RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 Q3C1V9 767 aa9.99□□□□□ -0.81
SNHG1-223ENST00000545440 PPP2R2DQ66LE6 453 aa9.99□□□□□ -0.81
SNHG1-223ENST00000545440 LRP10Q7Z4F1 713 aa9.99□□□□□ -0.81
SNHG1-223ENST00000545440 TSR3Q9UJK0 312 aaKnown RBP9.99□□□□□ -0.81
SNHG1-223ENST00000545440 TAF1P21675 1872 aa9.99□□□□□ -0.81
SNHG1-223ENST00000545440 ZC3H4Q9UPT8 1303 aaKnown RBP9.99□□□□□ -0.81
SNHG1-223ENST00000545440 SOWAHBA6NEL2 793 aa9.98□□□□□ -0.81
SNHG1-223ENST00000545440 C6orf229H3BNL8 230 aa9.98□□□□□ -0.81
SNHG1-223ENST00000545440 APAF1O14727 1248 aa9.98□□□□□ -0.81
SNHG1-223ENST00000545440 ANP32CO43423 234 aa9.98□□□□□ -0.81
SNHG1-223ENST00000545440 HRO43593 1189 aa9.98□□□□□ -0.81
SNHG1-223ENST00000545440 SRGNP10124 158 aa9.98□□□□□ -0.81
SNHG1-223ENST00000545440 STYK1Q6J9G0 422 aa9.98□□□□□ -0.81
SNHG1-223ENST00000545440 TPTE2Q6XPS3 522 aa9.98□□□□□ -0.81
SNHG1-223ENST00000545440 TTLL7Q6ZT98 887 aa9.98□□□□□ -0.81
SNHG1-223ENST00000545440 HELBQ8NG08 1087 aaPredicted RBP9.98□□□□□ -0.81
SNHG1-223ENST00000545440 IFT57Q9NWB7 429 aa9.98□□□□□ -0.81
SNHG1-223ENST00000545440 HPS5Q9UPZ3 1129 aa9.98□□□□□ -0.81
SNHG1-223ENST00000545440 LRRC37AA6NMS7 1700 aa9.98□□□□□ -0.81
SNHG1-223ENST00000545440 WDR90Q96KV7 1748 aa9.98□□□□□ -0.81
SNHG1-223ENST00000545440 ABCC12Q96J65 1359 aa9.98□□□□□ -0.81
SNHG1-223ENST00000545440 SCN4AP35499 1836 aa9.98□□□□□ -0.81
SNHG1-223ENST00000545440 KLRG2A4D1S0 409 aaPredicted RBP9.97□□□□□ -0.81
SNHG1-223ENST00000545440 ZNF853P0CG23 659 aa9.97□□□□□ -0.81
SNHG1-223ENST00000545440 EIF2S2P20042 333 aaKnown RBP9.97□□□□□ -0.81
SNHG1-223ENST00000545440 C1QTNF8P60827 252 aa9.97□□□□□ -0.81
SNHG1-223ENST00000545440 FUT2Q10981 343 aa9.97□□□□□ -0.81
SNHG1-223ENST00000545440 MTMR2Q13614 643 aa9.97□□□□□ -0.81
SNHG1-223ENST00000545440 CCDC184Q52MB2 194 aa9.97□□□□□ -0.81
SNHG1-223ENST00000545440 CCDC24Q8N4L8 307 aa9.97□□□□□ -0.81
SNHG1-223ENST00000545440 NGEFQ8N5V2 710 aa9.97□□□□□ -0.81
SNHG1-223ENST00000545440 CNKSR1Q969H4 720 aa9.97□□□□□ -0.81
SNHG1-223ENST00000545440 MASTLQ96GX5 879 aa9.97□□□□□ -0.81
SNHG1-223ENST00000545440 NYXQ9GZU5 481 aa9.97□□□□□ -0.81
SNHG1-223ENST00000545440 LAS1LQ9Y4W2 734 aaKnown RBP9.97□□□□□ -0.81
SNHG1-223ENST00000545440 UBN2Q6ZU65 1347 aa9.97□□□□□ -0.81
SNHG1-223ENST00000545440 LILRB3O75022 631 aa9.96□□□□□ -0.82
SNHG1-223ENST00000545440 AP1G2O75843 785 aa9.96□□□□□ -0.82
SNHG1-223ENST00000545440 GNAI1P63096 354 aa9.96□□□□□ -0.82
SNHG1-223ENST00000545440 KRT24Q2M2I5 525 aa9.96□□□□□ -0.82
SNHG1-223ENST00000545440 PROSER3Q2NL68 480 aa9.96□□□□□ -0.82
SNHG1-223ENST00000545440 SOGA3Q5TF21 947 aa9.96□□□□□ -0.82
SNHG1-223ENST00000545440 C9orf131Q5VYM1 1079 aa9.96□□□□□ -0.82
SNHG1-223ENST00000545440 PRPF40BQ6NWY9 871 aaKnown RBP9.96□□□□□ -0.82
SNHG1-223ENST00000545440 ZNF622Q969S3 477 aaKnown RBP eCLIP9.96□□□□□ -0.82
SNHG1-223ENST00000545440 MRS2Q9HD23 443 aa9.96□□□□□ -0.82
SNHG1-223ENST00000545440 DDX21Q9NR30 783 aaKnown RBP eCLIP9.96□□□□□ -0.821e-323■■■□□ 15.6
SNHG1-223ENST00000545440 MBIPQ9NS73 344 aa9.96□□□□□ -0.82
SNHG1-223ENST00000545440 RNF181Q9P0P0 153 aa9.96□□□□□ -0.82
SNHG1-223ENST00000545440 RNF123Q5XPI4 1314 aa9.96□□□□□ -0.82
SNHG1-223ENST00000545440 LTBP3Q9NS15 1303 aa9.96□□□□□ -0.82
SNHG1-223ENST00000545440 NFKBIEO00221 500 aa9.95□□□□□ -0.82
SNHG1-223ENST00000545440 ACTN4O43707 911 aaKnown RBP9.95□□□□□ -0.82
SNHG1-223ENST00000545440 NPR1P16066 1061 aa9.95□□□□□ -0.82
SNHG1-223ENST00000545440 LMNB1P20700 586 aa9.95□□□□□ -0.82
SNHG1-223ENST00000545440 RASSF7Q02833 373 aa9.95□□□□□ -0.82
SNHG1-223ENST00000545440 CCDC27Q2M243 656 aa9.95□□□□□ -0.82
SNHG1-223ENST00000545440 CRY2Q49AN0 593 aa9.95□□□□□ -0.82
SNHG1-223ENST00000545440 PARP10Q53GL7 1025 aa9.95□□□□□ -0.82
SNHG1-223ENST00000545440 HDGFL1Q5TGJ6 251 aa9.95□□□□□ -0.82
SNHG1-223ENST00000545440 ZNF34Q8IZ26 560 aa9.95□□□□□ -0.82
SNHG1-223ENST00000545440 ZNF526Q8TF50 670 aaPredicted RBP9.95□□□□□ -0.82
SNHG1-223ENST00000545440 TSC1Q92574 1164 aa9.95□□□□□ -0.82
SNHG1-223ENST00000545440 CHPF2Q9P2E5 772 aa9.95□□□□□ -0.82
SNHG1-223ENST00000545440 SPEF2Q9C093 1822 aa9.95□□□□□ -0.82
SNHG1-223ENST00000545440 SNED1Q8TER0 1413 aa9.94□□□□□ -0.82
SNHG1-223ENST00000545440 NTSR2O95665 410 aa9.94□□□□□ -0.82
SNHG1-223ENST00000545440 ANXA1P04083 346 aa9.94□□□□□ -0.82
SNHG1-223ENST00000545440 GPTP24298 496 aa9.94□□□□□ -0.82
SNHG1-223ENST00000545440 GTF2E1P29083 439 aaPredicted RBP9.94□□□□□ -0.82
SNHG1-223ENST00000545440 MCM6Q14566 821 aa9.94□□□□□ -0.82
SNHG1-223ENST00000545440 HSP90AB3PQ58FF7 597 aa9.94□□□□□ -0.82
SNHG1-223ENST00000545440 LCE2DQ5TA82 110 aaPredicted RBP9.94□□□□□ -0.82
SNHG1-223ENST00000545440 DUSP27Q5VZP5 1158 aa9.94□□□□□ -0.82
SNHG1-223ENST00000545440 DBF4Q9UBU7 674 aaPredicted RBP9.94□□□□□ -0.82
SNHG1-223ENST00000545440 PCDHB15Q9Y5E8 787 aa9.94□□□□□ -0.82
SNHG1-223ENST00000545440 KDM2BQ8NHM5 1336 aa9.93□□□□□ -0.82
SNHG1-223ENST00000545440 FAM177BA6PVY3 158 aa9.93□□□□□ -0.82
SNHG1-223ENST00000545440 C21orf2O43822 256 aa9.93□□□□□ -0.82
SNHG1-223ENST00000545440 NR1I2O75469 434 aa9.93□□□□□ -0.82
SNHG1-223ENST00000545440 COPS6Q7L5N1 327 aa9.93□□□□□ -0.82
SNHG1-223ENST00000545440 PPP1R42Q7Z4L9 355 aa9.93□□□□□ -0.82
SNHG1-223ENST00000545440 XAGE3Q8WTP9 111 aa9.93□□□□□ -0.82
SNHG1-223ENST00000545440 TAOK3Q9H2K8 898 aa9.93□□□□□ -0.82
SNHG1-223ENST00000545440 LTBP1Q14766 1721 aa9.93□□□□□ -0.82
SNHG1-223ENST00000545440 IL16Q14005 1332 aa9.92□□□□□ -0.82
SNHG1-223ENST00000545440 ALDH1B1P30837 517 aa9.92□□□□□ -0.82
SNHG1-223ENST00000545440 PRELPP51888 382 aa9.92□□□□□ -0.82
SNHG1-223ENST00000545440 QPCTQ16769 361 aa9.92□□□□□ -0.82
SNHG1-223ENST00000545440 ERFEQ4G0M1 354 aa9.92□□□□□ -0.82
SNHG1-223ENST00000545440 CCDC93Q567U6 631 aa9.92□□□□□ -0.82
SNHG1-223ENST00000545440 SUSD4Q5VX71 490 aa9.92□□□□□ -0.82
SNHG1-223ENST00000545440 NYAP1Q6ZVC0 841 aa9.92□□□□□ -0.82
SNHG1-223ENST00000545440 PLBD2Q8NHP8 589 aa9.92□□□□□ -0.82
SNHG1-223ENST00000545440 HYPKQ9NX55 129 aa9.92□□□□□ -0.82
SNHG1-223ENST00000545440 PCDHB3Q9Y5E6 796 aa9.92□□□□□ -0.82
SNHG1-223ENST00000545440 PSME4Q14997 1843 aa9.91□□□□□ -0.82
SNHG1-223ENST00000545440 BCAMP50895 628 aa9.91□□□□□ -0.82
SNHG1-223ENST00000545440 AIMP1Q12904 312 aaKnown RBP9.91□□□□□ -0.82
SNHG1-223ENST00000545440 TCIRG1Q13488 830 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms