RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 RFX7Q2KHR2 1363 aa7.71□□□□□ -1.18
SNHG1-225ENST00000545920 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.7□□□□□ -1.18
SNHG1-225ENST00000545920 CRYBG1Q9Y4K1 1723 aa7.7□□□□□ -1.18
SNHG1-225ENST00000545920 UQCRHLA0A096LP55 91 aa7.7□□□□□ -1.18
SNHG1-225ENST00000545920 PNMA6EA0A0J9YXQ4 647 aa7.7□□□□□ -1.18
SNHG1-225ENST00000545920 F13A1P00488 732 aa7.7□□□□□ -1.18
SNHG1-225ENST00000545920 UQCRHP07919 91 aa7.7□□□□□ -1.18
SNHG1-225ENST00000545920 ZKSCAN1P17029 563 aaPredicted RBP7.7□□□□□ -1.18
SNHG1-225ENST00000545920 DHX8Q14562 1220 aaKnown RBP7.7□□□□□ -1.18
SNHG1-225ENST00000545920 KRT24Q2M2I5 525 aa7.7□□□□□ -1.18
SNHG1-225ENST00000545920 AMOTQ4VCS5 1084 aa7.7□□□□□ -1.18
SNHG1-225ENST00000545920 HDGFL1Q5TGJ6 251 aa7.7□□□□□ -1.18
SNHG1-225ENST00000545920 RNF20Q5VTR2 975 aa7.7□□□□□ -1.18
SNHG1-225ENST00000545920 G2E3Q7L622 706 aa7.7□□□□□ -1.18
SNHG1-225ENST00000545920 SAMD7Q7Z3H4 446 aa7.7□□□□□ -1.18
SNHG1-225ENST00000545920 CLASRPQ8N2M8 674 aaKnown RBP7.7□□□□□ -1.18
SNHG1-225ENST00000545920 NGDNQ8NEJ9 315 aaKnown RBP7.7□□□□□ -1.18
SNHG1-225ENST00000545920 EVI5LQ96CN4 794 aa7.7□□□□□ -1.18
SNHG1-225ENST00000545920 HMG20BQ9P0W2 317 aa7.7□□□□□ -1.18
SNHG1-225ENST00000545920 R3HCC1Q9Y3T6 440 aaKnown RBP7.7□□□□□ -1.18
SNHG1-225ENST00000545920 SNX14Q9Y5W7 946 aa7.7□□□□□ -1.18
SNHG1-225ENST00000545920 CYP46A1Q9Y6A2 500 aa7.7□□□□□ -1.18
SNHG1-225ENST00000545920 F6X3S4 739 aa7.69□□□□□ -1.18
SNHG1-225ENST00000545920 SURF6O75683 361 aaKnown RBP7.69□□□□□ -1.18
SNHG1-225ENST00000545920 CCDC192P0DO97 292 aa7.69□□□□□ -1.18
SNHG1-225ENST00000545920 HOXC9P31274 260 aa7.69□□□□□ -1.18
SNHG1-225ENST00000545920 CHAF1AQ13111 956 aaPredicted RBP7.69□□□□□ -1.18
SNHG1-225ENST00000545920 KRT32Q14532 448 aa7.69□□□□□ -1.18
SNHG1-225ENST00000545920 SYCP1Q15431 976 aa7.69□□□□□ -1.18
SNHG1-225ENST00000545920 TSGA10IPQ3SY00 556 aa7.69□□□□□ -1.18
SNHG1-225ENST00000545920 PPP1R42Q7Z4L9 355 aa7.69□□□□□ -1.18
SNHG1-225ENST00000545920 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.69□□□□□ -1.18
SNHG1-225ENST00000545920 SMAP1Q8IYB5 467 aaPredicted RBP7.69□□□□□ -1.18
SNHG1-225ENST00000545920 DNAAF4Q8WXU2 420 aa7.69□□□□□ -1.18
SNHG1-225ENST00000545920 HLA-CQ95604 372 aa7.69□□□□□ -1.18
SNHG1-225ENST00000545920 SCAND2PQ9GZW5 306 aaPredicted RBP7.69□□□□□ -1.18
SNHG1-225ENST00000545920 NWD1Q149M9 1564 aa7.68□□□□□ -1.18
SNHG1-225ENST00000545920 CEP170BQ9Y4F5 1589 aaPredicted RBP7.68□□□□□ -1.18
SNHG1-225ENST00000545920 GIGYF1O75420 1035 aaPredicted RBP7.68□□□□□ -1.18
SNHG1-225ENST00000545920 SYT1P21579 422 aa7.68□□□□□ -1.18
SNHG1-225ENST00000545920 KRT85P78386 507 aa7.68□□□□□ -1.18
SNHG1-225ENST00000545920 GUCA2AQ02747 115 aa7.68□□□□□ -1.18
SNHG1-225ENST00000545920 CTDSPL2Q05D32 466 aa7.68□□□□□ -1.18
SNHG1-225ENST00000545920 BEND3Q5T5X7 828 aa7.68□□□□□ -1.18
SNHG1-225ENST00000545920 ATL3Q6DD88 541 aa7.68□□□□□ -1.18
SNHG1-225ENST00000545920 KCNH5Q8NCM2 988 aa7.68□□□□□ -1.18
SNHG1-225ENST00000545920 RGS22Q8NE09 1264 aa7.68□□□□□ -1.18
SNHG1-225ENST00000545920 PBXIP1Q96AQ6 731 aa7.68□□□□□ -1.18
SNHG1-225ENST00000545920 HMX1Q9NP08 348 aaPredicted RBP7.68□□□□□ -1.18
SNHG1-225ENST00000545920 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.68□□□□□ -1.18
SNHG1-225ENST00000545920 ECHDC1Q9NTX5 307 aa7.68□□□□□ -1.18
SNHG1-225ENST00000545920 DDX19AQ9NUU7 478 aaKnown RBP7.68□□□□□ -1.18
SNHG1-225ENST00000545920 PALD1Q9ULE6 856 aa7.68□□□□□ -1.18
SNHG1-225ENST00000545920 UTYO14607 1347 aa7.68□□□□□ -1.18
SNHG1-225ENST00000545920 PHRF1Q9P1Y6 1649 aaKnown RBP7.67□□□□□ -1.18
SNHG1-225ENST00000545920 SRGAP3O43295 1099 aa7.67□□□□□ -1.18
SNHG1-225ENST00000545920 NEMFO60524 1076 aa7.67□□□□□ -1.18
SNHG1-225ENST00000545920 DDX58O95786 925 aaKnown RBP7.67□□□□□ -1.18
SNHG1-225ENST00000545920 EIF4A1P60842 406 aaKnown RBP7.67□□□□□ -1.18
SNHG1-225ENST00000545920 MTMR2Q13614 643 aa7.67□□□□□ -1.18
SNHG1-225ENST00000545920 NOLC1Q14978 699 aaKnown RBP eCLIP7.67□□□□□ -1.181e-323■■■■□ 19.8
SNHG1-225ENST00000545920 AKAP4Q5JQC9 854 aa7.67□□□□□ -1.18
SNHG1-225ENST00000545920 SWT1Q5T5J6 900 aaKnown RBP7.67□□□□□ -1.18
SNHG1-225ENST00000545920 ZNF787Q6DD87 383 aa7.67□□□□□ -1.18
SNHG1-225ENST00000545920 RUFY3Q7L099 469 aa7.67□□□□□ -1.18
SNHG1-225ENST00000545920 THEMISQ8N1K5 641 aaPredicted RBP7.67□□□□□ -1.18
SNHG1-225ENST00000545920 IL17REQ8NFR9 667 aa7.67□□□□□ -1.18
SNHG1-225ENST00000545920 FAM200AQ8TCP9 573 aa7.67□□□□□ -1.18
SNHG1-225ENST00000545920 IP6K1Q92551 441 aa7.67□□□□□ -1.18
SNHG1-225ENST00000545920 FUCA2Q9BTY2 467 aa7.67□□□□□ -1.18
SNHG1-225ENST00000545920 ALG2Q9H553 416 aa7.67□□□□□ -1.18
SNHG1-225ENST00000545920 PDRG1Q9NUG6 133 aa7.67□□□□□ -1.18
SNHG1-225ENST00000545920 HYPKQ9NX55 129 aa7.67□□□□□ -1.18
SNHG1-225ENST00000545920 DBF4Q9UBU7 674 aaPredicted RBP7.67□□□□□ -1.18
SNHG1-225ENST00000545920 AMOTL2Q9Y2J4 779 aa7.67□□□□□ -1.18
SNHG1-225ENST00000545920 KIF3AQ9Y496 699 aa7.67□□□□□ -1.18
SNHG1-225ENST00000545920 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.67□□□□□ -1.18
SNHG1-225ENST00000545920 COL15A1P39059 1388 aa7.67□□□□□ -1.18
SNHG1-225ENST00000545920 FOXO3O43524 673 aa7.66□□□□□ -1.18
SNHG1-225ENST00000545920 ADCY5O95622 1261 aa7.66□□□□□ -1.18
SNHG1-225ENST00000545920 IFIT2P09913 472 aaKnown RBP7.66□□□□□ -1.18
SNHG1-225ENST00000545920 CDC25BP30305 580 aa7.66□□□□□ -1.18
SNHG1-225ENST00000545920 AK2P54819 239 aa7.66□□□□□ -1.18
SNHG1-225ENST00000545920 XPCQ01831 940 aaPredicted RBP7.66□□□□□ -1.18
SNHG1-225ENST00000545920 PLEKHO1Q53GL0 409 aaPredicted RBP7.66□□□□□ -1.18
SNHG1-225ENST00000545920 UTP14CQ5TAP6 766 aaKnown RBP7.66□□□□□ -1.18
SNHG1-225ENST00000545920 RBM43Q6ZSC3 357 aaKnown RBP7.66□□□□□ -1.18
SNHG1-225ENST00000545920 PDCL2Q8N4E4 241 aa7.66□□□□□ -1.18
SNHG1-225ENST00000545920 HELBQ8NG08 1087 aaPredicted RBP7.66□□□□□ -1.18
SNHG1-225ENST00000545920 CCDC94Q9BW85 323 aaPredicted RBP7.66□□□□□ -1.18
SNHG1-225ENST00000545920 UPF3BQ9BZI7 483 aaKnown RBP7.66□□□□□ -1.18
SNHG1-225ENST00000545920 NSFL1CQ9UNZ2 370 aaKnown RBP7.66□□□□□ -1.18
SNHG1-225ENST00000545920 MTMR6Q9Y217 621 aa7.66□□□□□ -1.18
SNHG1-225ENST00000545920 NPHP3Q7Z494 1330 aa7.66□□□□□ -1.18
SNHG1-225ENST00000545920 JCADQ9P266 1359 aa7.66□□□□□ -1.18
SNHG1-225ENST00000545920 PIK3C2AO00443 1686 aa7.66□□□□□ -1.18
SNHG1-225ENST00000545920 CFAP99D6REC4 459 aa7.65□□□□□ -1.18
SNHG1-225ENST00000545920 CTAGE5O15320 804 aa7.65□□□□□ -1.18
SNHG1-225ENST00000545920 NECTIN1Q15223 517 aa7.65□□□□□ -1.18
SNHG1-225ENST00000545920 MAP3K11Q16584 847 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms