□□□□□ -0.94
UBR1-202ENST00000546274 MTMR6Q9Y217 621 aa9.17□□□□□ -0.94
UBR1-202ENST00000546274 MAP3K2Q9Y2U5 619 aa9.17□□□□□ -0.94
UBR1-202ENST00000546274 ERBB3P21860 1342 aa9.17□□□□□ -0.94
UBR1-202ENST00000546274 KIF1AQ12756 1690 aa9.17□□□□□ -0.94
UBR1-202ENST00000546274 GJB2P29033 226 aa9.16□□□□□ -0.94
UBR1-202ENST00000546274 CWF19L2Q2TBE0 894 aaKnown RBP9.16□□□□□ -0.94
UBR1-202ENST00000546274 TTC19Q6DKK2 380 aaPredicted RBP9.16□□□□□ -0.94
UBR1-202ENST00000546274 PRPF40BQ6NWY9 871 aaKnown RBP9.16□□□□□ -0.94
UBR1-202ENST00000546274 TM6SF1Q9BZW5 370 aa9.16□□□□□ -0.94
UBR1-202ENST00000546274 SLC24A3Q9HC58 644 aa9.16□□□□□ -0.94
UBR1-202ENST00000546274 DBF4Q9UBU7 674 aaPredicted RBP9.16□□□□□ -0.94
UBR1-202ENST00000546274 MST1RQ04912 1400 aa9.16□□□□□ -0.94
UBR1-202ENST00000546274 MYH15Q9Y2K3 1946 aa9.16□□□□□ -0.94
UBR1-202ENST00000546274 PHLPP1O60346 1717 aa9.16□□□□□ -0.94
UBR1-202ENST00000546274 NHSL1Q5SYE7 1610 aa9.16□□□□□ -0.94
UBR1-202ENST00000546274 GIGYF1O75420 1035 aaPredicted RBP9.16□□□□□ -0.94
UBR1-202ENST00000546274 ACTN2P35609 894 aa9.16□□□□□ -0.94
UBR1-202ENST00000546274 SMC1AQ14683 1233 aaKnown RBP9.16□□□□□ -0.94
UBR1-202ENST00000546274 ME3Q16798 604 aa9.16□□□□□ -0.94
UBR1-202ENST00000546274 CCDC83Q8IWF9 413 aa9.16□□□□□ -0.94
UBR1-202ENST00000546274 PRPF38AQ8NAV1 312 aaKnown RBP9.16□□□□□ -0.94
UBR1-202ENST00000546274 SNRKQ9NRH2 765 aa9.16□□□□□ -0.94
UBR1-202ENST00000546274 ARGLU1Q9NWB6 273 aaPredicted RBP9.16□□□□□ -0.94
UBR1-202ENST00000546274 RAI14Q9P0K7 980 aa9.16□□□□□ -0.94
UBR1-202ENST00000546274 ADAM21Q9UKJ8 722 aa9.16□□□□□ -0.94
UBR1-202ENST00000546274 UTYO14607 1347 aa9.16□□□□□ -0.94
UBR1-202ENST00000546274 SASH1O94885 1247 aa9.16□□□□□ -0.94
UBR1-202ENST00000546274 PIP4K2BP78356 416 aa9.16□□□□□ -0.94
UBR1-202ENST00000546274 MMS22LQ6ZRQ5 1243 aa9.16□□□□□ -0.94
UBR1-202ENST00000546274 CLASRPQ8N2M8 674 aaKnown RBP9.16□□□□□ -0.94
UBR1-202ENST00000546274 MICALL1Q8N3F8 863 aa9.16□□□□□ -0.94
UBR1-202ENST00000546274 JAKMIP1Q96N16 626 aaKnown RBP9.16□□□□□ -0.94
UBR1-202ENST00000546274 PLEKHA4Q9H4M7 779 aa9.16□□□□□ -0.94
UBR1-202ENST00000546274 SMC3Q9UQE7 1217 aa9.16□□□□□ -0.94
UBR1-202ENST00000546274 CCDC171Q6TFL3 1326 aa9.15□□□□□ -0.94
UBR1-202ENST00000546274 AFDNP55196 1824 aaKnown RBP9.15□□□□□ -0.94
UBR1-202ENST00000546274 LAMA4Q16363 1823 aa9.15□□□□□ -0.94
UBR1-202ENST00000546274 PPP1R12AO14974 1030 aaPredicted RBP9.15□□□□□ -0.94
UBR1-202ENST00000546274 RNMTO43148 476 aaKnown RBP9.15□□□□□ -0.94
UBR1-202ENST00000546274 ALDH1L1O75891 902 aa9.15□□□□□ -0.94
UBR1-202ENST00000546274 DNM1Q05193 864 aaKnown RBP9.15□□□□□ -0.94
UBR1-202ENST00000546274 ZNF530Q6P9A1 599 aaPredicted RBP9.15□□□□□ -0.94
UBR1-202ENST00000546274 KSR2Q6VAB6 950 aa9.15□□□□□ -0.94
UBR1-202ENST00000546274 REXO1L1PQ8IX06 675 aa9.15□□□□□ -0.94
UBR1-202ENST00000546274 CAMK4Q16566 473 aa9.15□□□□□ -0.94
UBR1-202ENST00000546274 FAM227BQ96M60 508 aa9.15□□□□□ -0.94
UBR1-202ENST00000546274 EPC1Q9H2F5 836 aa9.15□□□□□ -0.94
UBR1-202ENST00000546274 CLIP2Q9UDT6 1046 aa9.15□□□□□ -0.94
UBR1-202ENST00000546274 TPCN1Q9ULQ1 816 aa9.15□□□□□ -0.94
UBR1-202ENST00000546274 JCADQ9P266 1359 aa9.15□□□□□ -0.94
UBR1-202ENST00000546274 MPHOSPH10O00566 681 aaKnown RBP9.15□□□□□ -0.95
UBR1-202ENST00000546274 ECM2O94769 699 aaPredicted RBP9.15□□□□□ -0.95
UBR1-202ENST00000546274 TEFQ10587 303 aa9.15□□□□□ -0.95
UBR1-202ENST00000546274 RNF20Q5VTR2 975 aa9.15□□□□□ -0.95
UBR1-202ENST00000546274 UBXN4Q92575 508 aa9.15□□□□□ -0.95
UBR1-202ENST00000546274 EAF2Q96CJ1 260 aaPredicted RBP9.15□□□□□ -0.95
UBR1-202ENST00000546274 EVI5LQ96CN4 794 aa9.15□□□□□ -0.95
UBR1-202ENST00000546274 SUCLG2Q96I99 432 aa9.15□□□□□ -0.95
UBR1-202ENST00000546274 TLR7Q9NYK1 1049 aaKnown RBP9.15□□□□□ -0.95
UBR1-202ENST00000546274 CCDC192P0DO97 292 aa9.14□□□□□ -0.95
UBR1-202ENST00000546274 IBSPP21815 317 aaPredicted RBP9.14□□□□□ -0.95
UBR1-202ENST00000546274 PDIA6Q15084 440 aa9.14□□□□□ -0.95
UBR1-202ENST00000546274 CCDC144BQ3MJ40 725 aa9.14□□□□□ -0.95
UBR1-202ENST00000546274 CCDC144CPQ8IYA2 1237 aa9.14□□□□□ -0.95
UBR1-202ENST00000546274 DDX54Q8TDD1 881 aaKnown RBP9.14□□□□□ -0.95
UBR1-202ENST00000546274 RUFY2Q8WXA3 655 aa9.14□□□□□ -0.95
UBR1-202ENST00000546274 MAP4K1Q92918 833 aa9.14□□□□□ -0.95
UBR1-202ENST00000546274 RBM33Q96EV2 1170 aaKnown RBP9.14□□□□□ -0.95
UBR1-202ENST00000546274 TAF6LQ9Y6J9 622 aa9.14□□□□□ -0.95
UBR1-202ENST00000546274 MED23Q9ULK4 1368 aa9.14□□□□□ -0.95
UBR1-202ENST00000546274 H0YHG0 523 aa9.14□□□□□ -0.95
UBR1-202ENST00000546274 NEBLO76041 1014 aa9.14□□□□□ -0.95
UBR1-202ENST00000546274 SKILP12757 684 aa9.14□□□□□ -0.95
UBR1-202ENST00000546274 SARNPP82979 210 aaKnown RBP9.14□□□□□ -0.95
UBR1-202ENST00000546274 SWT1Q5T5J6 900 aaKnown RBP9.14□□□□□ -0.95
UBR1-202ENST00000546274 CREB3L3Q68CJ9 461 aa9.14□□□□□ -0.95
UBR1-202ENST00000546274 FILIP1Q7Z7B0 1213 aa9.14□□□□□ -0.95
UBR1-202ENST00000546274 AACSQ86V21 672 aa9.14□□□□□ -0.95
UBR1-202ENST00000546274 SH2B1Q9NRF2 756 aaPredicted RBP9.14□□□□□ -0.95
UBR1-202ENST00000546274 RBM8AQ9Y5S9 174 aaKnown RBP9.14□□□□□ -0.95
UBR1-202ENST00000546274 CYP46A1Q9Y6A2 500 aa9.14□□□□□ -0.95
UBR1-202ENST00000546274 C1orf167Q5SNV9 1468 aa9.14□□□□□ -0.95
UBR1-202ENST00000546274 NMIQ13287 307 aaPredicted RBP9.13□□□□□ -0.95
UBR1-202ENST00000546274 NECAB1Q8N987 351 aa9.13□□□□□ -0.95
UBR1-202ENST00000546274 ZSCAN31Q96LW9 406 aaPredicted RBP9.13□□□□□ -0.95
UBR1-202ENST00000546274 BICC1Q9H694 974 aaKnown RBP9.13□□□□□ -0.95
UBR1-202ENST00000546274 C9orf78Q9NZ63 289 aaPredicted RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms