RNA–Protein interactions for RNA: ENST00000544800.1

CIT-215, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-215ENST00000544800 IL27Q8NEV9 243 aa9.52□□□□□ -0.89
CIT-215ENST00000544800 MS4A3Q96HJ5 214 aa9.52□□□□□ -0.89
CIT-215ENST00000544800 PAWRQ96IZ0 340 aaKnown RBP9.52□□□□□ -0.89
CIT-215ENST00000544800 PTPN18Q99952 460 aa9.52□□□□□ -0.89
CIT-215ENST00000544800 ZFYVE28Q9HCC9 887 aa9.52□□□□□ -0.89
CIT-215ENST00000544800 BIN2Q9UBW5 565 aaPredicted RBP9.52□□□□□ -0.89
CIT-215ENST00000544800 COL2A1P02458 1487 aaPredicted RBP9.52□□□□□ -0.89
CIT-215ENST00000544800 TESPA1A2RU30 521 aaPredicted RBP9.51□□□□□ -0.89
CIT-215ENST00000544800 GPR37L1O60883 481 aa9.51□□□□□ -0.89
CIT-215ENST00000544800 ZNF280AP59817 542 aaPredicted RBP9.51□□□□□ -0.89
CIT-215ENST00000544800 WNK4Q96J92 1243 aa9.51□□□□□ -0.89
CIT-215ENST00000544800 TRIM47Q96LD4 638 aa9.51□□□□□ -0.89
CIT-215ENST00000544800 NYXQ9GZU5 481 aa9.51□□□□□ -0.89
CIT-215ENST00000544800 RIPOR2Q9Y4F9 1068 aa9.51□□□□□ -0.89
CIT-215ENST00000544800 RIC1Q4ADV7 1423 aa9.5□□□□□ -0.89
CIT-215ENST00000544800 A1BGP04217 495 aa9.5□□□□□ -0.89
CIT-215ENST00000544800 TNNT2P45379 298 aaPredicted RBP9.5□□□□□ -0.89
CIT-215ENST00000544800 LACTBP83111 547 aaPredicted RBP9.5□□□□□ -0.89
CIT-215ENST00000544800 PRKG1Q13976 671 aa9.5□□□□□ -0.89
CIT-215ENST00000544800 EIF4A2Q14240 407 aaKnown RBP9.5□□□□□ -0.89
CIT-215ENST00000544800 SP8Q8IXZ3 490 aa9.5□□□□□ -0.89
CIT-215ENST00000544800 RAET1EQ8TD07 263 aa9.5□□□□□ -0.89
CIT-215ENST00000544800 ARHGAP39Q9C0H5 1083 aa9.5□□□□□ -0.89
CIT-215ENST00000544800 EPHX3Q9H6B9 360 aa9.5□□□□□ -0.89
CIT-215ENST00000544800 SCAF8Q9UPN6 1271 aaKnown RBP9.5□□□□□ -0.89
CIT-215ENST00000544800 UNCXA6NJT0 531 aa9.49□□□□□ -0.89
CIT-215ENST00000544800 BBOX1O75936 387 aa9.49□□□□□ -0.89
CIT-215ENST00000544800 VIL1P09327 827 aaKnown RBP9.49□□□□□ -0.89
CIT-215ENST00000544800 HOXD10P28358 340 aa9.49□□□□□ -0.89
CIT-215ENST00000544800 TAF1CQ15572 869 aaPredicted RBP9.49□□□□□ -0.89
CIT-215ENST00000544800 TTC5Q8N0Z6 440 aa9.49□□□□□ -0.89
CIT-215ENST00000544800 UNC93B1Q9H1C4 597 aa9.49□□□□□ -0.89
CIT-215ENST00000544800 TTYH1Q9H313 450 aaPredicted RBP9.49□□□□□ -0.89
CIT-215ENST00000544800 LGR6Q9HBX8 967 aa9.49□□□□□ -0.89
CIT-215ENST00000544800 THEGQ9P2T0 379 aa9.49□□□□□ -0.89
CIT-215ENST00000544800 SRRDQ9UH36 339 aa9.49□□□□□ -0.89
CIT-215ENST00000544800 ANGEL1Q9UNK9 670 aaKnown RBP9.49□□□□□ -0.89
CIT-215ENST00000544800 CDH23Q9H251 3354 aa9.48□□□□□ -0.89
CIT-215ENST00000544800 NHLH1Q02575 133 aa9.48□□□□□ -0.89
CIT-215ENST00000544800 MIER1Q8N108 512 aa9.48□□□□□ -0.89
CIT-215ENST00000544800 DBNDD1Q9H9R9 158 aa9.48□□□□□ -0.89
CIT-215ENST00000544800 KCNQ5Q9NR82 932 aa9.48□□□□□ -0.89
CIT-215ENST00000544800 ABCC12Q96J65 1359 aa9.48□□□□□ -0.89
CIT-215ENST00000544800 SSC5DA1L4H1 1573 aa9.47□□□□□ -0.89
CIT-215ENST00000544800 ST18O60284 1047 aa9.47□□□□□ -0.89
CIT-215ENST00000544800 WDHD1O75717 1129 aaPredicted RBP9.47□□□□□ -0.89
CIT-215ENST00000544800 WASHC4Q2M389 1173 aa9.47□□□□□ -0.89
CIT-215ENST00000544800 AGBL3Q8NEM8 1001 aa9.47□□□□□ -0.89
CIT-215ENST00000544800 MYOZ2Q9NPC6 264 aa9.47□□□□□ -0.89
CIT-215ENST00000544800 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.47□□□□□ -0.89
CIT-215ENST00000544800 ROCK2O75116 1388 aaKnown RBP9.47□□□□□ -0.89
CIT-215ENST00000544800 RTL9Q8NET4 1388 aa9.47□□□□□ -0.89
CIT-215ENST00000544800 SMIM22K7EJ46 135 aa9.46□□□□□ -0.9
CIT-215ENST00000544800 RNMTO43148 476 aaKnown RBP9.46□□□□□ -0.9
CIT-215ENST00000544800 MAP3K11Q16584 847 aa9.46□□□□□ -0.9
CIT-215ENST00000544800 HELBQ8NG08 1087 aaPredicted RBP9.46□□□□□ -0.9
CIT-215ENST00000544800 CLMNQ96JQ2 1002 aa9.46□□□□□ -0.9
CIT-215ENST00000544800 CRISPLD2Q9H0B8 497 aa9.46□□□□□ -0.9
CIT-215ENST00000544800 ECE2O60344 883 aa9.45□□□□□ -0.9
CIT-215ENST00000544800 TLR2O60603 784 aa9.45□□□□□ -0.9
CIT-215ENST00000544800 MDM2Q00987 491 aaPredicted RBP9.45□□□□□ -0.9
CIT-215ENST00000544800 ANKLE1Q8NAG6 615 aa9.45□□□□□ -0.9
CIT-215ENST00000544800 DIS3LQ8TF46 1054 aaKnown RBP9.45□□□□□ -0.9
CIT-215ENST00000544800 DEFB118Q96PH6 123 aa9.45□□□□□ -0.9
CIT-215ENST00000544800 NBPF3Q9H094 633 aa9.45□□□□□ -0.9
CIT-215ENST00000544800 HEG1Q9ULI3 1381 aa9.45□□□□□ -0.9
CIT-215ENST00000544800 USP17L8P0C7I0 530 aa9.44□□□□□ -0.9
CIT-215ENST00000544800 SMAD3P84022 425 aaKnown RBP9.44□□□□□ -0.9
CIT-215ENST00000544800 SLAIN1Q8ND83 568 aa9.44□□□□□ -0.9
CIT-215ENST00000544800 NECAB3Q96P71 396 aaPredicted RBP9.44□□□□□ -0.9
CIT-215ENST00000544800 C11orf16Q9NQ32 467 aa9.44□□□□□ -0.9
CIT-215ENST00000544800 POLKQ9UBT6 870 aa9.44□□□□□ -0.9
CIT-215ENST00000544800 ALPK3Q96L96 1907 aa9.44□□□□□ -0.9
CIT-215ENST00000544800 SPTBN4Q9H254 2564 aa9.44□□□□□ -0.9
CIT-215ENST00000544800 EPG5Q9HCE0 2579 aa9.43□□□□□ -0.9
CIT-215ENST00000544800 NBPF26B4DH59 902 aa9.43□□□□□ -0.9
CIT-215ENST00000544800 PPP1R12BO60237 982 aaPredicted RBP9.43□□□□□ -0.9
CIT-215ENST00000544800 RGS20O76081 388 aa9.43□□□□□ -0.9
CIT-215ENST00000544800 BMP1P13497 986 aa9.43□□□□□ -0.9
CIT-215ENST00000544800 OSBPP22059 807 aa9.43□□□□□ -0.9
CIT-215ENST00000544800 GJA5P36382 358 aa9.43□□□□□ -0.9
CIT-215ENST00000544800 PSMC4P43686 418 aa9.43□□□□□ -0.9
CIT-215ENST00000544800 NBPF9Q3BBW0 867 aa9.43□□□□□ -0.9
CIT-215ENST00000544800 MS4A4AQ96JQ5 239 aa9.43□□□□□ -0.9
CIT-215ENST00000544800 NLRP3Q96P20 1036 aa9.43□□□□□ -0.9
CIT-215ENST00000544800 KCNH6Q9H252 994 aa9.43□□□□□ -0.9
CIT-215ENST00000544800 ABCC4O15439 1325 aa9.42□□□□□ -0.9
CIT-215ENST00000544800 RIMBP2O15034 1052 aa9.42□□□□□ -0.9
CIT-215ENST00000544800 KRT37O76014 449 aa9.42□□□□□ -0.9
CIT-215ENST00000544800 FMNL1O95466 1100 aaPredicted RBP9.42□□□□□ -0.9
CIT-215ENST00000544800 HLFQ16534 295 aa9.42□□□□□ -0.9
CIT-215ENST00000544800 DOK7Q18PE1 504 aa9.42□□□□□ -0.9
CIT-215ENST00000544800 RSBN1LQ6PCB5 846 aaPredicted RBP9.42□□□□□ -0.9
CIT-215ENST00000544800 C3orf67Q6ZVT6 689 aa9.42□□□□□ -0.9
CIT-215ENST00000544800 RASEFQ8IZ41 740 aa9.42□□□□□ -0.9
CIT-215ENST00000544800 PPM1EQ8WY54 764 aa9.42□□□□□ -0.9
CIT-215ENST00000544800 LBHD1Q9BQE6 289 aaPredicted RBP9.42□□□□□ -0.9
CIT-215ENST00000544800 PAK6Q9NQU5 681 aaPredicted RBP9.42□□□□□ -0.9
CIT-215ENST00000544800 ATRXP46100 2492 aa9.42□□□□□ -0.9
CIT-215ENST00000544800 CFAP54Q96N23 3096 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms