RNA–Protein interactions for RNA: ENST00000543475.1

SMCR5-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 5, humanhuman

BASIC

Gene SMCR5, Length 2,844 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR5-201ENST00000543475 CCP110O43303 1012 aa14.58□□□□□ -0.08
SMCR5-201ENST00000543475 HMGB1P09429 215 aaKnown RBP14.58□□□□□ -0.08
SMCR5-201ENST00000543475 BRD2P25440 801 aaKnown RBP14.58□□□□□ -0.08
SMCR5-201ENST00000543475 ABTB2Q8N961 1025 aa14.58□□□□□ -0.08
SMCR5-201ENST00000543475 SLC26A8Q96RN1 970 aa14.58□□□□□ -0.08
SMCR5-201ENST00000543475 SEC62Q99442 399 aaKnown RBP14.58□□□□□ -0.08
SMCR5-201ENST00000543475 NDUFB9Q9Y6M9 179 aa14.58□□□□□ -0.08
SMCR5-201ENST00000543475 MED1Q15648 1581 aaPredicted RBP14.57□□□□□ -0.08
SMCR5-201ENST00000543475 TULP2O00295 520 aa14.57□□□□□ -0.08
SMCR5-201ENST00000543475 POLR3GO15318 223 aaPredicted RBP14.57□□□□□ -0.08
SMCR5-201ENST00000543475 NDUFA8P51970 172 aa14.57□□□□□ -0.08
SMCR5-201ENST00000543475 AIMP1Q12904 312 aaKnown RBP14.57□□□□□ -0.08
SMCR5-201ENST00000543475 SF3A1Q15459 793 aaKnown RBP14.57□□□□□ -0.08
SMCR5-201ENST00000543475 ADALQ6DHV7 355 aa14.57□□□□□ -0.08
SMCR5-201ENST00000543475 MPRIPQ6WCQ1 1025 aa14.57□□□□□ -0.08
SMCR5-201ENST00000543475 DHX32Q7L7V1 743 aaKnown RBP14.57□□□□□ -0.08
SMCR5-201ENST00000543475 TRERF1Q96PN7 1200 aa14.57□□□□□ -0.08
SMCR5-201ENST00000543475 BPIFA3Q9BQP9 254 aa14.57□□□□□ -0.08
SMCR5-201ENST00000543475 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.57□□□□□ -0.08
SMCR5-201ENST00000543475 ORC3Q9UBD5 711 aaPredicted RBP14.57□□□□□ -0.08
SMCR5-201ENST00000543475 BIN1O00499 593 aa14.57□□□□□ -0.08
SMCR5-201ENST00000543475 MCMDC2Q4G0Z9 681 aa14.57□□□□□ -0.08
SMCR5-201ENST00000543475 NCOA5Q9HCD5 579 aaKnown RBP14.57□□□□□ -0.08
SMCR5-201ENST00000543475 PHLPP2Q6ZVD8 1323 aa14.57□□□□□ -0.08
SMCR5-201ENST00000543475 ZRANB2O95218 330 aaKnown RBP eCLIP14.56□□□□□ -0.08
SMCR5-201ENST00000543475 DDX58O95786 925 aaKnown RBP14.56□□□□□ -0.08
SMCR5-201ENST00000543475 CHGBP05060 677 aa14.56□□□□□ -0.08
SMCR5-201ENST00000543475 ATP5JP18859 108 aa14.56□□□□□ -0.08
SMCR5-201ENST00000543475 STOX1Q6ZVD7 989 aa14.56□□□□□ -0.08
SMCR5-201ENST00000543475 C14orf37Q86TY3 774 aa14.56□□□□□ -0.08
SMCR5-201ENST00000543475 UTYO14607 1347 aa14.56□□□□□ -0.08
SMCR5-201ENST00000543475 ZNF609O15014 1411 aa14.56□□□□□ -0.08
SMCR5-201ENST00000543475 LAMA4Q16363 1823 aa14.56□□□□□ -0.08
SMCR5-201ENST00000543475 ZNF530Q6P9A1 599 aaPredicted RBP14.56□□□□□ -0.08
SMCR5-201ENST00000543475 ILDR1Q86SU0 546 aaPredicted RBP14.56□□□□□ -0.08
SMCR5-201ENST00000543475 HOMEZQ8IX15 550 aa14.56□□□□□ -0.08
SMCR5-201ENST00000543475 URI1O94763 535 aaPredicted RBP14.56□□□□□ -0.08
SMCR5-201ENST00000543475 SLC3A2P08195 630 aaKnown RBP14.56□□□□□ -0.08
SMCR5-201ENST00000543475 CAPN2P17655 700 aa14.56□□□□□ -0.08
SMCR5-201ENST00000543475 STK38Q15208 465 aa14.56□□□□□ -0.08
SMCR5-201ENST00000543475 SRRTQ9BXP5 876 aaKnown RBP14.56□□□□□ -0.08
SMCR5-201ENST00000543475 DBNLQ9UJU6 430 aaKnown RBP14.56□□□□□ -0.08
SMCR5-201ENST00000543475 TNRQ92752 1358 aa14.55□□□□□ -0.08
SMCR5-201ENST00000543475 A0A1W2PQ27 194 aa14.55□□□□□ -0.08
SMCR5-201ENST00000543475 A0A1W2PQ64 194 aa14.55□□□□□ -0.08
SMCR5-201ENST00000543475 A0A1W2PQD8 194 aa14.55□□□□□ -0.08
SMCR5-201ENST00000543475 LMOD1P29536 600 aaPredicted RBP14.55□□□□□ -0.08
SMCR5-201ENST00000543475 RTEL1Q9NZ71 1219 aa14.55□□□□□ -0.08
SMCR5-201ENST00000543475 AMOTL2Q9Y2J4 779 aa14.55□□□□□ -0.08
SMCR5-201ENST00000543475 SLIT1O75093 1534 aa14.55□□□□□ -0.08
SMCR5-201ENST00000543475 SLC20A2Q08357 652 aa14.55□□□□□ -0.08
SMCR5-201ENST00000543475 NBPF6Q5VWK0 638 aa14.55□□□□□ -0.08
SMCR5-201ENST00000543475 NBPF4Q96M43 638 aa14.55□□□□□ -0.08
SMCR5-201ENST00000543475 NCAPD2Q15021 1401 aa14.55□□□□□ -0.08
SMCR5-201ENST00000543475 PRAMEF22A3QJZ6 481 aa14.54□□□□□ -0.08
SMCR5-201ENST00000543475 TPM1P09493 284 aa14.54□□□□□ -0.08
SMCR5-201ENST00000543475 LTKP29376 864 aa14.54□□□□□ -0.08
SMCR5-201ENST00000543475 FANCCQ00597 558 aa14.54□□□□□ -0.08
SMCR5-201ENST00000543475 AKAP4Q5JQC9 854 aa14.54□□□□□ -0.08
SMCR5-201ENST00000543475 SEC31AO94979 1220 aaKnown RBP14.54□□□□□ -0.08
SMCR5-201ENST00000543475 NLRP12P59046 1061 aa14.54□□□□□ -0.08
SMCR5-201ENST00000543475 CARD6Q9BX69 1037 aa14.54□□□□□ -0.08
SMCR5-201ENST00000543475 TSPYL1Q9H0U9 437 aa14.54□□□□□ -0.08
SMCR5-201ENST00000543475 EFCAB8A8MWE9 144 aa14.53□□□□□ -0.08
SMCR5-201ENST00000543475 TADA3O75528 432 aa14.53□□□□□ -0.08
SMCR5-201ENST00000543475 TNNI3KQ59H18 835 aa14.53□□□□□ -0.08
SMCR5-201ENST00000543475 DDX46Q7L014 1031 aaKnown RBP14.53□□□□□ -0.08
SMCR5-201ENST00000543475 RIC3Q7Z5B4 369 aa14.53□□□□□ -0.08
SMCR5-201ENST00000543475 TXLNBQ8N3L3 684 aa14.53□□□□□ -0.08
SMCR5-201ENST00000543475 LINC00301Q8NCQ3 95 aa14.53□□□□□ -0.08
SMCR5-201ENST00000543475 NEK11Q8NG66 645 aa14.53□□□□□ -0.08
SMCR5-201ENST00000543475 KCNG4Q8TDN1 519 aa14.53□□□□□ -0.08
SMCR5-201ENST00000543475 FPGT-TNNI3KV9GXZ4 949 aa14.53□□□□□ -0.08
SMCR5-201ENST00000543475 SALL1Q9NSC2 1324 aa14.53□□□□□ -0.08
SMCR5-201ENST00000543475 UBR1Q8IWV7 1749 aa14.53□□□□□ -0.08
SMCR5-201ENST00000543475 CARMIL3Q8ND23 1372 aa14.53□□□□□ -0.08
SMCR5-201ENST00000543475 LRRFIP1Q32MZ4 808 aaKnown RBP14.53□□□□□ -0.08
SMCR5-201ENST00000543475 TRIM65Q6PJ69 517 aa14.53□□□□□ -0.08
SMCR5-201ENST00000543475 CLIC4Q9Y696 253 aa14.53□□□□□ -0.08
SMCR5-201ENST00000543475 RFX7Q2KHR2 1363 aa14.53□□□□□ -0.08
SMCR5-201ENST00000543475 PLEKHG1Q9ULL1 1385 aa14.53□□□□□ -0.08
SMCR5-201ENST00000543475 TFCP2Q12800 502 aa14.52□□□□□ -0.08
SMCR5-201ENST00000543475 NCAPHQ15003 741 aa14.52□□□□□ -0.08
SMCR5-201ENST00000543475 UTP14AQ9BVJ6 771 aaKnown RBP14.52□□□□□ -0.08
SMCR5-201ENST00000543475 DIP2AQ14689 1571 aa14.52□□□□□ -0.08
SMCR5-201ENST00000543475 ATP8B1O43520 1251 aa14.52□□□□□ -0.09
SMCR5-201ENST00000543475 ZNF202O95125 648 aa14.52□□□□□ -0.09
SMCR5-201ENST00000543475 POLR3DP05423 398 aaPredicted RBP14.52□□□□□ -0.09
SMCR5-201ENST00000543475 PDIA3P30101 505 aaKnown RBP14.52□□□□□ -0.09
SMCR5-201ENST00000543475 EVCP57679 992 aa14.52□□□□□ -0.09
SMCR5-201ENST00000543475 NEXNQ0ZGT2 675 aa14.52□□□□□ -0.09
SMCR5-201ENST00000543475 MAPK8IP2Q13387 824 aaPredicted RBP14.52□□□□□ -0.09
SMCR5-201ENST00000543475 CCDC158Q5M9N0 1113 aa14.52□□□□□ -0.09
SMCR5-201ENST00000543475 ISM2Q6H9L7 571 aa14.52□□□□□ -0.09
SMCR5-201ENST00000543475 CHMP4CQ96CF2 233 aa14.52□□□□□ -0.09
SMCR5-201ENST00000543475 MARF1Q9Y4F3 1742 aaKnown RBP14.52□□□□□ -0.09
SMCR5-201ENST00000543475 TSPOAP1O95153 1857 aa14.52□□□□□ -0.09
SMCR5-201ENST00000543475 ABCC6O95255 1503 aa14.52□□□□□ -0.09
SMCR5-201ENST00000543475 SPTLC2O15270 562 aa14.51□□□□□ -0.09
SMCR5-201ENST00000543475 IGKV5-2P06315 115 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms