RNA–Protein interactions for RNA: ENST00000544432.5

VAMP1-208, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3

Gene VAMP1, Length 759 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-208ENST00000544432 ANKRD44Q8N8A2 993 aa17.51■□□□□ 0.39
VAMP1-208ENST00000544432 ZNF594Q96JF6 807 aaPredicted RBP17.51■□□□□ 0.39
VAMP1-208ENST00000544432 BICC1Q9H694 974 aaKnown RBP17.51■□□□□ 0.39
VAMP1-208ENST00000544432 SPEF2Q9C093 1822 aa17.51■□□□□ 0.39
VAMP1-208ENST00000544432 HNRNPUQ00839 825 aaKnown RBP eCLIP17.5■□□□□ 0.39
VAMP1-208ENST00000544432 CDC37L1Q7L3B6 337 aa17.5■□□□□ 0.39
VAMP1-208ENST00000544432 CNNM1Q9NRU3 951 aa17.5■□□□□ 0.39
VAMP1-208ENST00000544432 CNTNAP1P78357 1384 aa17.5■□□□□ 0.39
VAMP1-208ENST00000544432 KIF16BQ96L93 1317 aa17.49■□□□□ 0.39
VAMP1-208ENST00000544432 PCNTO95613 3336 aa17.49■□□□□ 0.39
VAMP1-208ENST00000544432 TAF5LO75529 589 aa17.49■□□□□ 0.39
VAMP1-208ENST00000544432 TBC1D10BQ4KMP7 808 aaPredicted RBP17.49■□□□□ 0.39
VAMP1-208ENST00000544432 DACT2Q5SW24 774 aa17.49■□□□□ 0.39
VAMP1-208ENST00000544432 HELBQ8NG08 1087 aaPredicted RBP17.49■□□□□ 0.39
VAMP1-208ENST00000544432 RIPOR2Q9Y4F9 1068 aa17.49■□□□□ 0.39
VAMP1-208ENST00000544432 MYO3BQ8WXR4 1341 aa17.48■□□□□ 0.39
VAMP1-208ENST00000544432 RASSF10A6NK89 507 aa17.48■□□□□ 0.39
VAMP1-208ENST00000544432 USP17L8P0C7I0 530 aa17.48■□□□□ 0.39
VAMP1-208ENST00000544432 KLRK1P26718 216 aa17.48■□□□□ 0.39
VAMP1-208ENST00000544432 UBE4AQ14139 1066 aa17.48■□□□□ 0.39
VAMP1-208ENST00000544432 CST9Q5W186 159 aa17.48■□□□□ 0.39
VAMP1-208ENST00000544432 CD209Q9NNX6 404 aa17.48■□□□□ 0.39
VAMP1-208ENST00000544432 HDAC5Q9UQL6 1122 aa17.48■□□□□ 0.39
VAMP1-208ENST00000544432 PSME4Q14997 1843 aa17.48■□□□□ 0.39
VAMP1-208ENST00000544432 MROH5Q6ZUA9 1318 aa17.47■□□□□ 0.39
VAMP1-208ENST00000544432 SNAP23O00161 211 aa17.47■□□□□ 0.39
VAMP1-208ENST00000544432 TRAF5O00463 557 aa17.47■□□□□ 0.39
VAMP1-208ENST00000544432 IPO8O15397 1037 aaKnown RBP17.47■□□□□ 0.39
VAMP1-208ENST00000544432 EGFRP00533 1210 aa17.47■□□□□ 0.39
VAMP1-208ENST00000544432 KIF4BQ2VIQ3 1234 aa17.47■□□□□ 0.39
VAMP1-208ENST00000544432 TTLL5Q6EMB2 1281 aa17.47■□□□□ 0.39
VAMP1-208ENST00000544432 GLIS2Q9BZE0 524 aaPredicted RBP17.47■□□□□ 0.39
VAMP1-208ENST00000544432 MKRN1Q9UHC7 482 aaKnown RBP17.47■□□□□ 0.39
VAMP1-208ENST00000544432 IL1R1P14778 569 aa17.46■□□□□ 0.39
VAMP1-208ENST00000544432 FMR1Q06787 632 aaKnown RBP eCLIP17.46■□□□□ 0.39
VAMP1-208ENST00000544432 RBM26Q5T8P6 1007 aaKnown RBP17.46■□□□□ 0.39
VAMP1-208ENST00000544432 INTS3Q68E01 1043 aaKnown RBP17.46■□□□□ 0.39
VAMP1-208ENST00000544432 ZNF804AQ7Z570 1209 aa17.46■□□□□ 0.39
VAMP1-208ENST00000544432 PUS3Q9BZE2 481 aaKnown RBP17.46■□□□□ 0.39
VAMP1-208ENST00000544432 UBTFL1P0CB47 393 aaPredicted RBP17.45■□□□□ 0.38
VAMP1-208ENST00000544432 DEFB115Q30KQ5 88 aa17.45■□□□□ 0.38
VAMP1-208ENST00000544432 DCPSQ96C86 337 aaKnown RBP17.45■□□□□ 0.38
VAMP1-208ENST00000544432 MYOZ2Q9NPC6 264 aa17.45■□□□□ 0.38
VAMP1-208ENST00000544432 ZBED9Q6R2W3 1325 aa17.45■□□□□ 0.38
VAMP1-208ENST00000544432 PLIN1O60240 522 aa17.44■□□□□ 0.38
VAMP1-208ENST00000544432 FKBP1AP62942 108 aaKnown RBP17.44■□□□□ 0.38
VAMP1-208ENST00000544432 KRT26Q7Z3Y9 468 aa17.44■□□□□ 0.38
VAMP1-208ENST00000544432 USP48Q86UV5 1035 aa17.44■□□□□ 0.38
VAMP1-208ENST00000544432 OGFOD1Q8N543 542 aa17.44■□□□□ 0.38
VAMP1-208ENST00000544432 ABT1Q9ULW3 272 aaKnown RBP17.44■□□□□ 0.38
VAMP1-208ENST00000544432 TLL2Q9Y6L7 1015 aa17.44■□□□□ 0.38
VAMP1-208ENST00000544432 CELF2O95319 508 aaKnown RBP17.43■□□□□ 0.38
VAMP1-208ENST00000544432 RFX5P48382 616 aaPredicted RBP17.43■□□□□ 0.38
VAMP1-208ENST00000544432 VEGFBP49765 207 aa17.43■□□□□ 0.38
VAMP1-208ENST00000544432 GTF2IP78347 998 aa17.43■□□□□ 0.38
VAMP1-208ENST00000544432 SCARF1Q14162 830 aa17.43■□□□□ 0.38
VAMP1-208ENST00000544432 ATF7IPQ6VMQ6 1270 aa17.43■□□□□ 0.38
VAMP1-208ENST00000544432 TRPM7Q96QT4 1865 aa17.43■□□□□ 0.38
VAMP1-208ENST00000544432 PITPNM2Q9BZ72 1349 aa17.43■□□□□ 0.38
VAMP1-208ENST00000544432 BCAR3O75815 825 aa17.42■□□□□ 0.38
VAMP1-208ENST00000544432 SASH1O94885 1247 aa17.42■□□□□ 0.38
VAMP1-208ENST00000544432 LRRC24Q50LG9 513 aa17.42■□□□□ 0.38
VAMP1-208ENST00000544432 VGLL2Q8N8G2 317 aa17.42■□□□□ 0.38
VAMP1-208ENST00000544432 FBXW7Q969H0 707 aa17.42■□□□□ 0.38
VAMP1-208ENST00000544432 HHIPL1Q96JK4 782 aa17.42■□□□□ 0.38
VAMP1-208ENST00000544432 MXD3Q9BW11 206 aa17.42■□□□□ 0.38
VAMP1-208ENST00000544432 FBXO3Q9UK99 471 aa17.42■□□□□ 0.38
VAMP1-208ENST00000544432 A0A1B0GUL6 1792 aa17.42■□□□□ 0.38
VAMP1-208ENST00000544432 PDE8BO95263 885 aa17.41■□□□□ 0.38
VAMP1-208ENST00000544432 GNAI3P08754 354 aa17.41■□□□□ 0.38
VAMP1-208ENST00000544432 TRIM27P14373 513 aa17.41■□□□□ 0.38
VAMP1-208ENST00000544432 HIBADHP31937 336 aaKnown RBP17.41■□□□□ 0.38
VAMP1-208ENST00000544432 PTPN12Q05209 780 aaKnown RBP17.41■□□□□ 0.38
VAMP1-208ENST00000544432 METTL24Q5JXM2 366 aa17.41■□□□□ 0.38
VAMP1-208ENST00000544432 SAPCD2Q86UD0 394 aa17.41■□□□□ 0.38
VAMP1-208ENST00000544432 SULF1Q8IWU6 871 aa17.41■□□□□ 0.38
VAMP1-208ENST00000544432 TDRD7Q8NHU6 1098 aaKnown RBP17.41■□□□□ 0.38
VAMP1-208ENST00000544432 FAM84BQ96KN1 310 aaPredicted RBP17.41■□□□□ 0.38
VAMP1-208ENST00000544432 GGA3Q9NZ52 723 aa17.41■□□□□ 0.38
VAMP1-208ENST00000544432 HDAC9Q9UKV0 1011 aa17.41■□□□□ 0.38
VAMP1-208ENST00000544432 ZNF646O15015 1829 aaPredicted RBP17.4■□□□□ 0.38
VAMP1-208ENST00000544432 EYA2O00167 538 aa17.4■□□□□ 0.38
VAMP1-208ENST00000544432 ANGEL2Q5VTE6 544 aaKnown RBP17.4■□□□□ 0.38
VAMP1-208ENST00000544432 FBXO33Q7Z6M2 555 aa17.4■□□□□ 0.38
VAMP1-208ENST00000544432 MEIS3Q99687 375 aa17.4■□□□□ 0.38
VAMP1-208ENST00000544432 FAM205AQ6ZU69 1335 aa17.4■□□□□ 0.38
VAMP1-208ENST00000544432 CIAO1O76071 339 aa17.39■□□□□ 0.37
VAMP1-208ENST00000544432 ECE1P42892 770 aa17.39■□□□□ 0.37
VAMP1-208ENST00000544432 CERS5Q8N5B7 392 aa17.39■□□□□ 0.37
VAMP1-208ENST00000544432 KLHDC4Q8TBB5 520 aa17.39■□□□□ 0.37
VAMP1-208ENST00000544432 ZBED3Q96IU2 234 aaPredicted RBP17.39■□□□□ 0.37
VAMP1-208ENST00000544432 LRRFIP2Q9Y608 721 aaKnown RBP17.39■□□□□ 0.37
VAMP1-208ENST00000544432 ASTN2O75129 1339 aaPredicted RBP17.39■□□□□ 0.37
VAMP1-208ENST00000544432 WDR33Q9C0J8 1336 aaKnown RBP17.39■□□□□ 0.37
VAMP1-208ENST00000544432 ADM5C9JUS6 153 aa17.38■□□□□ 0.37
VAMP1-208ENST00000544432 WNT10BO00744 389 aa17.38■□□□□ 0.37
VAMP1-208ENST00000544432 HSPA1AP0DMV8 641 aaKnown RBP17.38■□□□□ 0.37
VAMP1-208ENST00000544432 HSPA1BP0DMV9 641 aaKnown RBP17.38■□□□□ 0.37
VAMP1-208ENST00000544432 FGFR2P21802 821 aa17.38■□□□□ 0.37
VAMP1-208ENST00000544432 GYG1P46976 350 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms