RNA–Protein interactions for RNA: ENST00000544513.1

SEMA4D-224, Transcript of semaphorin 4D, humanhuman

TSL 5

Gene SEMA4D, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-224ENST00000544513 CCT4P50991 539 aaKnown RBP17.78■□□□□ 0.44
SEMA4D-224ENST00000544513 FLIIQ13045 1269 aa17.78■□□□□ 0.44
SEMA4D-224ENST00000544513 DACT2Q5SW24 774 aa17.78■□□□□ 0.44
SEMA4D-224ENST00000544513 ZNF646O15015 1829 aaPredicted RBP17.77■□□□□ 0.44
SEMA4D-224ENST00000544513 CSF1RP07333 972 aa17.77■□□□□ 0.44
SEMA4D-224ENST00000544513 ZNF157P51786 506 aaPredicted RBP17.77■□□□□ 0.44
SEMA4D-224ENST00000544513 SAGE1Q9NXZ1 904 aa17.77■□□□□ 0.44
SEMA4D-224ENST00000544513 LEMD3Q9Y2U8 911 aa17.77■□□□□ 0.44
SEMA4D-224ENST00000544513 FANCIQ9NVI1 1328 aa17.76■□□□□ 0.43
SEMA4D-224ENST00000544513 SLC10A3P09131 477 aa17.76■□□□□ 0.43
SEMA4D-224ENST00000544513 FKBP1BP68106 108 aa17.76■□□□□ 0.43
SEMA4D-224ENST00000544513 KIF23Q02241 960 aaPredicted RBP17.76■□□□□ 0.43
SEMA4D-224ENST00000544513 TXNRD3Q86VQ6 643 aa17.76■□□□□ 0.43
SEMA4D-224ENST00000544513 LINS1Q8NG48 757 aa17.76■□□□□ 0.43
SEMA4D-224ENST00000544513 DNAAF4Q8WXU2 420 aa17.76■□□□□ 0.43
SEMA4D-224ENST00000544513 COA1Q9GZY4 146 aa17.76■□□□□ 0.43
SEMA4D-224ENST00000544513 CACNA1FO60840 1977 aa17.76■□□□□ 0.43
SEMA4D-224ENST00000544513 SPEF2Q9C093 1822 aa17.76■□□□□ 0.43
SEMA4D-224ENST00000544513 VAMP4O75379 141 aa17.75■□□□□ 0.43
SEMA4D-224ENST00000544513 RGS19P49795 217 aa17.75■□□□□ 0.43
SEMA4D-224ENST00000544513 STRIP1Q5VSL9 837 aa17.75■□□□□ 0.43
SEMA4D-224ENST00000544513 WDR63Q8IWG1 891 aa17.75■□□□□ 0.43
SEMA4D-224ENST00000544513 MCOLN1Q9GZU1 580 aa17.75■□□□□ 0.43
SEMA4D-224ENST00000544513 ITGA6P23229 1130 aa17.74■□□□□ 0.43
SEMA4D-224ENST00000544513 IGHMBP2P38935 993 aaKnown RBP17.74■□□□□ 0.43
SEMA4D-224ENST00000544513 MMP14P50281 582 aa17.74■□□□□ 0.43
SEMA4D-224ENST00000544513 FAM161AQ3B820 660 aa17.74■□□□□ 0.43
SEMA4D-224ENST00000544513 NBPF9Q3BBW0 867 aa17.74■□□□□ 0.43
SEMA4D-224ENST00000544513 CSRNP1Q96S65 589 aa17.74■□□□□ 0.43
SEMA4D-224ENST00000544513 MXD3Q9BW11 206 aa17.74■□□□□ 0.43
SEMA4D-224ENST00000544513 ANKRD2Q9GZV1 360 aa17.74■□□□□ 0.43
SEMA4D-224ENST00000544513 MYH16Q9H6N6 1097 aa17.74■□□□□ 0.43
SEMA4D-224ENST00000544513 ZNF804BA4D1E1 1349 aa17.73■□□□□ 0.43
SEMA4D-224ENST00000544513 MYO3BQ8WXR4 1341 aa17.73■□□□□ 0.43
SEMA4D-224ENST00000544513 CCDC85CA6NKD9 419 aa17.73■□□□□ 0.43
SEMA4D-224ENST00000544513 KLRK1P26718 216 aa17.73■□□□□ 0.43
SEMA4D-224ENST00000544513 FKBP5Q13451 457 aaPredicted RBP17.73■□□□□ 0.43
SEMA4D-224ENST00000544513 MRS2Q9HD23 443 aa17.73■□□□□ 0.43
SEMA4D-224ENST00000544513 RNF186Q9NXI6 227 aa17.73■□□□□ 0.43
SEMA4D-224ENST00000544513 PAPPA2Q9BXP8 1791 aa17.73■□□□□ 0.43
SEMA4D-224ENST00000544513 RASAL3Q86YV0 1011 aa17.72■□□□□ 0.43
SEMA4D-224ENST00000544513 IRS2Q9Y4H2 1338 aa17.72■□□□□ 0.43
SEMA4D-224ENST00000544513 WNT10BO00744 389 aa17.71■□□□□ 0.43
SEMA4D-224ENST00000544513 REM2Q8IYK8 340 aaPredicted RBP17.71■□□□□ 0.43
SEMA4D-224ENST00000544513 OGFOD1Q8N543 542 aa17.71■□□□□ 0.43
SEMA4D-224ENST00000544513 ZBED3Q96IU2 234 aaPredicted RBP17.71■□□□□ 0.43
SEMA4D-224ENST00000544513 MPHOSPH8Q99549 860 aa17.71■□□□□ 0.43
SEMA4D-224ENST00000544513 TNRC18O15417 2968 aaPredicted RBP17.7■□□□□ 0.42
SEMA4D-224ENST00000544513 TRPA1O75762 1119 aa17.7■□□□□ 0.42
SEMA4D-224ENST00000544513 FOXO4P98177 505 aa17.7■□□□□ 0.42
SEMA4D-224ENST00000544513 EXOSC9Q06265 439 aaKnown RBP17.7■□□□□ 0.42
SEMA4D-224ENST00000544513 CHRNDQ07001 517 aa17.7■□□□□ 0.42
SEMA4D-224ENST00000544513 DGKZQ13574 1117 aa17.7■□□□□ 0.42
SEMA4D-224ENST00000544513 TTLL5Q6EMB2 1281 aa17.7■□□□□ 0.42
SEMA4D-224ENST00000544513 C15orf52Q6ZUT6 534 aaKnown RBP17.7■□□□□ 0.42
SEMA4D-224ENST00000544513 SCAF8Q9UPN6 1271 aaKnown RBP17.7■□□□□ 0.42
SEMA4D-224ENST00000544513 AKAP11Q9UKA4 1901 aa17.69■□□□□ 0.42
SEMA4D-224ENST00000544513 BEND3Q5T5X7 828 aa17.69■□□□□ 0.42
SEMA4D-224ENST00000544513 PRAMEF18Q5VWM3 479 aa17.69■□□□□ 0.42
SEMA4D-224ENST00000544513 SPINK5Q9NQ38 1064 aaPredicted RBP17.69■□□□□ 0.42
SEMA4D-224ENST00000544513 ANKRD18BA2A2Z9 1011 aa17.68■□□□□ 0.42
SEMA4D-224ENST00000544513 UBE2Q2LH0YL09 131 aa17.68■□□□□ 0.42
SEMA4D-224ENST00000544513 MOB2Q70IA6 237 aa17.68■□□□□ 0.42
SEMA4D-224ENST00000544513 FBXW7Q969H0 707 aa17.68■□□□□ 0.42
SEMA4D-224ENST00000544513 CD209Q9NNX6 404 aa17.68■□□□□ 0.42
SEMA4D-224ENST00000544513 F6X3S4 739 aa17.67■□□□□ 0.42
SEMA4D-224ENST00000544513 SALL2Q9Y467 1007 aaPredicted RBP17.67■□□□□ 0.42
SEMA4D-224ENST00000544513 SNAP23O00161 211 aa17.66■□□□□ 0.42
SEMA4D-224ENST00000544513 SASH1O94885 1247 aa17.66■□□□□ 0.42
SEMA4D-224ENST00000544513 GTF2IP78347 998 aa17.66■□□□□ 0.42
SEMA4D-224ENST00000544513 MLLT1Q03111 559 aaPredicted RBP17.66■□□□□ 0.42
SEMA4D-224ENST00000544513 IFIT5Q13325 482 aaKnown RBP17.66■□□□□ 0.42
SEMA4D-224ENST00000544513 KIAA0825Q8IV33 1275 aa17.66■□□□□ 0.42
SEMA4D-224ENST00000544513 ANP32CO43423 234 aa17.65■□□□□ 0.42
SEMA4D-224ENST00000544513 TAF5LO75529 589 aa17.65■□□□□ 0.42
SEMA4D-224ENST00000544513 KCNJ4P48050 445 aa17.65■□□□□ 0.42
SEMA4D-224ENST00000544513 EPHA10Q5JZY3 1008 aa17.65■□□□□ 0.42
SEMA4D-224ENST00000544513 CERS5Q8N5B7 392 aa17.65■□□□□ 0.42
SEMA4D-224ENST00000544513 MTMR14Q8NCE2 650 aa17.65■□□□□ 0.42
SEMA4D-224ENST00000544513 HDAC9Q9UKV0 1011 aa17.65■□□□□ 0.42
SEMA4D-224ENST00000544513 A0A1B0GUL6 1792 aa17.64■□□□□ 0.41
SEMA4D-224ENST00000544513 IL1R1P14778 569 aa17.64■□□□□ 0.41
SEMA4D-224ENST00000544513 APOBEC3FQ8IUX4 373 aaKnown RBP17.64■□□□□ 0.41
SEMA4D-224ENST00000544513 HELBQ8NG08 1087 aaPredicted RBP17.64■□□□□ 0.41
SEMA4D-224ENST00000544513 GRM8O00222 908 aa17.63■□□□□ 0.41
SEMA4D-224ENST00000544513 TM4SF4P48230 202 aa17.63■□□□□ 0.41
SEMA4D-224ENST00000544513 LDLRAD1Q5T700 205 aa17.63■□□□□ 0.41
SEMA4D-224ENST00000544513 LMBR1LQ6UX01 489 aa17.63■□□□□ 0.41
SEMA4D-224ENST00000544513 PDE4DIPQ5VU43 2346 aa17.63■□□□□ 0.41
SEMA4D-224ENST00000544513 NF2P35240 595 aa17.62■□□□□ 0.41
SEMA4D-224ENST00000544513 FKBP1AP62942 108 aaKnown RBP17.62■□□□□ 0.41
SEMA4D-224ENST00000544513 PTPN12Q05209 780 aaKnown RBP17.62■□□□□ 0.41
SEMA4D-224ENST00000544513 COL1A1P02452 1464 aaPredicted RBP17.62■□□□□ 0.41
SEMA4D-224ENST00000544513 ZNF316A6NFI3 1004 aaPredicted RBP17.61■□□□□ 0.41
SEMA4D-224ENST00000544513 ALDH1L1O75891 902 aa17.61■□□□□ 0.41
SEMA4D-224ENST00000544513 TTLL12Q14166 644 aaPredicted RBP17.61■□□□□ 0.41
SEMA4D-224ENST00000544513 ZNF804AQ7Z570 1209 aa17.61■□□□□ 0.41
SEMA4D-224ENST00000544513 CTU1Q7Z7A3 348 aaKnown RBP17.61■□□□□ 0.41
SEMA4D-224ENST00000544513 ZNF594Q96JF6 807 aaPredicted RBP17.61■□□□□ 0.41
SEMA4D-224ENST00000544513 DEFB129Q9H1M3 183 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms