RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 RNF113AO15541 343 aaKnown RBP23.86■■□□□ 1.41
COPS7A-218ENST00000543939 TM4SF1P30408 202 aa23.86■■□□□ 1.41
COPS7A-218ENST00000543939 PI16Q6UXB8 463 aa23.86■■□□□ 1.41
COPS7A-218ENST00000543939 AKT1S1Q96B36 256 aa23.86■■□□□ 1.41
COPS7A-218ENST00000543939 SEC62Q99442 399 aaKnown RBP23.86■■□□□ 1.41
COPS7A-218ENST00000543939 CNBD1Q8NA66 436 aa23.85■■□□□ 1.41
COPS7A-218ENST00000543939 NPHP1O15259 732 aa23.84■■□□□ 1.41
COPS7A-218ENST00000543939 RPS8P62241 208 aaKnown RBP23.84■■□□□ 1.41
COPS7A-218ENST00000543939 ZNF827Q17R98 1081 aa23.84■■□□□ 1.41
COPS7A-218ENST00000543939 LRRFIP1Q32MZ4 808 aaKnown RBP23.84■■□□□ 1.41
COPS7A-218ENST00000543939 PRPF40BQ6NWY9 871 aaKnown RBP23.84■■□□□ 1.41
COPS7A-218ENST00000543939 MINPP1Q9UNW1 487 aa23.84■■□□□ 1.41
COPS7A-218ENST00000543939 MYO5AQ9Y4I1 1855 aaKnown RBP23.84■■□□□ 1.41
COPS7A-218ENST00000543939 PRR5LQ6MZQ0 368 aa23.84■■□□□ 1.41
COPS7A-218ENST00000543939 DDIT3P35638 169 aa23.83■■□□□ 1.41
COPS7A-218ENST00000543939 SLFNL1Q499Z3 407 aa23.83■■□□□ 1.41
COPS7A-218ENST00000543939 CREB3L3Q68CJ9 461 aa23.83■■□□□ 1.41
COPS7A-218ENST00000543939 CCDC129Q6ZRS4 1044 aa23.83■■□□□ 1.41
COPS7A-218ENST00000543939 ZFYP08048 801 aaPredicted RBP23.82■■□□□ 1.4
COPS7A-218ENST00000543939 KCNJ4P48050 445 aa23.82■■□□□ 1.4
COPS7A-218ENST00000543939 MCM2P49736 904 aa23.82■■□□□ 1.4
COPS7A-218ENST00000543939 SERPINB2P05120 415 aa23.81■■□□□ 1.4
COPS7A-218ENST00000543939 CYP2E1P05181 493 aaPredicted RBP23.81■■□□□ 1.4
COPS7A-218ENST00000543939 UBE4AQ14139 1066 aa23.81■■□□□ 1.4
COPS7A-218ENST00000543939 TTF1Q15361 905 aaPredicted RBP23.81■■□□□ 1.4
COPS7A-218ENST00000543939 UPF3BQ9BZI7 483 aaKnown RBP23.81■■□□□ 1.4
COPS7A-218ENST00000543939 TFCP2L1Q9NZI6 479 aa23.81■■□□□ 1.4
COPS7A-218ENST00000543939 SLC27A2O14975 620 aa23.81■■□□□ 1.4
COPS7A-218ENST00000543939 HMG20BQ9P0W2 317 aa23.81■■□□□ 1.4
COPS7A-218ENST00000543939 DOCK2Q92608 1830 aa23.81■■□□□ 1.4
COPS7A-218ENST00000543939 TM6SF1Q9BZW5 370 aa23.8■■□□□ 1.4
COPS7A-218ENST00000543939 MAST3O60307 1309 aa23.8■■□□□ 1.4
COPS7A-218ENST00000543939 ZKSCAN1P17029 563 aaPredicted RBP23.79■■□□□ 1.4
COPS7A-218ENST00000543939 DDR1Q08345 913 aa23.79■■□□□ 1.4
COPS7A-218ENST00000543939 CHMP5Q9NZZ3 219 aa23.79■■□□□ 1.4
COPS7A-218ENST00000543939 HSP90AA1P07900 732 aaKnown RBP23.79■■□□□ 1.4
COPS7A-218ENST00000543939 BCAMP50895 628 aa23.79■■□□□ 1.4
COPS7A-218ENST00000543939 RASGRF1Q13972 1273 aa23.79■■□□□ 1.4
COPS7A-218ENST00000543939 RNF20Q5VTR2 975 aa23.79■■□□□ 1.4
COPS7A-218ENST00000543939 SPATA5Q8NB90 893 aa23.79■■□□□ 1.4
COPS7A-218ENST00000543939 OSBP2Q969R2 916 aa23.79■■□□□ 1.4
COPS7A-218ENST00000543939 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.79■■□□□ 1.4
COPS7A-218ENST00000543939 PIH1D3Q9NQM4 214 aaKnown RBP23.79■■□□□ 1.4
COPS7A-218ENST00000543939 U3KPZ7 1027 aaPredicted RBP23.79■■□□□ 1.4
COPS7A-218ENST00000543939 POLRMTO00411 1230 aaKnown RBP23.78■■□□□ 1.4
COPS7A-218ENST00000543939 ADCK5Q3MIX3 580 aa23.78■■□□□ 1.4
COPS7A-218ENST00000543939 COL23A1Q86Y22 540 aaPredicted RBP23.78■■□□□ 1.4
COPS7A-218ENST00000543939 TTC14Q96N46 770 aa23.78■■□□□ 1.4
COPS7A-218ENST00000543939 M0R2C6 588 aa23.77■■□□□ 1.4
COPS7A-218ENST00000543939 ST5P78524 1137 aa23.77■■□□□ 1.4
COPS7A-218ENST00000543939 TSGA10IPQ3SY00 556 aa23.77■■□□□ 1.4
COPS7A-218ENST00000543939 APPBP2Q92624 585 aa23.77■■□□□ 1.4
COPS7A-218ENST00000543939 DSCC1Q9BVC3 393 aa23.77■■□□□ 1.4
COPS7A-218ENST00000543939 ZNF804BA4D1E1 1349 aa23.77■■□□□ 1.4
COPS7A-218ENST00000543939 CRY2Q49AN0 593 aa23.76■■□□□ 1.39
COPS7A-218ENST00000543939 ZSCAN25Q6NSZ9 544 aa23.76■■□□□ 1.39
COPS7A-218ENST00000543939 FLAD1Q8NFF5 587 aa23.76■■□□□ 1.39
COPS7A-218ENST00000543939 JAKMIP1Q96N16 626 aaKnown RBP23.76■■□□□ 1.39
COPS7A-218ENST00000543939 ANKRD2Q9GZV1 360 aa23.76■■□□□ 1.39
COPS7A-218ENST00000543939 ZSWIM6Q9HCJ5 1215 aa23.76■■□□□ 1.39
COPS7A-218ENST00000543939 RPAP1Q9BWH6 1393 aaPredicted RBP23.76■■□□□ 1.39
COPS7A-218ENST00000543939 CASTP20810 708 aaKnown RBP23.76■■□□□ 1.39
COPS7A-218ENST00000543939 ADD2P35612 726 aa23.76■■□□□ 1.39
COPS7A-218ENST00000543939 GRAPQ13588 217 aa23.76■■□□□ 1.39
COPS7A-218ENST00000543939 GRAPLQ8TC17 118 aaPredicted RBP23.76■■□□□ 1.39
COPS7A-218ENST00000543939 CIZ1Q9ULV3 898 aaPredicted RBP23.76■■□□□ 1.39
COPS7A-218ENST00000543939 WTIPA6NIX2 430 aaPredicted RBP23.75■■□□□ 1.39
COPS7A-218ENST00000543939 NBR1Q14596 966 aa23.75■■□□□ 1.39
COPS7A-218ENST00000543939 WASHC4Q2M389 1173 aa23.75■■□□□ 1.39
COPS7A-218ENST00000543939 TMX3Q96JJ7 454 aa23.75■■□□□ 1.39
COPS7A-218ENST00000543939 FOXD4L1Q9NU39 408 aa23.75■■□□□ 1.39
COPS7A-218ENST00000543939 NRXN2Q9P2S2 1712 aa23.75■■□□□ 1.39
COPS7A-218ENST00000543939 VPS53Q5VIR6 699 aa23.74■■□□□ 1.39
COPS7A-218ENST00000543939 NLGN1Q8N2Q7 840 aa23.74■■□□□ 1.39
COPS7A-218ENST00000543939 HSPD1P10809 573 aaKnown RBP23.73■■□□□ 1.39
COPS7A-218ENST00000543939 UBE3CQ15386 1083 aa23.73■■□□□ 1.39
COPS7A-218ENST00000543939 NFKBIBQ15653 356 aa23.73■■□□□ 1.39
COPS7A-218ENST00000543939 IDH1O75874 414 aaKnown RBP23.73■■□□□ 1.39
COPS7A-218ENST00000543939 PSMA5P28066 241 aa23.73■■□□□ 1.39
COPS7A-218ENST00000543939 GYG1P46976 350 aa23.73■■□□□ 1.39
COPS7A-218ENST00000543939 SLC9C2Q5TAH2 1124 aa23.73■■□□□ 1.39
COPS7A-218ENST00000543939 PUS7LQ9H0K6 701 aaKnown RBP23.73■■□□□ 1.39
COPS7A-218ENST00000543939 CYP46A1Q9Y6A2 500 aa23.73■■□□□ 1.39
COPS7A-218ENST00000543939 TAF6LQ9Y6J9 622 aa23.73■■□□□ 1.39
COPS7A-218ENST00000543939 RUFY3Q7L099 469 aa23.72■■□□□ 1.39
COPS7A-218ENST00000543939 RPGRQ92834 1020 aaKnown RBP23.72■■□□□ 1.39
COPS7A-218ENST00000543939 GNL3LQ9NVN8 582 aaKnown RBP23.72■■□□□ 1.39
COPS7A-218ENST00000543939 ANKRD31Q8N7Z5 1873 aa23.72■■□□□ 1.39
COPS7A-218ENST00000543939 PNPLA7Q6ZV29 1317 aa23.71■■□□□ 1.39
COPS7A-218ENST00000543939 CPA1P15085 419 aa23.71■■□□□ 1.39
COPS7A-218ENST00000543939 PDE6AP16499 860 aa23.71■■□□□ 1.39
COPS7A-218ENST00000543939 CUL4AQ13619 759 aa23.71■■□□□ 1.39
COPS7A-218ENST00000543939 CAVIN4Q5BKX8 364 aa23.71■■□□□ 1.39
COPS7A-218ENST00000543939 FAM84BQ96KN1 310 aaPredicted RBP23.71■■□□□ 1.39
COPS7A-218ENST00000543939 TCRBV5S4A2TA0A5A2 114 aa23.7■■□□□ 1.39
COPS7A-218ENST00000543939 KLRG2A4D1S0 409 aaPredicted RBP23.7■■□□□ 1.39
COPS7A-218ENST00000543939 CYP21A2P08686 494 aa23.7■■□□□ 1.39
COPS7A-218ENST00000543939 AK2P54819 239 aa23.7■■□□□ 1.39
COPS7A-218ENST00000543939 KRT32Q14532 448 aa23.7■■□□□ 1.39
COPS7A-218ENST00000543939 FBXO33Q7Z6M2 555 aa23.7■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms