RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 PPEF1O14829 653 aaPredicted RBP8.6□□□□□ -1.03
CPSF7-222ENST00000544585 P4HBP07237 508 aaKnown RBP8.6□□□□□ -1.03
CPSF7-222ENST00000544585 FGD1P98174 961 aa8.6□□□□□ -1.03
CPSF7-222ENST00000544585 ALKBH2Q6NS38 261 aa8.6□□□□□ -1.03
CPSF7-222ENST00000544585 EHBP1Q8NDI1 1231 aa8.6□□□□□ -1.03
CPSF7-222ENST00000544585 CITED4Q96RK1 184 aa8.6□□□□□ -1.03
CPSF7-222ENST00000544585 TMPRSS4Q9NRS4 437 aa8.6□□□□□ -1.03
CPSF7-222ENST00000544585 CABP1Q9NZU7 370 aa8.6□□□□□ -1.03
CPSF7-222ENST00000544585 NUP188Q5SRE5 1749 aa8.6□□□□□ -1.03
CPSF7-222ENST00000544585 POTEMA6NI47 508 aa8.59□□□□□ -1.03
CPSF7-222ENST00000544585 STAU1O95793 577 aaKnown RBP8.59□□□□□ -1.03
CPSF7-222ENST00000544585 FSHRP23945 695 aa8.59□□□□□ -1.03
CPSF7-222ENST00000544585 EPHA4P54764 986 aa8.59□□□□□ -1.03
CPSF7-222ENST00000544585 CYP2U1Q7Z449 544 aa8.59□□□□□ -1.03
CPSF7-222ENST00000544585 ARHGEF25Q86VW2 580 aa8.59□□□□□ -1.03
CPSF7-222ENST00000544585 ETNK1Q9HBU6 452 aa8.59□□□□□ -1.03
CPSF7-222ENST00000544585 COL5A2P05997 1499 aaPredicted RBP8.58□□□□□ -1.04
CPSF7-222ENST00000544585 A0A1W2PRU2 124 aa8.58□□□□□ -1.04
CPSF7-222ENST00000544585 POLD1P28340 1107 aa8.58□□□□□ -1.04
CPSF7-222ENST00000544585 SKOR1P84550 965 aa8.58□□□□□ -1.04
CPSF7-222ENST00000544585 DRC1Q96MC2 740 aa8.58□□□□□ -1.04
CPSF7-222ENST00000544585 SLC4A9Q96Q91 983 aa8.58□□□□□ -1.04
CPSF7-222ENST00000544585 SAP130Q9H0E3 1048 aa8.58□□□□□ -1.04
CPSF7-222ENST00000544585 STIM2Q9P246 746 aa8.58□□□□□ -1.04
CPSF7-222ENST00000544585 CHMP3Q9Y3E7 222 aa8.58□□□□□ -1.04
CPSF7-222ENST00000544585 MAP3K5Q99683 1374 aa8.58□□□□□ -1.04
CPSF7-222ENST00000544585 CRYBG1Q9Y4K1 1723 aa8.57□□□□□ -1.04
CPSF7-222ENST00000544585 TREHO43280 583 aa8.57□□□□□ -1.04
CPSF7-222ENST00000544585 GRIN3BO60391 1043 aa8.57□□□□□ -1.04
CPSF7-222ENST00000544585 GNRH1P01148 92 aa8.57□□□□□ -1.04
CPSF7-222ENST00000544585 GGCXP38435 758 aa8.57□□□□□ -1.04
CPSF7-222ENST00000544585 EIF1AXP47813 144 aaKnown RBP8.57□□□□□ -1.04
CPSF7-222ENST00000544585 PLCB3Q01970 1234 aa8.57□□□□□ -1.04
CPSF7-222ENST00000544585 SLC9A9Q8IVB4 645 aa8.57□□□□□ -1.04
CPSF7-222ENST00000544585 DMRTB1Q96MA1 342 aa8.57□□□□□ -1.04
CPSF7-222ENST00000544585 CDK15Q96Q40 435 aa8.57□□□□□ -1.04
CPSF7-222ENST00000544585 BACH2Q9BYV9 841 aa8.57□□□□□ -1.04
CPSF7-222ENST00000544585 CENPJQ9HC77 1338 aaPredicted RBP8.56□□□□□ -1.04
CPSF7-222ENST00000544585 MAPK8P45983 427 aa8.56□□□□□ -1.04
CPSF7-222ENST00000544585 FMR1Q06787 632 aaKnown RBP eCLIP8.56□□□□□ -1.04
CPSF7-222ENST00000544585 TBCELQ5QJ74 424 aa8.56□□□□□ -1.04
CPSF7-222ENST00000544585 LCE2DQ5TA82 110 aaPredicted RBP8.56□□□□□ -1.04
CPSF7-222ENST00000544585 STAG2Q8N3U4 1231 aa8.56□□□□□ -1.04
CPSF7-222ENST00000544585 ANKLE1Q8NAG6 615 aa8.56□□□□□ -1.04
CPSF7-222ENST00000544585 SREK1Q8WXA9 508 aaKnown RBP8.56□□□□□ -1.04
CPSF7-222ENST00000544585 PRKD2Q9BZL6 878 aa8.56□□□□□ -1.04
CPSF7-222ENST00000544585 MRS2Q9HD23 443 aa8.56□□□□□ -1.04
CPSF7-222ENST00000544585 SCHIP1Q9P0W5 487 aaPredicted RBP8.56□□□□□ -1.04
CPSF7-222ENST00000544585 CCDC7Q96M83 1385 aa8.56□□□□□ -1.04
CPSF7-222ENST00000544585 PPIP5K1Q6PFW1 1433 aa8.55□□□□□ -1.04
CPSF7-222ENST00000544585 PARP4Q9UKK3 1724 aaKnown RBP8.55□□□□□ -1.04
CPSF7-222ENST00000544585 A6NJY4 79 aa8.55□□□□□ -1.04
CPSF7-222ENST00000544585 RNF223E7ERA6 249 aa8.55□□□□□ -1.04
CPSF7-222ENST00000544585 HMGB2P26583 209 aaKnown RBP8.55□□□□□ -1.04
CPSF7-222ENST00000544585 SMTNP53814 917 aa8.55□□□□□ -1.04
CPSF7-222ENST00000544585 PSMA6P60900 246 aaKnown RBP8.55□□□□□ -1.04
CPSF7-222ENST00000544585 NBPF1Q3BBV0 1214 aa8.55□□□□□ -1.04
CPSF7-222ENST00000544585 COX20Q5RI15 118 aa8.55□□□□□ -1.04
CPSF7-222ENST00000544585 C2orf49Q9BVC5 232 aaPredicted RBP8.55□□□□□ -1.04
CPSF7-222ENST00000544585 KRTAP3-3Q9BYR6 98 aa8.55□□□□□ -1.04
CPSF7-222ENST00000544585 KRTAP3-2Q9BYR7 98 aa8.55□□□□□ -1.04
CPSF7-222ENST00000544585 CCDC87Q9NVE4 849 aa8.55□□□□□ -1.04
CPSF7-222ENST00000544585 PHRF1Q9P1Y6 1649 aaKnown RBP8.54□□□□□ -1.04
CPSF7-222ENST00000544585 ITSN1Q15811 1721 aa8.54□□□□□ -1.04
CPSF7-222ENST00000544585 LMO7Q8WWI1 1683 aa8.54□□□□□ -1.04
CPSF7-222ENST00000544585 NRKQ7Z2Y5 1582 aa8.54□□□□□ -1.04
CPSF7-222ENST00000544585 SCAMP3O14828 347 aaKnown RBP8.54□□□□□ -1.04
CPSF7-222ENST00000544585 LDHBP07195 334 aaKnown RBP8.54□□□□□ -1.04
CPSF7-222ENST00000544585 ERCC5P28715 1186 aaPredicted RBP8.54□□□□□ -1.04
CPSF7-222ENST00000544585 GRM5P41594 1212 aa8.54□□□□□ -1.04
CPSF7-222ENST00000544585 FOXK2Q01167 660 aa8.54□□□□□ -1.04
CPSF7-222ENST00000544585 MRPL58Q14197 206 aaKnown RBP8.54□□□□□ -1.04
CPSF7-222ENST00000544585 SLC27A3Q5K4L6 730 aa8.54□□□□□ -1.04
CPSF7-222ENST00000544585 CCDC116Q8IYX3 515 aa8.54□□□□□ -1.04
CPSF7-222ENST00000544585 ACSBG1Q96GR2 724 aa8.54□□□□□ -1.04
CPSF7-222ENST00000544585 CHD4Q14839 1912 aa8.54□□□□□ -1.04
CPSF7-222ENST00000544585 TTC21BQ7Z4L5 1316 aa8.54□□□□□ -1.04
CPSF7-222ENST00000544585 TTC21AQ8NDW8 1320 aa8.54□□□□□ -1.04
CPSF7-222ENST00000544585 RGPD3A6NKT7 1758 aaPredicted RBP8.53□□□□□ -1.04
CPSF7-222ENST00000544585 RGPD4Q7Z3J3 1758 aa8.53□□□□□ -1.04
CPSF7-222ENST00000544585 RAB3GAP2Q9H2M9 1393 aa8.53□□□□□ -1.04
CPSF7-222ENST00000544585 FZD6O60353 706 aa8.53□□□□□ -1.04
CPSF7-222ENST00000544585 PRPF40AO75400 957 aaKnown RBP8.53□□□□□ -1.04
CPSF7-222ENST00000544585 CD2BP2O95400 341 aaKnown RBP8.53□□□□□ -1.04
CPSF7-222ENST00000544585 IL2RBP14784 551 aa8.53□□□□□ -1.04
CPSF7-222ENST00000544585 RPIAP49247 311 aa8.53□□□□□ -1.04
CPSF7-222ENST00000544585 ATP2B2Q01814 1243 aa8.53□□□□□ -1.04
CPSF7-222ENST00000544585 KCNC4Q03721 635 aa8.53□□□□□ -1.04
CPSF7-222ENST00000544585 EHHADHQ08426 723 aa8.53□□□□□ -1.04
CPSF7-222ENST00000544585 NAALADL2Q58DX5 795 aa8.53□□□□□ -1.04
CPSF7-222ENST00000544585 PLA2G2CQ5R387 149 aa8.53□□□□□ -1.04
CPSF7-222ENST00000544585 PPP1R26Q5T8A7 1209 aaPredicted RBP8.53□□□□□ -1.04
CPSF7-222ENST00000544585 RC3H1Q5TC82 1133 aaKnown RBP8.53□□□□□ -1.04
CPSF7-222ENST00000544585 USP6P35125 1406 aa8.53□□□□□ -1.04
CPSF7-222ENST00000544585 CASZ1Q86V15 1759 aa8.53□□□□□ -1.04
CPSF7-222ENST00000544585 EVC2Q86UK5 1308 aa8.53□□□□□ -1.04
CPSF7-222ENST00000544585 PEAK1Q9H792 1746 aa8.52□□□□□ -1.05
CPSF7-222ENST00000544585 TNFRSF10BO14763 440 aa8.52□□□□□ -1.05
CPSF7-222ENST00000544585 LILRA1O75019 489 aa8.52□□□□□ -1.05
CPSF7-222ENST00000544585 BRD2P25440 801 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms