RNA–Protein interactions for RNA: ENST00000544972.1

TNC-213, Transcript of tenascin C, humanhuman

TSL 5

Gene TNC, Length 1,844 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-213ENST00000544972 SF3B2Q13435 895 aaKnown RBP13.73□□□□□ -0.21
TNC-213ENST00000544972 STK32BQ9NY57 414 aa13.73□□□□□ -0.21
TNC-213ENST00000544972 PALD1Q9ULE6 856 aa13.73□□□□□ -0.21
TNC-213ENST00000544972 MMP10P09238 476 aa13.72□□□□□ -0.21
TNC-213ENST00000544972 UQCRFS1P1P0C7P4 283 aa13.72□□□□□ -0.21
TNC-213ENST00000544972 HSPA4P34932 840 aa13.72□□□□□ -0.21
TNC-213ENST00000544972 BCAMP50895 628 aa13.72□□□□□ -0.21
TNC-213ENST00000544972 PTH1RQ03431 593 aa13.72□□□□□ -0.21
TNC-213ENST00000544972 SLFNL1Q499Z3 407 aa13.72□□□□□ -0.21
TNC-213ENST00000544972 ZNF589Q86UQ0 364 aaPredicted RBP13.72□□□□□ -0.21
TNC-213ENST00000544972 SLC51AQ86UW1 340 aa13.72□□□□□ -0.21
TNC-213ENST00000544972 IL17RAQ96F46 866 aa13.72□□□□□ -0.21
TNC-213ENST00000544972 MYO5AQ9Y4I1 1855 aaKnown RBP13.72□□□□□ -0.21
TNC-213ENST00000544972 CYP2E1P05181 493 aaPredicted RBP13.71□□□□□ -0.21
TNC-213ENST00000544972 HOXA10P31260 410 aaPredicted RBP13.71□□□□□ -0.21
TNC-213ENST00000544972 MSL1Q68DK7 614 aa13.71□□□□□ -0.21
TNC-213ENST00000544972 KIAA1211Q6ZU35 1233 aa13.71□□□□□ -0.21
TNC-213ENST00000544972 RPGRQ92834 1020 aaKnown RBP13.71□□□□□ -0.21
TNC-213ENST00000544972 SEC62Q99442 399 aaKnown RBP13.71□□□□□ -0.21
TNC-213ENST00000544972 HMG20BQ9P0W2 317 aa13.71□□□□□ -0.21
TNC-213ENST00000544972 ZNF804BA4D1E1 1349 aa13.71□□□□□ -0.22
TNC-213ENST00000544972 CCDC171Q6TFL3 1326 aa13.71□□□□□ -0.22
TNC-213ENST00000544972 RASGRF1Q13972 1273 aa13.71□□□□□ -0.22
TNC-213ENST00000544972 SNX21Q969T3 373 aa13.71□□□□□ -0.22
TNC-213ENST00000544972 BRIP1Q9BX63 1249 aa13.71□□□□□ -0.22
TNC-213ENST00000544972 ANKRD2Q9GZV1 360 aa13.71□□□□□ -0.22
TNC-213ENST00000544972 MYH7P12883 1935 aa13.71□□□□□ -0.22
TNC-213ENST00000544972 RNF113AO15541 343 aaKnown RBP13.7□□□□□ -0.22
TNC-213ENST00000544972 CD2BP2O95400 341 aaKnown RBP13.7□□□□□ -0.22
TNC-213ENST00000544972 ANAPC15P60006 121 aa13.7□□□□□ -0.22
TNC-213ENST00000544972 BECN1Q14457 450 aa13.7□□□□□ -0.22
TNC-213ENST00000544972 RABEP1Q15276 862 aa13.7□□□□□ -0.22
TNC-213ENST00000544972 ZMYM1Q5SVZ6 1142 aa13.7□□□□□ -0.22
TNC-213ENST00000544972 SPATA5Q8NB90 893 aa13.7□□□□□ -0.22
TNC-213ENST00000544972 MAP4K1Q92918 833 aa13.7□□□□□ -0.22
TNC-213ENST00000544972 RBM17Q96I25 401 aaKnown RBP13.7□□□□□ -0.22
TNC-213ENST00000544972 PARP3Q9Y6F1 533 aa13.7□□□□□ -0.22
TNC-213ENST00000544972 MCCP23508 829 aa13.69□□□□□ -0.22
TNC-213ENST00000544972 KLRK1P26718 216 aa13.69□□□□□ -0.22
TNC-213ENST00000544972 GYG1P46976 350 aa13.69□□□□□ -0.22
TNC-213ENST00000544972 MCMDC2Q4G0Z9 681 aa13.69□□□□□ -0.22
TNC-213ENST00000544972 ILDR1Q86SU0 546 aaPredicted RBP13.69□□□□□ -0.22
TNC-213ENST00000544972 CRAMP1Q96RY5 1269 aa13.69□□□□□ -0.22
TNC-213ENST00000544972 PIH1D3Q9NQM4 214 aaKnown RBP13.69□□□□□ -0.22
TNC-213ENST00000544972 IRS2Q9Y4H2 1338 aa13.69□□□□□ -0.22
TNC-213ENST00000544972 NECTIN1Q15223 517 aa13.69□□□□□ -0.22
TNC-213ENST00000544972 CCDC129Q6ZRS4 1044 aa13.69□□□□□ -0.22
TNC-213ENST00000544972 RASEFQ8IZ41 740 aa13.69□□□□□ -0.22
TNC-213ENST00000544972 FAM84BQ96KN1 310 aaPredicted RBP13.69□□□□□ -0.22
TNC-213ENST00000544972 PDGFDQ9GZP0 370 aaPredicted RBP13.69□□□□□ -0.22
TNC-213ENST00000544972 HELLSQ9NRZ9 838 aa13.69□□□□□ -0.22
TNC-213ENST00000544972 DOCK2Q92608 1830 aa13.69□□□□□ -0.22
TNC-213ENST00000544972 TTF1Q15361 905 aaPredicted RBP13.68□□□□□ -0.22
TNC-213ENST00000544972 FBXO33Q7Z6M2 555 aa13.68□□□□□ -0.22
TNC-213ENST00000544972 KCNB2Q92953 911 aa13.68□□□□□ -0.22
TNC-213ENST00000544972 COL11A2P13942 1736 aaPredicted RBP13.67□□□□□ -0.22
TNC-213ENST00000544972 COL1A1P02452 1464 aaPredicted RBP13.67□□□□□ -0.22
TNC-213ENST00000544972 BBOX1O75936 387 aa13.67□□□□□ -0.22
TNC-213ENST00000544972 ZFYP08048 801 aaPredicted RBP13.67□□□□□ -0.22
TNC-213ENST00000544972 SRGNP10124 158 aa13.67□□□□□ -0.22
TNC-213ENST00000544972 OSBP2Q969R2 916 aa13.67□□□□□ -0.22
TNC-213ENST00000544972 DAXXQ9UER7 740 aaPredicted RBP13.67□□□□□ -0.22
TNC-213ENST00000544972 RBM8AQ9Y5S9 174 aaKnown RBP13.67□□□□□ -0.22
TNC-213ENST00000544972 SNX14Q9Y5W7 946 aa13.67□□□□□ -0.22
TNC-213ENST00000544972 MAST3O60307 1309 aa13.67□□□□□ -0.22
TNC-213ENST00000544972 KCNJ4P48050 445 aa13.67□□□□□ -0.22
TNC-213ENST00000544972 CAVIN4Q5BKX8 364 aa13.67□□□□□ -0.22
TNC-213ENST00000544972 TXNRD3Q86VQ6 643 aa13.67□□□□□ -0.22
TNC-213ENST00000544972 CCDC125Q86Z20 511 aa13.67□□□□□ -0.22
TNC-213ENST00000544972 LRRC37AA6NMS7 1700 aa13.66□□□□□ -0.22
TNC-213ENST00000544972 XDHP47989 1333 aa13.66□□□□□ -0.22
TNC-213ENST00000544972 M0R2C6 588 aa13.66□□□□□ -0.22
TNC-213ENST00000544972 ADD2P35612 726 aa13.66□□□□□ -0.22
TNC-213ENST00000544972 LRRFIP1Q32MZ4 808 aaKnown RBP13.66□□□□□ -0.22
TNC-213ENST00000544972 PRPF40BQ6NWY9 871 aaKnown RBP13.66□□□□□ -0.22
TNC-213ENST00000544972 HSCBQ8IWL3 235 aa13.66□□□□□ -0.22
TNC-213ENST00000544972 ANKIB1Q9P2G1 1089 aa13.66□□□□□ -0.22
TNC-213ENST00000544972 IQSEC3Q9UPP2 1182 aaPredicted RBP13.66□□□□□ -0.22
TNC-213ENST00000544972 LEMD3Q9Y2U8 911 aa13.66□□□□□ -0.22
TNC-213ENST00000544972 LTBP1Q14766 1721 aa13.65□□□□□ -0.22
TNC-213ENST00000544972 IDH1O75874 414 aaKnown RBP13.65□□□□□ -0.22
TNC-213ENST00000544972 PDE6BP35913 854 aa13.65□□□□□ -0.22
TNC-213ENST00000544972 GPSM2P81274 684 aa13.65□□□□□ -0.22
TNC-213ENST00000544972 SLC9C2Q5TAH2 1124 aa13.65□□□□□ -0.22
TNC-213ENST00000544972 APPBP2Q92624 585 aa13.65□□□□□ -0.22
TNC-213ENST00000544972 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.65□□□□□ -0.22
TNC-213ENST00000544972 GNL3LQ9NVN8 582 aaKnown RBP13.65□□□□□ -0.22
TNC-213ENST00000544972 WWC3Q9ULE0 1092 aa13.65□□□□□ -0.22
TNC-213ENST00000544972 TCRBV5S4A2TA0A5A2 114 aa13.64□□□□□ -0.23
TNC-213ENST00000544972 NPR1P16066 1061 aa13.64□□□□□ -0.23
TNC-213ENST00000544972 VPS53Q5VIR6 699 aa13.64□□□□□ -0.23
TNC-213ENST00000544972 CREB3L3Q68CJ9 461 aa13.64□□□□□ -0.23
TNC-213ENST00000544972 PUS7LQ9H0K6 701 aaKnown RBP13.64□□□□□ -0.23
TNC-213ENST00000544972 SLC27A2O14975 620 aa13.64□□□□□ -0.23
TNC-213ENST00000544972 ZBTB22O15209 634 aa13.64□□□□□ -0.23
TNC-213ENST00000544972 PDE6AP16499 860 aa13.64□□□□□ -0.23
TNC-213ENST00000544972 HIBADHP31937 336 aaKnown RBP13.64□□□□□ -0.23
TNC-213ENST00000544972 NEK4P51957 841 aa13.64□□□□□ -0.23
TNC-213ENST00000544972 UBE3CQ15386 1083 aa13.64□□□□□ -0.23
TNC-213ENST00000544972 ZSCAN25Q6NSZ9 544 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms