RNA–Protein interactions for RNA: ENST00000543543.5

HMBS-217, Transcript of hydroxymethylbilane synthase, humanhuman

TSL 5

Gene HMBS, Length 1,796 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBS-217ENST00000543543 ZSCAN25Q6NSZ9 544 aa13.22□□□□□ -0.29
HMBS-217ENST00000543543 DDX46Q7L014 1031 aaKnown RBP13.22□□□□□ -0.29
HMBS-217ENST00000543543 COL23A1Q86Y22 540 aaPredicted RBP13.22□□□□□ -0.29
HMBS-217ENST00000543543 ANKRD2Q9GZV1 360 aa13.22□□□□□ -0.29
HMBS-217ENST00000543543 MED23Q9ULK4 1368 aa13.22□□□□□ -0.29
HMBS-217ENST00000543543 RPS8P62241 208 aaKnown RBP13.22□□□□□ -0.29
HMBS-217ENST00000543543 CHD4Q14839 1912 aa13.22□□□□□ -0.29
HMBS-217ENST00000543543 CCDC171Q6TFL3 1326 aa13.22□□□□□ -0.29
HMBS-217ENST00000543543 GOLIM4O00461 696 aa13.21□□□□□ -0.29
HMBS-217ENST00000543543 ADORA1P30542 326 aa13.21□□□□□ -0.29
HMBS-217ENST00000543543 CHRNDQ07001 517 aa13.21□□□□□ -0.29
HMBS-217ENST00000543543 MCMDC2Q4G0Z9 681 aa13.21□□□□□ -0.29
HMBS-217ENST00000543543 KCNB2Q92953 911 aa13.21□□□□□ -0.29
HMBS-217ENST00000543543 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.21□□□□□ -0.292e-7■■■□□ 19.2
HMBS-217ENST00000543543 AKAP11Q9UKA4 1901 aa13.21□□□□□ -0.3
HMBS-217ENST00000543543 RNF20Q5VTR2 975 aa13.2□□□□□ -0.3
HMBS-217ENST00000543543 CCDC102BQ68D86 513 aa13.2□□□□□ -0.3
HMBS-217ENST00000543543 SMIM5Q71RC9 77 aa13.2□□□□□ -0.3
HMBS-217ENST00000543543 MAP4K1Q92918 833 aa13.2□□□□□ -0.3
HMBS-217ENST00000543543 A0A1B0GUL6 1792 aa13.2□□□□□ -0.3
HMBS-217ENST00000543543 K7ELQ4 463 aaPredicted RBP13.2□□□□□ -0.3
HMBS-217ENST00000543543 RNF113AO15541 343 aaKnown RBP13.2□□□□□ -0.3
HMBS-217ENST00000543543 IGSF3O75054 1194 aa13.2□□□□□ -0.3
HMBS-217ENST00000543543 SERPINB2P05120 415 aa13.2□□□□□ -0.3
HMBS-217ENST00000543543 PRR5LQ6MZQ0 368 aa13.2□□□□□ -0.3
HMBS-217ENST00000543543 GNL3LQ9NVN8 582 aaKnown RBP13.2□□□□□ -0.3
HMBS-217ENST00000543543 HMG20BQ9P0W2 317 aa13.2□□□□□ -0.3
HMBS-217ENST00000543543 MYH7P12883 1935 aa13.19□□□□□ -0.3
HMBS-217ENST00000543543 A0A0D9SFI3 127 aa13.19□□□□□ -0.3
HMBS-217ENST00000543543 ZKSCAN1P17029 563 aaPredicted RBP13.19□□□□□ -0.3
HMBS-217ENST00000543543 CRY2Q49AN0 593 aa13.19□□□□□ -0.3
HMBS-217ENST00000543543 ZMYM1Q5SVZ6 1142 aa13.19□□□□□ -0.3
HMBS-217ENST00000543543 C3orf67Q6ZVT6 689 aa13.19□□□□□ -0.3
HMBS-217ENST00000543543 TMC4Q7Z404 712 aa13.19□□□□□ -0.3
HMBS-217ENST00000543543 FAM227BQ96M60 508 aa13.19□□□□□ -0.3
HMBS-217ENST00000543543 TM6SF1Q9BZW5 370 aa13.19□□□□□ -0.3
HMBS-217ENST00000543543 IL25Q9H293 177 aa13.19□□□□□ -0.3
HMBS-217ENST00000543543 MINPP1Q9UNW1 487 aa13.19□□□□□ -0.3
HMBS-217ENST00000543543 KLRG2A4D1S0 409 aaPredicted RBP13.18□□□□□ -0.3
HMBS-217ENST00000543543 FKBP4Q02790 459 aaKnown RBP eCLIP13.18□□□□□ -0.3
HMBS-217ENST00000543543 GRAPQ13588 217 aa13.18□□□□□ -0.3
HMBS-217ENST00000543543 TMED8Q6PL24 325 aaPredicted RBP13.18□□□□□ -0.3
HMBS-217ENST00000543543 GRAPLQ8TC17 118 aaPredicted RBP13.18□□□□□ -0.3
HMBS-217ENST00000543543 EDC3Q96F86 508 aaKnown RBP13.18□□□□□ -0.3
HMBS-217ENST00000543543 POLRMTO00411 1230 aaKnown RBP13.17□□□□□ -0.3
HMBS-217ENST00000543543 SEMA3EO15041 775 aa13.17□□□□□ -0.3
HMBS-217ENST00000543543 TAF5LO75529 589 aa13.17□□□□□ -0.3
HMBS-217ENST00000543543 MCAMP43121 646 aa13.17□□□□□ -0.3
HMBS-217ENST00000543543 NECTIN1Q15223 517 aa13.17□□□□□ -0.3
HMBS-217ENST00000543543 TSGA10IPQ3SY00 556 aa13.17□□□□□ -0.3
HMBS-217ENST00000543543 DSCC1Q9BVC3 393 aa13.17□□□□□ -0.3
HMBS-217ENST00000543543 U3KPZ7 1027 aaPredicted RBP13.17□□□□□ -0.3
HMBS-217ENST00000543543 NRXN2Q9P2S2 1712 aa13.17□□□□□ -0.3
HMBS-217ENST00000543543 ZNF804BA4D1E1 1349 aa13.17□□□□□ -0.3
HMBS-217ENST00000543543 PDS5AQ29RF7 1337 aaKnown RBP13.17□□□□□ -0.3
HMBS-217ENST00000543543 POLD1P28340 1107 aa13.17□□□□□ -0.3
HMBS-217ENST00000543543 HOXA10P31260 410 aaPredicted RBP13.17□□□□□ -0.3
HMBS-217ENST00000543543 ZAP70P43403 619 aa13.17□□□□□ -0.3
HMBS-217ENST00000543543 PHKA1P46020 1223 aa13.17□□□□□ -0.3
HMBS-217ENST00000543543 KCNJ4P48050 445 aa13.17□□□□□ -0.3
HMBS-217ENST00000543543 SLC4A3P48751 1232 aa13.17□□□□□ -0.3
HMBS-217ENST00000543543 KRT32Q14532 448 aa13.17□□□□□ -0.3
HMBS-217ENST00000543543 CAVIN4Q5BKX8 364 aa13.17□□□□□ -0.3
HMBS-217ENST00000543543 MSL1Q68DK7 614 aa13.17□□□□□ -0.3
HMBS-217ENST00000543543 HELBQ8NG08 1087 aaPredicted RBP13.17□□□□□ -0.3
HMBS-217ENST00000543543 RPGRQ92834 1020 aaKnown RBP13.17□□□□□ -0.3
HMBS-217ENST00000543543 CELF1Q92879 486 aaKnown RBP13.17□□□□□ -0.3
HMBS-217ENST00000543543 RBM17Q96I25 401 aaKnown RBP13.17□□□□□ -0.3
HMBS-217ENST00000543543 TNRC6CQ9HCJ0 1690 aaKnown RBP13.16□□□□□ -0.3
HMBS-217ENST00000543543 BBOX1O75936 387 aa13.16□□□□□ -0.3
HMBS-217ENST00000543543 PSMA5P28066 241 aa13.16□□□□□ -0.3
HMBS-217ENST00000543543 PTH1RQ03431 593 aa13.16□□□□□ -0.3
HMBS-217ENST00000543543 UBE3CQ15386 1083 aa13.16□□□□□ -0.3
HMBS-217ENST00000543543 SPATA5Q8NB90 893 aa13.16□□□□□ -0.3
HMBS-217ENST00000543543 APPBP2Q92624 585 aa13.16□□□□□ -0.3
HMBS-217ENST00000543543 CRAMP1Q96RY5 1269 aa13.16□□□□□ -0.3
HMBS-217ENST00000543543 RBM8AQ9Y5S9 174 aaKnown RBP13.16□□□□□ -0.3
HMBS-217ENST00000543543 SNX14Q9Y5W7 946 aa13.16□□□□□ -0.3
HMBS-217ENST00000543543 DCAF8L1A6NGE4 600 aa13.15□□□□□ -0.3
HMBS-217ENST00000543543 YY1P25490 414 aa13.15□□□□□ -0.3
HMBS-217ENST00000543543 NEK4P51957 841 aa13.15□□□□□ -0.3
HMBS-217ENST00000543543 BRIP1Q9BX63 1249 aa13.15□□□□□ -0.3
HMBS-217ENST00000543543 CIZ1Q9ULV3 898 aaPredicted RBP13.15□□□□□ -0.3
HMBS-217ENST00000543543 LEMD3Q9Y2U8 911 aa13.15□□□□□ -0.3
HMBS-217ENST00000543543 DOCK2Q92608 1830 aa13.15□□□□□ -0.3
HMBS-217ENST00000543543 DDR1Q08345 913 aa13.15□□□□□ -0.31
HMBS-217ENST00000543543 MAP3K12Q12852 859 aa13.15□□□□□ -0.31
HMBS-217ENST00000543543 SCARF1Q14162 830 aa13.15□□□□□ -0.31
HMBS-217ENST00000543543 PALD1Q9ULE6 856 aa13.15□□□□□ -0.31
HMBS-217ENST00000543543 NDUFB9Q9Y6M9 179 aa13.15□□□□□ -0.31
HMBS-217ENST00000543543 TAF1P21675 1872 aa13.14□□□□□ -0.31
HMBS-217ENST00000543543 CYP2E1P05181 493 aaPredicted RBP13.14□□□□□ -0.31
HMBS-217ENST00000543543 CREB3L3Q68CJ9 461 aa13.14□□□□□ -0.31
HMBS-217ENST00000543543 C15orf52Q6ZUT6 534 aaKnown RBP13.14□□□□□ -0.31
HMBS-217ENST00000543543 ZNF589Q86UQ0 364 aaPredicted RBP13.14□□□□□ -0.31
HMBS-217ENST00000543543 KLHL34Q8N239 644 aa13.14□□□□□ -0.31
HMBS-217ENST00000543543 NLGN2Q8NFZ4 835 aa13.14□□□□□ -0.31
HMBS-217ENST00000543543 ANTXR1Q9H6X2 564 aa13.14□□□□□ -0.31
HMBS-217ENST00000543543 DENND2AQ9ULE3 1009 aa13.14□□□□□ -0.31
HMBS-217ENST00000543543 PARP3Q9Y6F1 533 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms