RNA–Protein interactions for RNA: ENST00000545046.5

CHFR-224, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,186 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-224ENST00000545046 WDR33Q9C0J8 1336 aaKnown RBP19.82■□□□□ 0.76
CHFR-224ENST00000545046 RPS6KA4O75676 772 aa19.82■□□□□ 0.76
CHFR-224ENST00000545046 LARGE1O95461 756 aa19.82■□□□□ 0.76
CHFR-224ENST00000545046 SLC5A1P13866 664 aa19.82■□□□□ 0.76
CHFR-224ENST00000545046 MCAMP43121 646 aa19.82■□□□□ 0.76
CHFR-224ENST00000545046 ZSCAN25Q6NSZ9 544 aa19.82■□□□□ 0.76
CHFR-224ENST00000545046 CCDC83Q8IWF9 413 aa19.82■□□□□ 0.76
CHFR-224ENST00000545046 HSPD1P10809 573 aaKnown RBP19.81■□□□□ 0.76
CHFR-224ENST00000545046 HSPA1LP34931 641 aa19.81■□□□□ 0.76
CHFR-224ENST00000545046 FAM182BQ5T319 152 aa19.81■□□□□ 0.76
CHFR-224ENST00000545046 M0R2C6 588 aa19.81■□□□□ 0.76
CHFR-224ENST00000545046 FGFR2P21802 821 aa19.81■□□□□ 0.76
CHFR-224ENST00000545046 CCDC102BQ68D86 513 aa19.81■□□□□ 0.76
CHFR-224ENST00000545046 OSBP2Q969R2 916 aa19.81■□□□□ 0.76
CHFR-224ENST00000545046 CCNL1Q9UK58 526 aaPredicted RBP19.81■□□□□ 0.76
CHFR-224ENST00000545046 SCN7AQ01118 1682 aa19.81■□□□□ 0.76
CHFR-224ENST00000545046 SBF2Q86WG5 1849 aa19.81■□□□□ 0.76
CHFR-224ENST00000545046 ARID4AP29374 1257 aaPredicted RBP19.8■□□□□ 0.76
CHFR-224ENST00000545046 ME3Q16798 604 aa19.8■□□□□ 0.76
CHFR-224ENST00000545046 PI16Q6UXB8 463 aa19.8■□□□□ 0.76
CHFR-224ENST00000545046 TPCN1Q9ULQ1 816 aa19.8■□□□□ 0.76
CHFR-224ENST00000545046 LAMA4Q16363 1823 aa19.8■□□□□ 0.76
CHFR-224ENST00000545046 HMGB1P09429 215 aaKnown RBP19.8■□□□□ 0.76
CHFR-224ENST00000545046 APPBP2Q92624 585 aa19.8■□□□□ 0.76
CHFR-224ENST00000545046 CDC5LQ99459 802 aaKnown RBP19.8■□□□□ 0.76
CHFR-224ENST00000545046 NARFQ9UHQ1 456 aa19.8■□□□□ 0.76
CHFR-224ENST00000545046 DDX49Q9Y6V7 483 aaKnown RBP19.8■□□□□ 0.76
CHFR-224ENST00000545046 PHKA1P46020 1223 aa19.79■□□□□ 0.76
CHFR-224ENST00000545046 ERFEQ4G0M1 354 aa19.79■□□□□ 0.76
CHFR-224ENST00000545046 TRPC5Q9UL62 973 aaPredicted RBP19.79■□□□□ 0.76
CHFR-224ENST00000545046 ZPR1O75312 459 aa19.78■□□□□ 0.76
CHFR-224ENST00000545046 GTF2E1P29083 439 aaPredicted RBP19.78■□□□□ 0.76
CHFR-224ENST00000545046 BICDL1Q6ZP65 573 aa19.78■□□□□ 0.76
CHFR-224ENST00000545046 TCEANC2Q96MN5 208 aa19.78■□□□□ 0.76
CHFR-224ENST00000545046 LMBRD1Q9NUN5 540 aa19.78■□□□□ 0.76
CHFR-224ENST00000545046 LY75O60449 1722 aa19.78■□□□□ 0.76
CHFR-224ENST00000545046 TAF1LQ8IZX4 1826 aa19.78■□□□□ 0.76
CHFR-224ENST00000545046 GNPATO15228 680 aa19.78■□□□□ 0.76
CHFR-224ENST00000545046 TOB2Q14106 344 aaPredicted RBP19.78■□□□□ 0.76
CHFR-224ENST00000545046 KLHL40Q2TBA0 621 aa19.78■□□□□ 0.76
CHFR-224ENST00000545046 L1TD1Q5T7N2 865 aaKnown RBP19.78■□□□□ 0.76
CHFR-224ENST00000545046 CTNNA3Q9UI47 895 aa19.78■□□□□ 0.76
CHFR-224ENST00000545046 RTCBQ9Y3I0 505 aaKnown RBP19.78■□□□□ 0.76
CHFR-224ENST00000545046 CASZ1Q86V15 1759 aa19.78■□□□□ 0.76
CHFR-224ENST00000545046 ONECUT3O60422 494 aaPredicted RBP19.77■□□□□ 0.76
CHFR-224ENST00000545046 GJB2P29033 226 aa19.77■□□□□ 0.76
CHFR-224ENST00000545046 TBC1D9BQ66K14 1250 aa19.77■□□□□ 0.76
CHFR-224ENST00000545046 NYXQ9GZU5 481 aa19.77■□□□□ 0.76
CHFR-224ENST00000545046 MYO5AQ9Y4I1 1855 aaKnown RBP19.77■□□□□ 0.76
CHFR-224ENST00000545046 COL9A3Q14050 684 aaPredicted RBP19.77■□□□□ 0.75
CHFR-224ENST00000545046 NECAB1Q8N987 351 aa19.77■□□□□ 0.75
CHFR-224ENST00000545046 ATRNO75882 1429 aa19.76■□□□□ 0.75
CHFR-224ENST00000545046 GOLGA6L3A6NEY3 463 aa19.76■□□□□ 0.75
CHFR-224ENST00000545046 STX6O43752 255 aa19.76■□□□□ 0.75
CHFR-224ENST00000545046 PRPF40AO75400 957 aaKnown RBP19.76■□□□□ 0.75
CHFR-224ENST00000545046 SF3B3Q15393 1217 aaKnown RBP19.76■□□□□ 0.75
CHFR-224ENST00000545046 SETDB2Q96T68 719 aa19.76■□□□□ 0.75
CHFR-224ENST00000545046 SYT1P21579 422 aa19.76■□□□□ 0.75
CHFR-224ENST00000545046 SLC9C2Q5TAH2 1124 aa19.76■□□□□ 0.75
CHFR-224ENST00000545046 Q6ZUG5 572 aa19.76■□□□□ 0.75
CHFR-224ENST00000545046 ANKRD18AQ8IVF6 992 aa19.76■□□□□ 0.75
CHFR-224ENST00000545046 BCL2L12Q9HB09 334 aa19.76■□□□□ 0.75
CHFR-224ENST00000545046 ZSCAN22P10073 491 aaPredicted RBP19.75■□□□□ 0.75
CHFR-224ENST00000545046 ADD2P35612 726 aa19.75■□□□□ 0.75
CHFR-224ENST00000545046 CHRNDQ07001 517 aa19.75■□□□□ 0.75
CHFR-224ENST00000545046 SMIM5Q71RC9 77 aa19.75■□□□□ 0.75
CHFR-224ENST00000545046 SEPT12Q8IYM1 358 aa19.75■□□□□ 0.75
CHFR-224ENST00000545046 PUS7LQ9H0K6 701 aaKnown RBP19.75■□□□□ 0.75
CHFR-224ENST00000545046 IDH1O75874 414 aaKnown RBP19.74■□□□□ 0.75
CHFR-224ENST00000545046 FGD1P98174 961 aa19.74■□□□□ 0.75
CHFR-224ENST00000545046 SLC10A5Q5PT55 438 aa19.74■□□□□ 0.75
CHFR-224ENST00000545046 STOX1Q6ZVD7 989 aa19.74■□□□□ 0.75
CHFR-224ENST00000545046 DHX32Q7L7V1 743 aaKnown RBP19.74■□□□□ 0.75
CHFR-224ENST00000545046 SPATA5Q8NB90 893 aa19.74■□□□□ 0.75
CHFR-224ENST00000545046 PIH1D3Q9NQM4 214 aaKnown RBP19.74■□□□□ 0.75
CHFR-224ENST00000545046 SRP68Q9UHB9 627 aaKnown RBP19.74■□□□□ 0.75
CHFR-224ENST00000545046 E7EWF7 191 aa19.74■□□□□ 0.75
CHFR-224ENST00000545046 PDIA4P13667 645 aaKnown RBP19.74■□□□□ 0.75
CHFR-224ENST00000545046 ST3GAL1Q11201 340 aa19.74■□□□□ 0.75
CHFR-224ENST00000545046 UBE3CQ15386 1083 aa19.74■□□□□ 0.75
CHFR-224ENST00000545046 GPAA1O43292 621 aa19.73■□□□□ 0.75
CHFR-224ENST00000545046 NCLP19338 710 aaKnown RBP19.73■□□□□ 0.75
CHFR-224ENST00000545046 IMMTQ16891 758 aaKnown RBP19.73■□□□□ 0.75
CHFR-224ENST00000545046 SNAP23O00161 211 aa19.73■□□□□ 0.75
CHFR-224ENST00000545046 NBPF5PQ86XG9 351 aaPredicted RBP19.73■□□□□ 0.75
CHFR-224ENST00000545046 ARHGEF1Q92888 912 aaKnown RBP19.72■□□□□ 0.75
CHFR-224ENST00000545046 ATP6V1DQ9Y5K8 247 aa19.72■□□□□ 0.75
CHFR-224ENST00000545046 COL24A1Q17RW2 1714 aa19.72■□□□□ 0.75
CHFR-224ENST00000545046 TAF1P21675 1872 aa19.72■□□□□ 0.75
CHFR-224ENST00000545046 C4BP0C0L5 1744 aa19.71■□□□□ 0.75
CHFR-224ENST00000545046 STK3Q13188 491 aa19.71■□□□□ 0.75
CHFR-224ENST00000545046 TPTE2Q6XPS3 522 aa19.71■□□□□ 0.75
CHFR-224ENST00000545046 BSDC1Q9NW68 430 aaPredicted RBP19.71■□□□□ 0.75
CHFR-224ENST00000545046 ISY1Q9ULR0 285 aaKnown RBP19.71■□□□□ 0.75
CHFR-224ENST00000545046 TCHHQ07283 1943 aa19.71■□□□□ 0.75
CHFR-224ENST00000545046 DOCK2Q92608 1830 aa19.71■□□□□ 0.75
CHFR-224ENST00000545046 ZNF532Q9HCE3 1301 aa19.71■□□□□ 0.75
CHFR-224ENST00000545046 FSD2A1L4K1 749 aa19.71■□□□□ 0.75
CHFR-224ENST00000545046 FGAP02671 866 aa19.71■□□□□ 0.75
CHFR-224ENST00000545046 MAP3K12Q12852 859 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms