RNA–Protein interactions for RNA: ENST00000546191.5

NEK6-215, Transcript of NIMA related kinase 6, human

APPRIS P1 TSL 5 BASIC

Gene NEK6, Length 2,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEK6-215	ENST00000546191	PRPF38A	Q8NAV1	312 aa	Known RBP	11.46	□□□□□ -0.57
NEK6-215	ENST00000546191	PIK3R5	Q8WYR1	880 aa		11.46	□□□□□ -0.57
NEK6-215	ENST00000546191	SLC24A3	Q9HC58	644 aa		11.46	□□□□□ -0.57
NEK6-215	ENST00000546191	NRAP	Q86VF7	1730 aa		11.46	□□□□□ -0.57
NEK6-215	ENST00000546191	COL14A1	Q05707	1796 aa	Known RBP	11.46	□□□□□ -0.57
NEK6-215	ENST00000546191	COL5A2	P05997	1499 aa	Predicted RBP	11.46	□□□□□ -0.58
NEK6-215	ENST00000546191	CAND2	O75155	1236 aa		11.46	□□□□□ -0.58
NEK6-215	ENST00000546191	LARP1	Q6PKG0	1096 aa	Known RBP	11.46	□□□□□ -0.58
NEK6-215	ENST00000546191	SYAP1	Q96A49	352 aa	Predicted RBP	11.46	□□□□□ -0.58
NEK6-215	ENST00000546191	CEP135	Q66GS9	1140 aa		11.45	□□□□□ -0.58
NEK6-215	ENST00000546191	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	11.45	□□□□□ -0.58
NEK6-215	ENST00000546191	FAM210A	Q96ND0	272 aa		11.45	□□□□□ -0.58
NEK6-215	ENST00000546191	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	11.45	□□□□□ -0.58
NEK6-215	ENST00000546191	EP400	Q96L91	3159 aa		11.45	□□□□□ -0.58
NEK6-215	ENST00000546191	USP42	Q9H9J4	1324 aa	Known RBP	11.45	□□□□□ -0.58
NEK6-215	ENST00000546191	MAFG	O15525	162 aa		11.45	□□□□□ -0.58
NEK6-215	ENST00000546191	NBPF7	P0C2Y1	421 aa	Predicted RBP	11.45	□□□□□ -0.58
NEK6-215	ENST00000546191	ACTN2	P35609	894 aa		11.45	□□□□□ -0.58
NEK6-215	ENST00000546191	RHPN1	Q8TCX5	695 aa		11.45	□□□□□ -0.58
NEK6-215	ENST00000546191	BCL9L	Q86UU0	1499 aa		11.44	□□□□□ -0.58
NEK6-215	ENST00000546191	CTAGE5	O15320	804 aa		11.44	□□□□□ -0.58
NEK6-215	ENST00000546191	SMC2	O95347	1197 aa		11.44	□□□□□ -0.58
NEK6-215	ENST00000546191	IPO7	O95373	1038 aa	Known RBP	11.44	□□□□□ -0.58
NEK6-215	ENST00000546191	CP	P00450	1065 aa		11.44	□□□□□ -0.58
NEK6-215	ENST00000546191	MCM2	P49736	904 aa		11.44	□□□□□ -0.58
NEK6-215	ENST00000546191	CORO7	P57737	925 aa		11.44	□□□□□ -0.58
NEK6-215	ENST00000546191	LRMP	Q12912	555 aa		11.44	□□□□□ -0.58
NEK6-215	ENST00000546191	MEX3C	Q5U5Q3	659 aa	Known RBP	11.44	□□□□□ -0.58
NEK6-215	ENST00000546191	KSR2	Q6VAB6	950 aa		11.44	□□□□□ -0.58
NEK6-215	ENST00000546191	MIEF2	Q96C03	454 aa		11.44	□□□□□ -0.58
NEK6-215	ENST00000546191	NGLY1	Q96IV0	654 aa		11.44	□□□□□ -0.58
NEK6-215	ENST00000546191	HYPK	Q9NX55	129 aa		11.44	□□□□□ -0.58
NEK6-215	ENST00000546191	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	11.44	□□□□□ -0.58	4e-6	■■□□□ 11.9
NEK6-215	ENST00000546191	SLIT2	O94813	1529 aa		11.44	□□□□□ -0.58
NEK6-215	ENST00000546191	ANKRD65	E5RJM6	399 aa		11.44	□□□□□ -0.58
NEK6-215	ENST00000546191	SRGAP3	O43295	1099 aa		11.44	□□□□□ -0.58
NEK6-215	ENST00000546191	SURF6	O75683	361 aa	Known RBP	11.44	□□□□□ -0.58
NEK6-215	ENST00000546191	NEBL	O76041	1014 aa		11.44	□□□□□ -0.58
NEK6-215	ENST00000546191	LMAN1	P49257	510 aa		11.44	□□□□□ -0.58
NEK6-215	ENST00000546191	TPD52L1	Q16890	204 aa	Predicted RBP	11.44	□□□□□ -0.58
NEK6-215	ENST00000546191	FOXD4L5	Q5VV16	416 aa	Predicted RBP	11.44	□□□□□ -0.58
NEK6-215	ENST00000546191	FOXR1	Q6PIV2	292 aa		11.44	□□□□□ -0.58
NEK6-215	ENST00000546191	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	11.44	□□□□□ -0.58
NEK6-215	ENST00000546191	IRAK4	Q9NWZ3	460 aa		11.44	□□□□□ -0.58
NEK6-215	ENST00000546191	TPM1	P09493	284 aa		11.43	□□□□□ -0.58
NEK6-215	ENST00000546191	OAS2	P29728	719 aa	Known RBP	11.43	□□□□□ -0.58
NEK6-215	ENST00000546191	MTA1	Q13330	715 aa		11.43	□□□□□ -0.58
NEK6-215	ENST00000546191	ZGPAT	Q8N5A5	531 aa	Known RBP	11.43	□□□□□ -0.58
NEK6-215	ENST00000546191	AK7	Q96M32	723 aa		11.43	□□□□□ -0.58
NEK6-215	ENST00000546191	UBXN6	Q9BZV1	441 aa		11.43	□□□□□ -0.58
NEK6-215	ENST00000546191	AFF2	P51816	1311 aa		11.43	□□□□□ -0.58
NEK6-215	ENST00000546191	ZRANB2	O95218	330 aa	Known RBP eCLIP	11.43	□□□□□ -0.58
NEK6-215	ENST00000546191	MNAT1	P51948	309 aa		11.43	□□□□□ -0.58
NEK6-215	ENST00000546191	C1QTNF12	Q5T7M4	302 aa		11.43	□□□□□ -0.58
NEK6-215	ENST00000546191	TSHZ3	Q63HK5	1081 aa		11.43	□□□□□ -0.58
NEK6-215	ENST00000546191	CWC27	Q6UX04	472 aa	Known RBP	11.43	□□□□□ -0.58
NEK6-215	ENST00000546191	PI4K2B	Q8TCG2	481 aa		11.43	□□□□□ -0.58
NEK6-215	ENST00000546191	TATDN2	Q93075	761 aa		11.43	□□□□□ -0.58
NEK6-215	ENST00000546191	NUCKS1	Q9H1E3	243 aa	Known RBP	11.43	□□□□□ -0.58
NEK6-215	ENST00000546191	PDRG1	Q9NUG6	133 aa		11.43	□□□□□ -0.58
NEK6-215	ENST00000546191	SCN11A	Q9UI33	1791 aa		11.43	□□□□□ -0.58
NEK6-215	ENST00000546191	UTY	O14607	1347 aa		11.43	□□□□□ -0.58
NEK6-215	ENST00000546191	DDX21	Q9NR30	783 aa	Known RBP eCLIP	11.42	□□□□□ -0.58
NEK6-215	ENST00000546191	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	11.42	□□□□□ -0.58
NEK6-215	ENST00000546191	SLU7	O95391	586 aa	Known RBP	11.42	□□□□□ -0.58
NEK6-215	ENST00000546191	IVL	P07476	585 aa		11.42	□□□□□ -0.58
NEK6-215	ENST00000546191	CCDC96	Q2M329	555 aa		11.42	□□□□□ -0.58
NEK6-215	ENST00000546191	ERCC6L	Q2NKX8	1250 aa		11.42	□□□□□ -0.58
NEK6-215	ENST00000546191	RNF20	Q5VTR2	975 aa		11.42	□□□□□ -0.58
NEK6-215	ENST00000546191	JAKMIP3	Q5VZ66	844 aa		11.42	□□□□□ -0.58
NEK6-215	ENST00000546191	RILPL2	Q969X0	211 aa		11.42	□□□□□ -0.58
NEK6-215	ENST00000546191	SRRT	Q9BXP5	876 aa	Known RBP	11.42	□□□□□ -0.58
NEK6-215	ENST00000546191	TTC41P	Q6P2S7	1318 aa		11.42	□□□□□ -0.58
NEK6-215	ENST00000546191	C21orf2	O43822	256 aa		11.41	□□□□□ -0.58
NEK6-215	ENST00000546191	COQ9	O75208	318 aa		11.41	□□□□□ -0.58
NEK6-215	ENST00000546191	CSB-PGBD3	P0DP91	1061 aa		11.41	□□□□□ -0.58
NEK6-215	ENST00000546191	PAX7	P23759	505 aa		11.41	□□□□□ -0.58
NEK6-215	ENST00000546191	IRX1	P78414	480 aa	Predicted RBP	11.41	□□□□□ -0.58
NEK6-215	ENST00000546191	ANKRD23	Q86SG2	305 aa		11.41	□□□□□ -0.58
NEK6-215	ENST00000546191	UNC5CL	Q8IV45	518 aa		11.41	□□□□□ -0.58
NEK6-215	ENST00000546191	LINS1	Q8NG48	757 aa		11.41	□□□□□ -0.58
NEK6-215	ENST00000546191	IL1RAPL2	Q9NP60	686 aa		11.41	□□□□□ -0.58
NEK6-215	ENST00000546191	NLRP2	Q9NX02	1062 aa		11.41	□□□□□ -0.58
NEK6-215	ENST00000546191	MAP3K2	Q9Y2U5	619 aa		11.41	□□□□□ -0.58
NEK6-215	ENST00000546191	MRC1	P22897	1456 aa		11.41	□□□□□ -0.58
NEK6-215	ENST00000546191	DDX58	O95786	925 aa	Known RBP	11.41	□□□□□ -0.58
NEK6-215	ENST00000546191	RAPGEF4	Q8WZA2	1011 aa		11.41	□□□□□ -0.58
NEK6-215	ENST00000546191	EXOC4	Q96A65	974 aa		11.41	□□□□□ -0.58
NEK6-215	ENST00000546191	ETAA1	Q9NY74	926 aa		11.41	□□□□□ -0.58
NEK6-215	ENST00000546191	PSD3	Q9NYI0	1048 aa		11.41	□□□□□ -0.58
NEK6-215	ENST00000546191	RGS17	Q9UGC6	210 aa	Predicted RBP	11.41	□□□□□ -0.58
NEK6-215	ENST00000546191	KDM6A	O15550	1401 aa	Predicted RBP	11.41	□□□□□ -0.58
NEK6-215	ENST00000546191	NWD2	Q9ULI1	1742 aa		11.4	□□□□□ -0.58
NEK6-215	ENST00000546191	ANXA1	P04083	346 aa		11.4	□□□□□ -0.58
NEK6-215	ENST00000546191	PROSER3	Q2NL68	480 aa		11.4	□□□□□ -0.58
NEK6-215	ENST00000546191	ERC1	Q8IUD2	1116 aa		11.4	□□□□□ -0.58
NEK6-215	ENST00000546191	PAIP2	Q9BPZ3	127 aa	Known RBP	11.4	□□□□□ -0.58
NEK6-215	ENST00000546191	SLC52A2	Q9HAB3	445 aa		11.4	□□□□□ -0.58
NEK6-215	ENST00000546191	ADAM21	Q9UKJ8	722 aa		11.4	□□□□□ -0.58
NEK6-215	ENST00000546191	WDR17	Q8IZU2	1322 aa		11.4	□□□□□ -0.58

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